RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 DENND5AQ6IQ26 1287 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 BLOC1S3Q6QNY0 202 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 GPSM1Q86YR5 675 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 RAVER1Q8IY67 606 aaKnown RBP12.91□□□□□ -0.34
TRIM35-201ENST00000305364 UTP15Q8TED0 518 aaKnown RBP12.91□□□□□ -0.34
TRIM35-201ENST00000305364 SGCDQ92629 289 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 TRIM63Q969Q1 353 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 FCRL5Q96RD9 977 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 SLC9A7Q96T83 725 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 GSTO2Q9H4Y5 243 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 AMBNQ9NP70 447 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 IGSF5Q9NSI5 407 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 CATSPERZQ9NTU4 200 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 UXTQ9UBK9 157 aaPredicted RBP12.91□□□□□ -0.34
TRIM35-201ENST00000305364 AFF4Q9UHB7 1163 aaKnown RBP12.91□□□□□ -0.34
TRIM35-201ENST00000305364 PKP3Q9Y446 797 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 ELOVL7A1L3X0 281 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 CD3EAPO15446 510 aaKnown RBP12.91□□□□□ -0.34
TRIM35-201ENST00000305364 MLYCDO95822 493 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 CCNCP24863 283 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 IDH2P48735 452 aaKnown RBP12.91□□□□□ -0.34
TRIM35-201ENST00000305364 TSNQ15631 228 aaKnown RBP12.91□□□□□ -0.34
TRIM35-201ENST00000305364 PHKG1Q16816 387 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 DCLRE1AQ6PJP8 1040 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 GOLM1Q8NBJ4 401 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 TMEM125Q96AQ2 219 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 DACT3Q96B18 629 aaPredicted RBP12.91□□□□□ -0.34
TRIM35-201ENST00000305364 TNFRSF12AQ9NP84 129 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 ERVK-18Q9QC07 812 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 LRFN2Q9ULH4 789 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 A6NL46 340 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 SEC22BO75396 215 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 SEC14L2O76054 403 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 POLR2IP36954 125 aaKnown RBP12.91□□□□□ -0.34
TRIM35-201ENST00000305364 ATP13A3Q9H7F0 1226 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 RPRD1BQ9NQG5 326 aaKnown RBP12.91□□□□□ -0.34
TRIM35-201ENST00000305364 ANKMY1Q9P2S6 941 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 ENPP5Q9UJA9 477 aa12.91□□□□□ -0.34
TRIM35-201ENST00000305364 ZNFX1Q9P2E3 1918 aaKnown RBP12.9□□□□□ -0.34
TRIM35-201ENST00000305364 SLC1A7O00341 560 aa12.9□□□□□ -0.34
TRIM35-201ENST00000305364 GGT5P36269 586 aa12.9□□□□□ -0.34
TRIM35-201ENST00000305364 PIK3CGP48736 1102 aa12.9□□□□□ -0.34
TRIM35-201ENST00000305364 AP5B1Q2VPB7 878 aa12.9□□□□□ -0.34
TRIM35-201ENST00000305364 TBPL2Q6SJ96 375 aa12.9□□□□□ -0.34
TRIM35-201ENST00000305364 SLC35B4Q969S0 331 aa12.9□□□□□ -0.34
TRIM35-201ENST00000305364 CGREF1Q99674 301 aa12.9□□□□□ -0.34
TRIM35-201ENST00000305364 TSEN34Q9BSV6 310 aaKnown RBP12.9□□□□□ -0.34
TRIM35-201ENST00000305364 PDGFDQ9GZP0 370 aaPredicted RBP12.9□□□□□ -0.34
TRIM35-201ENST00000305364 FAM124BQ9H5Z6 455 aaPredicted RBP12.9□□□□□ -0.34
TRIM35-201ENST00000305364 TBC1D14Q9P2M4 693 aa12.9□□□□□ -0.34
TRIM35-201ENST00000305364 NUP205Q92621 2012 aa12.9□□□□□ -0.34
TRIM35-201ENST00000305364 LOC110117498-PIK3R3F6TDL0 507 aa12.9□□□□□ -0.34
TRIM35-201ENST00000305364 RFPL2O75678 378 aa12.9□□□□□ -0.34
TRIM35-201ENST00000305364 CYP7B1O75881 506 aa12.9□□□□□ -0.34
TRIM35-201ENST00000305364 CYP11A1P05108 521 aa12.9□□□□□ -0.34
TRIM35-201ENST00000305364 HLA-DQB2P05538 268 aa12.9□□□□□ -0.34
TRIM35-201ENST00000305364 ZNF135P52742 658 aaPredicted RBP12.9□□□□□ -0.34
TRIM35-201ENST00000305364 TAF1CQ15572 869 aaPredicted RBP12.9□□□□□ -0.34
TRIM35-201ENST00000305364 SVOPLQ8N434 492 aa12.9□□□□□ -0.34
TRIM35-201ENST00000305364 CDK15Q96Q40 435 aa12.9□□□□□ -0.34
TRIM35-201ENST00000305364 TP63Q9H3D4 680 aaPredicted RBP12.9□□□□□ -0.34
TRIM35-201ENST00000305364 CCNB1IP1Q9NPC3 277 aa12.9□□□□□ -0.34
TRIM35-201ENST00000305364 SLAMF8Q9P0V8 285 aa12.9□□□□□ -0.34
TRIM35-201ENST00000305364 PCDHGA11Q9Y5H2 935 aa12.9□□□□□ -0.34
TRIM35-201ENST00000305364 NPEPPSL1A6NEC2 478 aa12.9□□□□□ -0.34
TRIM35-201ENST00000305364 CNTN5O94779 1100 aa12.9□□□□□ -0.34
TRIM35-201ENST00000305364 PCSK1P29120 753 aa12.9□□□□□ -0.34
TRIM35-201ENST00000305364 GRK3P35626 688 aa12.9□□□□□ -0.34
TRIM35-201ENST00000305364 DAOAP59103 153 aa12.9□□□□□ -0.34
TRIM35-201ENST00000305364 UBE3AQ05086 875 aa12.9□□□□□ -0.34
TRIM35-201ENST00000305364 GRIK4Q16099 956 aa12.9□□□□□ -0.34
TRIM35-201ENST00000305364 KIAA1841Q6NSI8 718 aa12.9□□□□□ -0.34
TRIM35-201ENST00000305364 HIPK1Q86Z02 1210 aa12.9□□□□□ -0.34
TRIM35-201ENST00000305364 LRRC49Q8IUZ0 686 aa12.9□□□□□ -0.34
TRIM35-201ENST00000305364 CRYBG2Q8N1P7 616 aa12.9□□□□□ -0.34
TRIM35-201ENST00000305364 OR13J1Q8NGT2 312 aa12.9□□□□□ -0.34
TRIM35-201ENST00000305364 CLHC1Q8NHS4 586 aa12.9□□□□□ -0.34
TRIM35-201ENST00000305364 LGALS12Q96DT0 336 aa12.9□□□□□ -0.34
TRIM35-201ENST00000305364 FCRL2Q96LA5 508 aaPredicted RBP12.9□□□□□ -0.34
TRIM35-201ENST00000305364 SLC39A8Q9C0K1 460 aa12.9□□□□□ -0.34
TRIM35-201ENST00000305364 FOCADQ5VW36 1801 aa12.9□□□□□ -0.34
TRIM35-201ENST00000305364 FAM234BA2RU67 622 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 A8MV72 311 aaPredicted RBP12.89□□□□□ -0.35
TRIM35-201ENST00000305364 CCRL2O00421 344 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 SLC26A3P40879 764 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 LEPRP48357 1165 aaKnown RBP12.89□□□□□ -0.35
TRIM35-201ENST00000305364 CSTF3Q12996 717 aaKnown RBP12.89□□□□□ -0.35
TRIM35-201ENST00000305364 PTPRNQ16849 979 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 ZNF549Q6P9A3 640 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 TPD52L3Q96J77 140 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 TRIM62Q9BVG3 475 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 LATS2Q9NRM7 1088 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 EVLQ9UI08 416 aaPredicted RBP12.89□□□□□ -0.35
TRIM35-201ENST00000305364 SAMHD1Q9Y3Z3 626 aaKnown RBP12.89□□□□□ -0.35
TRIM35-201ENST00000305364 SMIM28A0A1B0GU29 152 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 TTC24A2A3L6 582 aaPredicted RBP12.89□□□□□ -0.35
TRIM35-201ENST00000305364 MATN3O15232 486 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 UGT2B11O75310 529 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 BEST1O76090 585 aa12.89□□□□□ -0.35
TRIM35-201ENST00000305364 C22orf31O95567 290 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms