RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 MKRN2Q9H000 416 aaKnown RBP14.29□□□□□ -0.12
CDT1-201ENST00000301019 INTS6Q9UL03 887 aaKnown RBP14.29□□□□□ -0.12
CDT1-201ENST00000301019 OGDHLQ9ULD0 1010 aa14.29□□□□□ -0.12
CDT1-201ENST00000301019 LOC100130705A0A1B0GUX0 176 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 SLCO1B7G3V0H7 640 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 SLC22A1O15245 554 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 PFKLP17858 780 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 GADD45AP24522 165 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 ARL4AP40617 200 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 BST2Q10589 180 aaKnown RBP14.28□□□□□ -0.12
CDT1-201ENST00000301019 SNTA1Q13424 505 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 IRF3Q14653 427 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 CES5AQ6NT32 575 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 KCTD17Q8N5Z5 321 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 ST8SIA2Q92186 375 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 TOP1MTQ969P6 601 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 GMCL1Q96IK5 515 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 GFM1Q96RP9 751 aaKnown RBP14.28□□□□□ -0.12
CDT1-201ENST00000301019 ACOX2Q99424 681 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 ACAT2Q9BWD1 397 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 SP140LQ9H930 580 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 SLC38A10Q9HBR0 1119 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 SEMA4BQ9NPR2 832 aaPredicted RBP14.28□□□□□ -0.12
CDT1-201ENST00000301019 GMIPQ9P107 970 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 AGO1Q9UL18 857 aaKnown RBP14.28□□□□□ -0.12
CDT1-201ENST00000301019 A0A0U1RQS6 177 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 I3L521 148 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 AIREO43918 545 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 FAM20BO75063 409 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 PRSS23O95084 383 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 POU3F3P20264 500 aaPredicted RBP14.28□□□□□ -0.12
CDT1-201ENST00000301019 HRH2P25021 359 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 DGKEP52429 567 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 DGKQP52824 942 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 CNTN2Q02246 1040 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 CELF3Q5SZQ8 465 aaKnown RBP14.28□□□□□ -0.12
CDT1-201ENST00000301019 ZNF517Q6ZMY9 492 aaPredicted RBP14.28□□□□□ -0.12
CDT1-201ENST00000301019 Q6ZPB1 254 aaPredicted RBP14.28□□□□□ -0.12
CDT1-201ENST00000301019 CDH24Q86UP0 819 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 SDR16C5Q8N3Y7 309 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 ZNF557Q8N988 423 aaPredicted RBP14.28□□□□□ -0.12
CDT1-201ENST00000301019 PNPT1Q8TCS8 783 aaKnown RBP14.28□□□□□ -0.12
CDT1-201ENST00000301019 KIF12Q96FN5 646 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 VMP1Q96GC9 406 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 MRPL45Q9BRJ2 306 aaKnown RBP14.28□□□□□ -0.12
CDT1-201ENST00000301019 BTBD2Q9BX70 525 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 KCNN3Q9UGI6 736 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 FNDC3AQ9Y2H6 1198 aaKnown RBP14.28□□□□□ -0.12
CDT1-201ENST00000301019 AGAP5A6NIR3 686 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 GABARAPO95166 117 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 ZNF250P15622 560 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 GPX3P22352 226 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 SSTR4P31391 388 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 LIPAP38571 399 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 CRISP3P54108 245 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 NKX3-2P78367 333 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 NAB1Q13506 487 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 SPDYE7PQ495Y7 208 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 BRMS1LQ5PSV4 323 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 DPY19L3Q6ZPD9 716 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 OTOP2Q7RTS6 562 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 LRRC20Q8TCA0 184 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 PPP1R13LQ8WUF5 828 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 CHAC2Q8WUX2 184 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 TMEM176AQ96HP8 235 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 MBOAT4Q96T53 435 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 TBCBQ99426 244 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 EXOSC4Q9NPD3 245 aaKnown RBP14.28□□□□□ -0.12
CDT1-201ENST00000301019 CRYL1Q9Y2S2 319 aa14.28□□□□□ -0.12
CDT1-201ENST00000301019 M0R129 80 aa14.27□□□□□ -0.12
CDT1-201ENST00000301019 DGAT1O75907 488 aa14.27□□□□□ -0.12
CDT1-201ENST00000301019 ENDOD1O94919 500 aa14.27□□□□□ -0.12
CDT1-201ENST00000301019 JCHAINP01591 159 aa14.27□□□□□ -0.12
CDT1-201ENST00000301019 TNNC2P02585 160 aa14.27□□□□□ -0.12
CDT1-201ENST00000301019 JUNBP17275 347 aaPredicted RBP14.27□□□□□ -0.12
CDT1-201ENST00000301019 NFKB1P19838 968 aa14.27□□□□□ -0.12
CDT1-201ENST00000301019 PCMT1P22061 227 aa14.27□□□□□ -0.12
CDT1-201ENST00000301019 YWHAHQ04917 246 aaPredicted RBP14.27□□□□□ -0.12
CDT1-201ENST00000301019 CHRNB3Q05901 458 aa14.27□□□□□ -0.12
CDT1-201ENST00000301019 STXBP2Q15833 593 aa14.27□□□□□ -0.12
CDT1-201ENST00000301019 CCDC85BQ15834 202 aaPredicted RBP14.27□□□□□ -0.12
CDT1-201ENST00000301019 LRRC26Q2I0M4 334 aa14.27□□□□□ -0.12
CDT1-201ENST00000301019 SPANXN3Q5MJ09 141 aa14.27□□□□□ -0.12
CDT1-201ENST00000301019 ZNF544Q6NX49 715 aa14.27□□□□□ -0.12
CDT1-201ENST00000301019 DET1Q7L5Y6 550 aa14.27□□□□□ -0.12
CDT1-201ENST00000301019 TIGD4Q8IY51 512 aa14.27□□□□□ -0.12
CDT1-201ENST00000301019 FAM109AQ8N4B1 249 aa14.27□□□□□ -0.12
CDT1-201ENST00000301019 ANKRD49Q8WVL7 239 aa14.27□□□□□ -0.12
CDT1-201ENST00000301019 RTP4Q96DX8 246 aa14.27□□□□□ -0.12
CDT1-201ENST00000301019 QKIQ96PU8 341 aaKnown RBP eCLIP14.27□□□□□ -0.12
CDT1-201ENST00000301019 OR51E2Q9H255 320 aa14.27□□□□□ -0.12
CDT1-201ENST00000301019 CNTN6Q9UQ52 1028 aa14.27□□□□□ -0.12
CDT1-201ENST00000301019 HSPB11Q9Y547 144 aa14.27□□□□□ -0.12
CDT1-201ENST00000301019 GSTA4O15217 222 aa14.27□□□□□ -0.13
CDT1-201ENST00000301019 ERCC2P18074 760 aa14.27□□□□□ -0.13
CDT1-201ENST00000301019 MAP3K7CLP57077 242 aa14.27□□□□□ -0.13
CDT1-201ENST00000301019 RAB10P61026 200 aa14.27□□□□□ -0.13
CDT1-201ENST00000301019 GHRHRQ02643 423 aa14.27□□□□□ -0.13
CDT1-201ENST00000301019 DBPQ10586 325 aaPredicted RBP14.27□□□□□ -0.13
CDT1-201ENST00000301019 PPP1R26Q5T8A7 1209 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms