RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 LAG3P18627 525 aa20.59■□□□□ 0.89
LTBP3-201ENST00000301873 C2orf80Q0P641 193 aa20.59■□□□□ 0.89
LTBP3-201ENST00000301873 COX10Q12887 443 aa20.59■□□□□ 0.89
LTBP3-201ENST00000301873 CHSY3Q70JA7 882 aa20.59■□□□□ 0.89
LTBP3-201ENST00000301873 OR52J3Q8NH60 311 aa20.59■□□□□ 0.89
LTBP3-201ENST00000301873 FUBP3Q96I24 572 aaKnown RBP eCLIP20.59■□□□□ 0.89
LTBP3-201ENST00000301873 OR52B2Q96RD2 323 aa20.59■□□□□ 0.89
LTBP3-201ENST00000301873 DUX4Q9UBX2 424 aa20.59■□□□□ 0.89
LTBP3-201ENST00000301873 CORO2BQ9UQ03 480 aa20.59■□□□□ 0.89
LTBP3-201ENST00000301873 AP3D1O14617 1153 aa20.59■□□□□ 0.89
LTBP3-201ENST00000301873 PPIBP23284 216 aaKnown RBP20.59■□□□□ 0.89
LTBP3-201ENST00000301873 POU5F1Q01860 360 aaKnown RBP20.59■□□□□ 0.89
LTBP3-201ENST00000301873 CREMQ03060 361 aa20.59■□□□□ 0.89
LTBP3-201ENST00000301873 PRKD1Q15139 912 aaPredicted RBP20.59■□□□□ 0.89
LTBP3-201ENST00000301873 NPAS4Q8IUM7 802 aa20.59■□□□□ 0.89
LTBP3-201ENST00000301873 VANGL1Q8TAA9 524 aaPredicted RBP20.59■□□□□ 0.89
LTBP3-201ENST00000301873 BORCS6Q96GS4 357 aa20.59■□□□□ 0.89
LTBP3-201ENST00000301873 BCO2Q9BYV7 579 aa20.59■□□□□ 0.89
LTBP3-201ENST00000301873 FAM53CQ9NYF3 392 aa20.59■□□□□ 0.89
LTBP3-201ENST00000301873 SAMD4AQ9UPU9 718 aaKnown RBP20.59■□□□□ 0.89
LTBP3-201ENST00000301873 DYTNA2CJ06 578 aa20.58■□□□□ 0.89
LTBP3-201ENST00000301873 TP73O15350 636 aa20.58■□□□□ 0.89
LTBP3-201ENST00000301873 NIPSNAP2O75323 286 aa20.58■□□□□ 0.89
LTBP3-201ENST00000301873 OR6A2O95222 327 aa20.58■□□□□ 0.89
LTBP3-201ENST00000301873 IL6P05231 212 aa20.58■□□□□ 0.89
LTBP3-201ENST00000301873 MAGP20916 626 aa20.58■□□□□ 0.89
LTBP3-201ENST00000301873 GTF2H2Q13888 395 aa20.58■□□□□ 0.89
LTBP3-201ENST00000301873 GTF2H2CQ6P1K8 395 aa20.58■□□□□ 0.89
LTBP3-201ENST00000301873 KLHL17Q6TDP4 642 aa20.58■□□□□ 0.89
LTBP3-201ENST00000301873 TDRD1Q9BXT4 1180 aaKnown RBP20.58■□□□□ 0.89
LTBP3-201ENST00000301873 EQTNQ9NQ60 294 aa20.58■□□□□ 0.89
LTBP3-201ENST00000301873 SOHLH2Q9NX45 425 aa20.58■□□□□ 0.89
LTBP3-201ENST00000301873 CKMT2P17540 419 aa20.58■□□□□ 0.89
LTBP3-201ENST00000301873 AQP4P55087 323 aa20.58■□□□□ 0.89
LTBP3-201ENST00000301873 SRP54P61011 504 aaKnown RBP20.58■□□□□ 0.89
LTBP3-201ENST00000301873 BLMHQ13867 455 aa20.58■□□□□ 0.89
LTBP3-201ENST00000301873 SF1Q15637 639 aaKnown RBP20.58■□□□□ 0.89
LTBP3-201ENST00000301873 ZSWIM7Q19AV6 140 aa20.58■□□□□ 0.89
LTBP3-201ENST00000301873 FAM174BQ3ZCQ3 159 aa20.58■□□□□ 0.89
LTBP3-201ENST00000301873 TMEM63BQ5T3F8 832 aa20.58■□□□□ 0.89
LTBP3-201ENST00000301873 IZUMO1Q8IYV9 350 aa20.58■□□□□ 0.89
LTBP3-201ENST00000301873 SMG7Q92540 1137 aaKnown RBP20.58■□□□□ 0.89
LTBP3-201ENST00000301873 GMLQ99445 158 aa20.58■□□□□ 0.89
LTBP3-201ENST00000301873 SLIT2O94813 1529 aa20.58■□□□□ 0.89
LTBP3-201ENST00000301873 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.58■□□□□ 0.88
LTBP3-201ENST00000301873 ATG13O75143 517 aa20.58■□□□□ 0.88
LTBP3-201ENST00000301873 PTGER3P43115 390 aa20.58■□□□□ 0.88
LTBP3-201ENST00000301873 SMYD1Q8NB12 490 aa20.58■□□□□ 0.88
LTBP3-201ENST00000301873 AASDHPPTQ9NRN7 309 aa20.58■□□□□ 0.88
LTBP3-201ENST00000301873 PTGFRNQ9P2B2 879 aa20.58■□□□□ 0.88
LTBP3-201ENST00000301873 ZNF510Q9Y2H8 683 aa20.58■□□□□ 0.88
LTBP3-201ENST00000301873 MFHAS1Q9Y4C4 1052 aa20.58■□□□□ 0.88
LTBP3-201ENST00000301873 FFAR2O15552 330 aa20.58■□□□□ 0.88
LTBP3-201ENST00000301873 AHSGP02765 367 aa20.58■□□□□ 0.88
LTBP3-201ENST00000301873 PRKCGP05129 697 aa20.58■□□□□ 0.88
LTBP3-201ENST00000301873 UGT2B15P54855 530 aa20.58■□□□□ 0.88
LTBP3-201ENST00000301873 MLLT6P55198 1093 aaPredicted RBP20.58■□□□□ 0.88
LTBP3-201ENST00000301873 SMIM11AP58511 58 aa20.58■□□□□ 0.88
LTBP3-201ENST00000301873 AP1S1P61966 158 aa20.58■□□□□ 0.88
LTBP3-201ENST00000301873 KCNJ11Q14654 390 aa20.58■□□□□ 0.88
LTBP3-201ENST00000301873 TRIM71Q2Q1W2 868 aaKnown RBP20.58■□□□□ 0.88
LTBP3-201ENST00000301873 COMMD2Q86X83 199 aa20.58■□□□□ 0.88
LTBP3-201ENST00000301873 CROCCP3Q8IVE0 287 aa20.58■□□□□ 0.88
LTBP3-201ENST00000301873 ING5Q8WYH8 240 aa20.58■□□□□ 0.88
LTBP3-201ENST00000301873 PDP1Q9P0J1 537 aaPredicted RBP20.58■□□□□ 0.88
LTBP3-201ENST00000301873 J3KR12 359 aa20.57■□□□□ 0.88
LTBP3-201ENST00000301873 EOMESO95936 686 aa20.57■□□□□ 0.88
LTBP3-201ENST00000301873 EPHX1P07099 455 aa20.57■□□□□ 0.88
LTBP3-201ENST00000301873 RPS9P46781 194 aaKnown RBP20.57■□□□□ 0.88
LTBP3-201ENST00000301873 YAP1P46937 504 aaKnown RBP20.57■□□□□ 0.88
LTBP3-201ENST00000301873 DPYSQ14117 519 aa20.57■□□□□ 0.88
LTBP3-201ENST00000301873 CHST9Q7L1S5 443 aa20.57■□□□□ 0.88
LTBP3-201ENST00000301873 OR52L1Q8NGH7 329 aa20.57■□□□□ 0.88
LTBP3-201ENST00000301873 PYCR2Q96C36 320 aa20.57■□□□□ 0.88
LTBP3-201ENST00000301873 PIWIL1Q96J94 861 aaKnown RBP20.57■□□□□ 0.88
LTBP3-201ENST00000301873 INTS7Q9NVH2 962 aaKnown RBP20.57■□□□□ 0.88
LTBP3-201ENST00000301873 SMPD3Q9NY59 655 aaPredicted RBP20.57■□□□□ 0.88
LTBP3-201ENST00000301873 A0A1W2PQ67 120 aa20.57■□□□□ 0.88
LTBP3-201ENST00000301873 H0YC42 278 aa20.57■□□□□ 0.88
LTBP3-201ENST00000301873 GGT5P36269 586 aa20.57■□□□□ 0.88
LTBP3-201ENST00000301873 OSTM1Q86WC4 334 aa20.57■□□□□ 0.88
LTBP3-201ENST00000301873 ZNF607Q96SK3 696 aa20.57■□□□□ 0.88
LTBP3-201ENST00000301873 TBC1D14Q9P2M4 693 aa20.57■□□□□ 0.88
LTBP3-201ENST00000301873 SLC38A8A6NNN8 435 aa20.57■□□□□ 0.88
LTBP3-201ENST00000301873 TMEM233B4DJY2 109 aa20.57■□□□□ 0.88
LTBP3-201ENST00000301873 NPHS1O60500 1241 aa20.57■□□□□ 0.88
LTBP3-201ENST00000301873 TMCC2O75069 709 aa20.57■□□□□ 0.88
LTBP3-201ENST00000301873 ADH1CP00326 375 aa20.57■□□□□ 0.88
LTBP3-201ENST00000301873 ACTR3P61158 418 aa20.57■□□□□ 0.88
LTBP3-201ENST00000301873 ZNHIT3Q15649 155 aaPredicted RBP20.57■□□□□ 0.88
LTBP3-201ENST00000301873 CDKN2AIPNLQ96HQ2 116 aa20.57■□□□□ 0.88
LTBP3-201ENST00000301873 Q96MT0 163 aa20.57■□□□□ 0.88
LTBP3-201ENST00000301873 EBF2Q9HAK2 575 aa20.57■□□□□ 0.88
LTBP3-201ENST00000301873 PLGRKTQ9HBL7 147 aa20.57■□□□□ 0.88
LTBP3-201ENST00000301873 SLC2A6Q9UGQ3 507 aa20.57■□□□□ 0.88
LTBP3-201ENST00000301873 ZMYND8Q9ULU4 1186 aaPredicted RBP20.57■□□□□ 0.88
LTBP3-201ENST00000301873 SLC27A6Q9Y2P4 619 aa20.57■□□□□ 0.88
LTBP3-201ENST00000301873 H0YGN5 161 aa20.56■□□□□ 0.88
LTBP3-201ENST00000301873 NR2F6P10588 404 aa20.56■□□□□ 0.88
LTBP3-201ENST00000301873 CCNYL2Q5T2Q4 361 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms