RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 TCRBV7S2A1N4TA0A589 114 aa16.76■□□□□ 0.27
HMGCLL1-202ENST00000308161 OR2AG2A6NM03 316 aa16.76■□□□□ 0.27
HMGCLL1-202ENST00000308161 OR52A4PA6NMU1 304 aa16.76■□□□□ 0.27
HMGCLL1-202ENST00000308161 C9orf172C9J069 976 aa16.76■□□□□ 0.27
HMGCLL1-202ENST00000308161 FGF3P11487 239 aaPredicted RBP16.76■□□□□ 0.27
HMGCLL1-202ENST00000308161 TYRP1P17643 537 aa16.76■□□□□ 0.27
HMGCLL1-202ENST00000308161 IDSP22304 550 aa16.76■□□□□ 0.27
HMGCLL1-202ENST00000308161 ADRA1AP35348 466 aa16.76■□□□□ 0.27
HMGCLL1-202ENST00000308161 CLCNKAP51800 687 aa16.76■□□□□ 0.27
HMGCLL1-202ENST00000308161 CTSCP53634 463 aa16.76■□□□□ 0.27
HMGCLL1-202ENST00000308161 VAC14Q08AM6 782 aa16.76■□□□□ 0.27
HMGCLL1-202ENST00000308161 TRA2AQ13595 282 aaKnown RBP eCLIP16.76■□□□□ 0.27
HMGCLL1-202ENST00000308161 TAF1AQ15573 450 aaPredicted RBP16.76■□□□□ 0.27
HMGCLL1-202ENST00000308161 RANBP10Q6VN20 620 aa16.76■□□□□ 0.27
HMGCLL1-202ENST00000308161 RASGEF1AQ8N9B8 481 aa16.76■□□□□ 0.27
HMGCLL1-202ENST00000308161 AVL9Q8NBF6 648 aa16.76■□□□□ 0.27
HMGCLL1-202ENST00000308161 CCDC112Q8NEF3 446 aa16.76■□□□□ 0.27
HMGCLL1-202ENST00000308161 ZNF398Q8TD17 642 aa16.76■□□□□ 0.27
HMGCLL1-202ENST00000308161 NAT14Q8WUY8 206 aa16.76■□□□□ 0.27
HMGCLL1-202ENST00000308161 ART4Q93070 314 aa16.76■□□□□ 0.27
HMGCLL1-202ENST00000308161 PMEPA1Q969W9 287 aa16.76■□□□□ 0.27
HMGCLL1-202ENST00000308161 LRRC45Q96CN5 670 aa16.76■□□□□ 0.27
HMGCLL1-202ENST00000308161 FAM8A1Q9UBU6 413 aa16.76■□□□□ 0.27
HMGCLL1-202ENST00000308161 AHCTF1Q8WYP5 2266 aa16.76■□□□□ 0.27
HMGCLL1-202ENST00000308161 C5orf60A6NFR6 353 aa16.75■□□□□ 0.27
HMGCLL1-202ENST00000308161 EFCAB7A8K855 629 aa16.75■□□□□ 0.27
HMGCLL1-202ENST00000308161 GAPDHSO14556 408 aaPredicted RBP16.75■□□□□ 0.27
HMGCLL1-202ENST00000308161 PPFIA2O75334 1257 aa16.75■□□□□ 0.27
HMGCLL1-202ENST00000308161 LIPCP11150 499 aa16.75■□□□□ 0.27
HMGCLL1-202ENST00000308161 MSH3P20585 1137 aa16.75■□□□□ 0.27
HMGCLL1-202ENST00000308161 SLC19A1P41440 591 aa16.75■□□□□ 0.27
HMGCLL1-202ENST00000308161 EPHA4P54764 986 aa16.75■□□□□ 0.27
HMGCLL1-202ENST00000308161 UBE2IP63279 158 aaKnown RBP16.75■□□□□ 0.27
HMGCLL1-202ENST00000308161 SRSF6Q13247 344 aaKnown RBP16.75■□□□□ 0.27
HMGCLL1-202ENST00000308161 SQSTM1Q13501 440 aa16.75■□□□□ 0.27
HMGCLL1-202ENST00000308161 TAF1BQ53T94 588 aaPredicted RBP16.75■□□□□ 0.27
HMGCLL1-202ENST00000308161 TMEM220Q6QAJ8 160 aa16.75■□□□□ 0.27
HMGCLL1-202ENST00000308161 VASH2Q86V25 355 aa16.75■□□□□ 0.27
HMGCLL1-202ENST00000308161 AMZ2Q86W34 360 aa16.75■□□□□ 0.27
HMGCLL1-202ENST00000308161 DDHD1Q8NEL9 900 aa16.75■□□□□ 0.27
HMGCLL1-202ENST00000308161 OR13C4Q8NGS5 318 aa16.75■□□□□ 0.27
HMGCLL1-202ENST00000308161 ATG4AQ8WYN0 398 aa16.75■□□□□ 0.27
HMGCLL1-202ENST00000308161 CXorf40BQ96DE9 158 aa16.75■□□□□ 0.27
HMGCLL1-202ENST00000308161 HES6Q96HZ4 224 aa16.75■□□□□ 0.27
HMGCLL1-202ENST00000308161 PPP1R2P1Q96PQ5 205 aa16.75■□□□□ 0.27
HMGCLL1-202ENST00000308161 CCNL2Q96S94 520 aaPredicted RBP16.75■□□□□ 0.27
HMGCLL1-202ENST00000308161 TMEM121Q9BTD3 319 aa16.75■□□□□ 0.27
HMGCLL1-202ENST00000308161 ASB8Q9H765 288 aa16.75■□□□□ 0.27
HMGCLL1-202ENST00000308161 OCIAD1Q9NX40 245 aa16.75■□□□□ 0.27
HMGCLL1-202ENST00000308161 SLC39A1Q9NY26 324 aa16.75■□□□□ 0.27
HMGCLL1-202ENST00000308161 ZNF624Q9P2J8 865 aaPredicted RBP16.75■□□□□ 0.27
HMGCLL1-202ENST00000308161 PSMD13Q9UNM6 376 aa16.75■□□□□ 0.27
HMGCLL1-202ENST00000308161 PCDHB11Q9Y5F2 797 aa16.75■□□□□ 0.27
HMGCLL1-202ENST00000308161 CCL22O00626 93 aa16.74■□□□□ 0.27
HMGCLL1-202ENST00000308161 POP7O75817 140 aaKnown RBP16.74■□□□□ 0.27
HMGCLL1-202ENST00000308161 CRTAMO95727 393 aa16.74■□□□□ 0.27
HMGCLL1-202ENST00000308161 PRB1P04280 392 aa16.74■□□□□ 0.27
HMGCLL1-202ENST00000308161 BRAFP15056 766 aa16.74■□□□□ 0.27
HMGCLL1-202ENST00000308161 AMD1P17707 334 aa16.74■□□□□ 0.27
HMGCLL1-202ENST00000308161 HALP42357 657 aa16.74■□□□□ 0.27
HMGCLL1-202ENST00000308161 GDF10P55107 478 aa16.74■□□□□ 0.27
HMGCLL1-202ENST00000308161 GSDMDP57764 484 aa16.74■□□□□ 0.27
HMGCLL1-202ENST00000308161 KLF1Q13351 362 aaPredicted RBP16.74■□□□□ 0.27
HMGCLL1-202ENST00000308161 FNBP1LQ5T0N5 605 aa16.74■□□□□ 0.27
HMGCLL1-202ENST00000308161 SEL1L2Q5TEA6 688 aa16.74■□□□□ 0.27
HMGCLL1-202ENST00000308161 KIAA1614Q5VZ46 1190 aa16.74■□□□□ 0.27
HMGCLL1-202ENST00000308161 TMEM26Q6ZUK4 368 aa16.74■□□□□ 0.27
HMGCLL1-202ENST00000308161 C11orf96Q7Z7L8 435 aa16.74■□□□□ 0.27
HMGCLL1-202ENST00000308161 BEND7Q8N7W2 519 aaPredicted RBP16.74■□□□□ 0.27
HMGCLL1-202ENST00000308161 SLC39A7Q92504 469 aa16.74■□□□□ 0.27
HMGCLL1-202ENST00000308161 TAAR9Q96RI9 348 aa16.74■□□□□ 0.27
HMGCLL1-202ENST00000308161 TSGA10Q9BZW7 698 aa16.74■□□□□ 0.27
HMGCLL1-202ENST00000308161 FAM96AQ9H5X1 160 aa16.74■□□□□ 0.27
HMGCLL1-202ENST00000308161 PIH1D1Q9NWS0 290 aaKnown RBP16.74■□□□□ 0.27
HMGCLL1-202ENST00000308161 CRLS1Q9UJA2 301 aa16.74■□□□□ 0.27
HMGCLL1-202ENST00000308161 ATRXP46100 2492 aa16.74■□□□□ 0.27
HMGCLL1-202ENST00000308161 LILRA5A6NI73 299 aa16.73■□□□□ 0.27
HMGCLL1-202ENST00000308161 KRT86O43790 486 aa16.73■□□□□ 0.27
HMGCLL1-202ENST00000308161 ZNF189O75820 626 aaPredicted RBP16.73■□□□□ 0.27
HMGCLL1-202ENST00000308161 SRP72O76094 671 aaKnown RBP16.73■□□□□ 0.27
HMGCLL1-202ENST00000308161 METTL18O95568 372 aa16.73■□□□□ 0.27
HMGCLL1-202ENST00000308161 TPH1P17752 444 aa16.73■□□□□ 0.27
HMGCLL1-202ENST00000308161 XRCC1P18887 633 aaPredicted RBP16.73■□□□□ 0.27
HMGCLL1-202ENST00000308161 GFERP55789 205 aa16.73■□□□□ 0.27
HMGCLL1-202ENST00000308161 COL9A2Q14055 689 aaPredicted RBP16.73■□□□□ 0.27
HMGCLL1-202ENST00000308161 SEPT6Q14141 434 aa16.73■□□□□ 0.27
HMGCLL1-202ENST00000308161 NFE2L1Q14494 772 aa16.73■□□□□ 0.27
HMGCLL1-202ENST00000308161 LONRF2Q1L5Z9 754 aa16.73■□□□□ 0.27
HMGCLL1-202ENST00000308161 PARP6Q2NL67 630 aa16.73■□□□□ 0.27
HMGCLL1-202ENST00000308161 MANEAQ5SRI9 462 aa16.73■□□□□ 0.27
HMGCLL1-202ENST00000308161 WDR74Q6RFH5 385 aaPredicted RBP16.73■□□□□ 0.27
HMGCLL1-202ENST00000308161 RNF10Q8N5U6 811 aaKnown RBP16.73■□□□□ 0.27
HMGCLL1-202ENST00000308161 DTX3LQ8TDB6 740 aa16.73■□□□□ 0.27
HMGCLL1-202ENST00000308161 SGF29Q96ES7 293 aa16.73■□□□□ 0.27
HMGCLL1-202ENST00000308161 CTRCQ99895 268 aa16.73■□□□□ 0.27
HMGCLL1-202ENST00000308161 ACSL6Q9UKU0 697 aa16.73■□□□□ 0.27
HMGCLL1-202ENST00000308161 WDR37Q9Y2I8 494 aa16.73■□□□□ 0.27
HMGCLL1-202ENST00000308161 B3GALT1Q9Y5Z6 326 aa16.73■□□□□ 0.27
HMGCLL1-202ENST00000308161 SLC30A1Q9Y6M5 507 aa16.73■□□□□ 0.27
HMGCLL1-202ENST00000308161 K7ENP7 123 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms