RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 GPR45Q9Y5Y3 372 aa12.8□□□□□ -0.36
C9orf3-201ENST00000277198 MYLKQ15746 1914 aa12.8□□□□□ -0.36
C9orf3-201ENST00000277198 UBXN8O00124 270 aa12.8□□□□□ -0.36
C9orf3-201ENST00000277198 PFDN6O15212 129 aa12.8□□□□□ -0.36
C9orf3-201ENST00000277198 CHEK2O96017 543 aa12.8□□□□□ -0.36
C9orf3-201ENST00000277198 SLC4A1P02730 911 aa12.8□□□□□ -0.36
C9orf3-201ENST00000277198 SOD2P04179 222 aa12.8□□□□□ -0.36
C9orf3-201ENST00000277198 RPS17P08708 135 aaKnown RBP12.8□□□□□ -0.36
C9orf3-201ENST00000277198 ARSAP15289 507 aa12.8□□□□□ -0.36
C9orf3-201ENST00000277198 RPL17P18621 184 aaKnown RBP12.8□□□□□ -0.36
C9orf3-201ENST00000277198 TSPAN8P19075 237 aa12.8□□□□□ -0.36
C9orf3-201ENST00000277198 OR1E1P30953 314 aa12.8□□□□□ -0.36
C9orf3-201ENST00000277198 SLC5A2P31639 672 aa12.8□□□□□ -0.36
C9orf3-201ENST00000277198 RAD51Q06609 339 aa12.8□□□□□ -0.36
C9orf3-201ENST00000277198 EFEMP1Q12805 493 aa12.8□□□□□ -0.36
C9orf3-201ENST00000277198 RCAN2Q14206 197 aa12.8□□□□□ -0.36
C9orf3-201ENST00000277198 C5orf22Q49AR2 442 aa12.8□□□□□ -0.36
C9orf3-201ENST00000277198 VPS26BQ4G0F5 336 aa12.8□□□□□ -0.36
C9orf3-201ENST00000277198 TMTC4Q5T4D3 741 aa12.8□□□□□ -0.36
C9orf3-201ENST00000277198 AFTPHQ6ULP2 937 aa12.8□□□□□ -0.36
C9orf3-201ENST00000277198 DDIASQ8IXT1 998 aa12.8□□□□□ -0.36
C9orf3-201ENST00000277198 FBXO39Q8N4B4 442 aa12.8□□□□□ -0.36
C9orf3-201ENST00000277198 NKAPQ8N5F7 415 aaKnown RBP12.8□□□□□ -0.36
C9orf3-201ENST00000277198 PAPD5Q8NDF8 572 aaKnown RBP12.8□□□□□ -0.36
C9orf3-201ENST00000277198 TRPV3Q8NET8 790 aa12.8□□□□□ -0.36
C9orf3-201ENST00000277198 BLOC1S5Q8TDH9 187 aa12.8□□□□□ -0.36
C9orf3-201ENST00000277198 EZH1Q92800 747 aaPredicted RBP12.8□□□□□ -0.36
C9orf3-201ENST00000277198 CDKN2AIPNLQ96HQ2 116 aa12.8□□□□□ -0.36
C9orf3-201ENST00000277198 RPRD1AQ96P16 312 aaPredicted RBP12.8□□□□□ -0.36
C9orf3-201ENST00000277198 HERC2P3Q9BVR0 1158 aa12.8□□□□□ -0.36
C9orf3-201ENST00000277198 CCDC68Q9H2F9 335 aa12.8□□□□□ -0.36
C9orf3-201ENST00000277198 TUBB1Q9H4B7 451 aa12.8□□□□□ -0.36
C9orf3-201ENST00000277198 CAAP1Q9H8G2 361 aa12.8□□□□□ -0.36
C9orf3-201ENST00000277198 PDFQ9HBH1 243 aa12.8□□□□□ -0.36
C9orf3-201ENST00000277198 TLR8Q9NR97 1041 aaKnown RBP12.8□□□□□ -0.36
C9orf3-201ENST00000277198 GMIPQ9P107 970 aa12.8□□□□□ -0.36
C9orf3-201ENST00000277198 POLG2Q9UHN1 485 aa12.8□□□□□ -0.36
C9orf3-201ENST00000277198 ARL5AQ9Y689 179 aa12.8□□□□□ -0.36
C9orf3-201ENST00000277198 A0A1B0GVG6 124 aa12.79□□□□□ -0.36
C9orf3-201ENST00000277198 H3BMM5 538 aa12.79□□□□□ -0.36
C9orf3-201ENST00000277198 H3BSA7 217 aa12.79□□□□□ -0.36
C9orf3-201ENST00000277198 SOCS2O14508 198 aa12.79□□□□□ -0.36
C9orf3-201ENST00000277198 SOAT2O75908 522 aa12.79□□□□□ -0.36
C9orf3-201ENST00000277198 SIX3O95343 332 aaPredicted RBP12.79□□□□□ -0.36
C9orf3-201ENST00000277198 PYGLP06737 847 aa12.79□□□□□ -0.36
C9orf3-201ENST00000277198 OR4Q2P0C623 313 aa12.79□□□□□ -0.36
C9orf3-201ENST00000277198 CKMT2P17540 419 aa12.79□□□□□ -0.36
C9orf3-201ENST00000277198 CES1P23141 567 aa12.79□□□□□ -0.36
C9orf3-201ENST00000277198 TTKP33981 857 aa12.79□□□□□ -0.36
C9orf3-201ENST00000277198 CCT8P50990 548 aa12.79□□□□□ -0.36
C9orf3-201ENST00000277198 ESRRGP62508 458 aa12.79□□□□□ -0.36
C9orf3-201ENST00000277198 DDR2Q16832 855 aa12.79□□□□□ -0.36
C9orf3-201ENST00000277198 RTP2Q5QGT7 225 aa12.79□□□□□ -0.36
C9orf3-201ENST00000277198 RAP1GAP2Q684P5 730 aa12.79□□□□□ -0.36
C9orf3-201ENST00000277198 PRSS55Q6UWB4 352 aaPredicted RBP12.79□□□□□ -0.36
C9orf3-201ENST00000277198 SPRED1Q7Z699 444 aa12.79□□□□□ -0.36
C9orf3-201ENST00000277198 RYBPQ8N488 228 aaPredicted RBP12.79□□□□□ -0.36
C9orf3-201ENST00000277198 CHCHD4Q8N4Q1 142 aa12.79□□□□□ -0.36
C9orf3-201ENST00000277198 FAM81AQ8TBF8 368 aa12.79□□□□□ -0.36
C9orf3-201ENST00000277198 TRIB3Q96RU7 358 aa12.79□□□□□ -0.36
C9orf3-201ENST00000277198 MGME1Q9BQP7 344 aa12.79□□□□□ -0.36
C9orf3-201ENST00000277198 SLC39A3Q9BRY0 314 aa12.79□□□□□ -0.36
C9orf3-201ENST00000277198 BRINP2Q9C0B6 783 aa12.79□□□□□ -0.36
C9orf3-201ENST00000277198 CMTM6Q9NX76 183 aa12.79□□□□□ -0.36
C9orf3-201ENST00000277198 MARCH2Q9P0N8 246 aa12.79□□□□□ -0.36
C9orf3-201ENST00000277198 RNF112Q9ULX5 631 aa12.79□□□□□ -0.36
C9orf3-201ENST00000277198 CCL22O00626 93 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 TEX28O15482 410 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 EEDO75530 441 aaKnown RBP12.78□□□□□ -0.36
C9orf3-201ENST00000277198 CRCPO75575 148 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 RASAL1O95294 804 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 ESRRBO95718 433 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 MT-CO1P00395 513 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 CYBBP04839 570 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 SPATA31D3P0C874 917 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 UROSP10746 265 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 FGFR3P22607 806 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 FOXA1P55317 472 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 EEFSECP57772 596 aaKnown RBP12.78□□□□□ -0.36
C9orf3-201ENST00000277198 KCNK10P57789 538 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 MERTKQ12866 999 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 SMAD4Q13485 552 aaKnown RBP12.78□□□□□ -0.36
C9orf3-201ENST00000277198 GRB7Q14451 532 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 SEMA3AQ14563 771 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 ATP6AP1Q15904 470 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 FXNQ16595 210 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 PDCD4Q53EL6 469 aaKnown RBP12.78□□□□□ -0.36
C9orf3-201ENST00000277198 ANKRD54Q6NXT1 300 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 SPATA31D4Q6ZUB0 917 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 TBC1D21Q8IYX1 336 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 ADGRG5Q8IZF4 528 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 CBR4Q8N4T8 237 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 FAM47BQ8NA70 645 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 B4GALNT2Q8NHY0 566 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 SLC22A17Q8WUG5 538 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 CDCA3Q99618 268 aaPredicted RBP12.78□□□□□ -0.36
C9orf3-201ENST00000277198 ADI1Q9BV57 179 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 YTHDF1Q9BYJ9 559 aaKnown RBP12.78□□□□□ -0.36
C9orf3-201ENST00000277198 MAGEH1Q9H213 219 aa12.78□□□□□ -0.36
C9orf3-201ENST00000277198 S1PR5Q9H228 398 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms