RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 NCKAP1Q9Y2A7 1128 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 MAU2Q9Y6X3 613 aa12.26□□□□□ -0.45
ABCA3-201ENST00000301732 NEMP2A6NFY4 417 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 OR51F1A6NGY5 319 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 PIP5K1BO14986 540 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 SLC26A4O43511 780 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 PAGE1O75459 146 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 GABBR2O75899 941 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 DNASE1L1P49184 302 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 TTPAP49638 278 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 EFR3AQ14156 821 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 TLR1Q15399 786 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 EEF1DP3Q658K8 133 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 RAVER1Q8IY67 606 aaKnown RBP12.25□□□□□ -0.45
ABCA3-201ENST00000301732 COQ8BQ96D53 544 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 RPL10LQ96L21 214 aaKnown RBP12.25□□□□□ -0.45
ABCA3-201ENST00000301732 AGO3Q9H9G7 860 aaKnown RBP12.25□□□□□ -0.45
ABCA3-201ENST00000301732 TREM1Q9NP99 234 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 PCDHGC4Q9Y5F7 938 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 ST14Q9Y5Y6 855 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 FXYD6-FXYD2A0A087WZ82 144 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 H3BSA7 217 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 CSF2P04141 144 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 LGALS2P05162 132 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 CBLP22681 906 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 IDH3AP50213 366 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 ADGRE1Q14246 886 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 LRRC37A5PQ49AS3 106 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 MINDY4Q4G0A6 757 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 TMPRSS11AQ6ZMR5 421 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 MAP4K3Q8IVH8 894 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 TTC29Q8NA56 475 aaPredicted RBP12.25□□□□□ -0.45
ABCA3-201ENST00000301732 SLC43A3Q8NBI5 491 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 CD101Q93033 1021 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 VCPIP1Q96JH7 1222 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 FAIM2Q9BWQ8 316 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 FXYD6Q9H0Q3 95 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 ACSS3Q9H6R3 686 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 MED31Q9Y3C7 131 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 TRIM64CA6NLI5 447 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 I3L521 148 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 TUBG1P23258 451 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 SDC2P34741 201 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 UGT1A5P35504 534 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 NOMO3P69849 1222 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 SFSWAPQ12872 951 aaKnown RBP12.25□□□□□ -0.45
ABCA3-201ENST00000301732 OLIG2Q13516 323 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 NOMO1Q15155 1222 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 C4orf46Q504U0 113 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 NOMO2Q5JPE7 1267 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 NT5DC1Q5TFE4 455 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 SLC8B1Q6J4K2 584 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 OR10H5Q8NGA6 315 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 NODALQ96S42 347 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 ZNF607Q96SK3 696 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 TRMT61BQ9BVS5 477 aaKnown RBP12.25□□□□□ -0.45
ABCA3-201ENST00000301732 FKBP7Q9Y680 259 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 MAP3K4Q9Y6R4 1608 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 TBC1D3DA0A087WVF3 549 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 TBC1D3IA0A087WXS9 549 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 TBC1D3EA0A087X179 549 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 TBC1D3KA0A087X1G2 549 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 TBC1D3FA6NER0 549 aaPredicted RBP12.25□□□□□ -0.45
ABCA3-201ENST00000301732 TMEM233B4DJY2 109 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 TBC1D3LB9A6J9 549 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 TBC1D3HP0C7X1 549 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 CPN2P22792 545 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 CD52P31358 61 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 ARFIP1P53367 373 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 BNIP2Q12982 314 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 C9orf131Q5VYM1 1079 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 TBC1D3GQ6DHY5 549 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 TBC1D3CQ6IPX1 549 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 IRF2BP2Q7Z5L9 587 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 SNX29P2Q8IUI4 249 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 TBC1D3Q8IZP1 549 aaPredicted RBP12.25□□□□□ -0.45
ABCA3-201ENST00000301732 KCTD15Q96SI1 283 aaPredicted RBP12.25□□□□□ -0.45
ABCA3-201ENST00000301732 LRTM1Q9HBL6 345 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 MAGEE1Q9HCI5 957 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 IFT46Q9NQC8 304 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 PCDHGA10Q9Y5H3 936 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 FRMPD4Q14CM0 1322 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 EPHX2P34913 555 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 PSEN2P49810 448 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 ZNF155Q12901 538 aaPredicted RBP12.25□□□□□ -0.45
ABCA3-201ENST00000301732 ZNF267Q14586 743 aaPredicted RBP12.25□□□□□ -0.45
ABCA3-201ENST00000301732 GRHL3Q8TE85 626 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 CPXM1Q96SM3 734 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 LRRC19Q9H756 370 aa12.25□□□□□ -0.45
ABCA3-201ENST00000301732 STOX2Q9P2F5 926 aaPredicted RBP12.25□□□□□ -0.45
ABCA3-201ENST00000301732 KLRC4O43908 158 aa12.24□□□□□ -0.45
ABCA3-201ENST00000301732 SERPINB7O75635 380 aa12.24□□□□□ -0.45
ABCA3-201ENST00000301732 PSMA1P25786 263 aaKnown RBP12.24□□□□□ -0.45
ABCA3-201ENST00000301732 MCCD1P59942 119 aaPredicted RBP12.24□□□□□ -0.45
ABCA3-201ENST00000301732 SNRPD1P62314 119 aaKnown RBP12.24□□□□□ -0.45
ABCA3-201ENST00000301732 POLR2LP62875 67 aaKnown RBP12.24□□□□□ -0.45
ABCA3-201ENST00000301732 HMBOX1Q6NT76 420 aa12.24□□□□□ -0.45
ABCA3-201ENST00000301732 KLHL35Q6PF15 583 aa12.24□□□□□ -0.45
ABCA3-201ENST00000301732 CFAP206Q8IYR0 622 aa12.24□□□□□ -0.45
ABCA3-201ENST00000301732 ASB2Q96Q27 587 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms