RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 RPS3P23396 243 aaKnown RBP eCLIP24.78■■□□□ 1.56
ROM1-201ENST00000278833 GATMP50440 423 aa24.78■■□□□ 1.56
ROM1-201ENST00000278833 SGSHP51688 502 aa24.78■■□□□ 1.56
ROM1-201ENST00000278833 DIO3P55073 304 aa24.78■■□□□ 1.56
ROM1-201ENST00000278833 BFSP2Q13515 415 aa24.78■■□□□ 1.56
ROM1-201ENST00000278833 ATP6AP1Q15904 470 aa24.78■■□□□ 1.56
ROM1-201ENST00000278833 KCTD21Q4G0X4 260 aa24.78■■□□□ 1.56
ROM1-201ENST00000278833 PITRM1Q5JRX3 1037 aa24.78■■□□□ 1.56
ROM1-201ENST00000278833 SPRED1Q7Z699 444 aa24.78■■□□□ 1.56
ROM1-201ENST00000278833 TRPV3Q8NET8 790 aa24.78■■□□□ 1.56
ROM1-201ENST00000278833 DBF4BQ8NFT6 615 aa24.78■■□□□ 1.56
ROM1-201ENST00000278833 GRIN3AQ8TCU5 1115 aa24.78■■□□□ 1.56
ROM1-201ENST00000278833 TRMT2BQ96GJ1 504 aaKnown RBP24.78■■□□□ 1.56
ROM1-201ENST00000278833 CENPNQ96H22 339 aaPredicted RBP24.78■■□□□ 1.56
ROM1-201ENST00000278833 ZNF512Q96ME7 567 aaPredicted RBP24.78■■□□□ 1.56
ROM1-201ENST00000278833 KLF16Q9BXK1 252 aaPredicted RBP24.78■■□□□ 1.56
ROM1-201ENST00000278833 GRIP2Q9C0E4 1043 aa24.78■■□□□ 1.56
ROM1-201ENST00000278833 NACA2Q9H009 215 aa24.78■■□□□ 1.56
ROM1-201ENST00000278833 TUBA8Q9NY65 449 aaPredicted RBP24.78■■□□□ 1.56
ROM1-201ENST00000278833 GMPR2Q9P2T1 348 aaKnown RBP24.78■■□□□ 1.56
ROM1-201ENST00000278833 TBX21Q9UL17 535 aa24.78■■□□□ 1.56
ROM1-201ENST00000278833 LRFN2Q9ULH4 789 aa24.78■■□□□ 1.56
ROM1-201ENST00000278833 MYRFQ9Y2G1 1151 aa24.78■■□□□ 1.56
ROM1-201ENST00000278833 TRIM43BA6NCK2 446 aa24.77■■□□□ 1.56
ROM1-201ENST00000278833 TRIM64A6NGJ6 449 aa24.77■■□□□ 1.56
ROM1-201ENST00000278833 IFRD1O00458 451 aaPredicted RBP24.77■■□□□ 1.56
ROM1-201ENST00000278833 GIPC1O14908 333 aa24.77■■□□□ 1.56
ROM1-201ENST00000278833 AKAP10O43572 662 aa24.77■■□□□ 1.56
ROM1-201ENST00000278833 SLC22A3O75751 556 aa24.77■■□□□ 1.56
ROM1-201ENST00000278833 TMCC1O94876 653 aa24.77■■□□□ 1.56
ROM1-201ENST00000278833 FASP25445 335 aa24.77■■□□□ 1.56
ROM1-201ENST00000278833 GSK3BP49841 420 aa24.77■■□□□ 1.56
ROM1-201ENST00000278833 CDKN1CP49918 316 aaPredicted RBP24.77■■□□□ 1.56
ROM1-201ENST00000278833 CLCN7P51798 805 aa24.77■■□□□ 1.56
ROM1-201ENST00000278833 CACNG1Q06432 222 aa24.77■■□□□ 1.56
ROM1-201ENST00000278833 NFYCQ13952 458 aa24.77■■□□□ 1.56
ROM1-201ENST00000278833 EML3Q32P44 896 aa24.77■■□□□ 1.56
ROM1-201ENST00000278833 CERS6Q6ZMG9 384 aa24.77■■□□□ 1.56
ROM1-201ENST00000278833 SIDT2Q8NBJ9 832 aaKnown RBP24.77■■□□□ 1.56
ROM1-201ENST00000278833 TSPAN14Q8NG11 270 aa24.77■■□□□ 1.56
ROM1-201ENST00000278833 SEPT8Q92599 483 aa24.77■■□□□ 1.56
ROM1-201ENST00000278833 PPWD1Q96BP3 646 aaKnown RBP24.77■■□□□ 1.56
ROM1-201ENST00000278833 TRIM43Q96BQ3 446 aaPredicted RBP24.77■■□□□ 1.56
ROM1-201ENST00000278833 EXOC2Q96KP1 924 aa24.77■■□□□ 1.56
ROM1-201ENST00000278833 TMEM79Q9BSE2 394 aa24.77■■□□□ 1.56
ROM1-201ENST00000278833 OLAHQ9NV23 265 aa24.77■■□□□ 1.56
ROM1-201ENST00000278833 IL17CQ9P0M4 197 aa24.77■■□□□ 1.56
ROM1-201ENST00000278833 PTBP2Q9UKA9 531 aaKnown RBP24.77■■□□□ 1.56
ROM1-201ENST00000278833 DHRS7Q9Y394 339 aa24.77■■□□□ 1.56
ROM1-201ENST00000278833 TNPO3Q9Y5L0 923 aaKnown RBP24.77■■□□□ 1.56
ROM1-201ENST00000278833 SCN8AQ9UQD0 1980 aa24.77■■□□□ 1.56
ROM1-201ENST00000278833 ENO2P09104 434 aaPredicted RBP24.77■■□□□ 1.56
ROM1-201ENST00000278833 HTR1EP28566 365 aa24.77■■□□□ 1.56
ROM1-201ENST00000278833 AGTR2P50052 363 aa24.77■■□□□ 1.56
ROM1-201ENST00000278833 CCT8P50990 548 aa24.77■■□□□ 1.56
ROM1-201ENST00000278833 NME5P56597 212 aa24.77■■□□□ 1.56
ROM1-201ENST00000278833 MLLT1Q03111 559 aaPredicted RBP24.77■■□□□ 1.56
ROM1-201ENST00000278833 AASDHQ4L235 1098 aaPredicted RBP24.77■■□□□ 1.56
ROM1-201ENST00000278833 AP1ARQ63HQ0 302 aa24.77■■□□□ 1.56
ROM1-201ENST00000278833 PRSS55Q6UWB4 352 aaPredicted RBP24.77■■□□□ 1.56
ROM1-201ENST00000278833 ADAMTSL2Q86TH1 951 aa24.77■■□□□ 1.56
ROM1-201ENST00000278833 ZFAND4Q86XD8 727 aa24.77■■□□□ 1.56
ROM1-201ENST00000278833 EPHX4Q8IUS5 362 aa24.77■■□□□ 1.56
ROM1-201ENST00000278833 BCL7CQ8WUZ0 217 aaPredicted RBP24.77■■□□□ 1.56
ROM1-201ENST00000278833 ALG2Q9H553 416 aa24.77■■□□□ 1.56
ROM1-201ENST00000278833 AFF4Q9UHB7 1163 aaKnown RBP24.77■■□□□ 1.56
ROM1-201ENST00000278833 TIMM22Q9Y584 194 aa24.77■■□□□ 1.56
ROM1-201ENST00000278833 SOCS2O14508 198 aa24.76■■□□□ 1.55
ROM1-201ENST00000278833 PRDX3P30048 256 aaKnown RBP24.76■■□□□ 1.55
ROM1-201ENST00000278833 PPP3CCP48454 512 aa24.76■■□□□ 1.55
ROM1-201ENST00000278833 RNF219Q5W0B1 726 aaPredicted RBP24.76■■□□□ 1.55
ROM1-201ENST00000278833 TAS1R1Q7RTX1 841 aa24.76■■□□□ 1.55
ROM1-201ENST00000278833 TMEM173Q86WV6 379 aaPredicted RBP24.76■■□□□ 1.55
ROM1-201ENST00000278833 OR2T11Q8NH01 316 aa24.76■■□□□ 1.55
ROM1-201ENST00000278833 EEF1AKMT1Q8WVE0 214 aa24.76■■□□□ 1.55
ROM1-201ENST00000278833 ISG20Q96AZ6 181 aaKnown RBP24.76■■□□□ 1.55
ROM1-201ENST00000278833 PLEKHG4BQ96PX9 1271 aa24.76■■□□□ 1.55
ROM1-201ENST00000278833 MAGEE1Q9HCI5 957 aa24.76■■□□□ 1.55
ROM1-201ENST00000278833 TRPM5Q9NZQ8 1165 aa24.76■■□□□ 1.55
ROM1-201ENST00000278833 PCDHGC4Q9Y5F7 938 aa24.76■■□□□ 1.55
ROM1-201ENST00000278833 ANAPC1Q9H1A4 1944 aa24.76■■□□□ 1.55
ROM1-201ENST00000278833 CCDC154A6NI56 674 aa24.75■■□□□ 1.55
ROM1-201ENST00000278833 CBX4O00257 560 aa24.75■■□□□ 1.55
ROM1-201ENST00000278833 ARNTLO00327 626 aa24.75■■□□□ 1.55
ROM1-201ENST00000278833 DLGAP1O14490 977 aa24.75■■□□□ 1.55
ROM1-201ENST00000278833 ETS2P15036 469 aa24.75■■□□□ 1.55
ROM1-201ENST00000278833 MYF6P23409 242 aa24.75■■□□□ 1.55
ROM1-201ENST00000278833 ITGB8P26012 769 aa24.75■■□□□ 1.55
ROM1-201ENST00000278833 POLR2JP52435 117 aaKnown RBP24.75■■□□□ 1.55
ROM1-201ENST00000278833 CAPRIN1Q14444 709 aaKnown RBP24.75■■□□□ 1.55
ROM1-201ENST00000278833 TGFBIQ15582 683 aa24.75■■□□□ 1.55
ROM1-201ENST00000278833 RBBP7Q16576 425 aa24.75■■□□□ 1.55
ROM1-201ENST00000278833 C6orf136Q5SQH8 315 aa24.75■■□□□ 1.55
ROM1-201ENST00000278833 TMTC4Q5T4D3 741 aa24.75■■□□□ 1.55
ROM1-201ENST00000278833 LRRC43Q8N309 656 aa24.75■■□□□ 1.55
ROM1-201ENST00000278833 CARNMT1Q8N4J0 409 aa24.75■■□□□ 1.55
ROM1-201ENST00000278833 PDPRQ8NCN5 879 aa24.75■■□□□ 1.55
ROM1-201ENST00000278833 ZFP28Q8NHY6 868 aa24.75■■□□□ 1.55
ROM1-201ENST00000278833 RMND5BQ96G75 393 aaPredicted RBP24.75■■□□□ 1.55
ROM1-201ENST00000278833 DNMT3BQ9UBC3 853 aaKnown RBP24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms