RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 GTF2IRD2BQ6EKJ0 949 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 FAM171BQ6P995 826 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 GTF2IRD2Q86UP8 949 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 CEP97Q8IW35 865 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 MFSD6LQ8IWD5 586 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 SNX31Q8N9S9 440 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 OR6B3Q8NGW1 331 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 C2orf15Q8WU43 125 aaKnown RBP10.24□□□□□ -0.77
UPF3B-201ENST00000276201 HEXDCQ8WVB3 486 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 OSCP1Q8WVF1 389 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 TSPAN17Q96FV3 270 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 MYADMQ96S97 322 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 SEPT5Q99719 369 aaPredicted RBP10.24□□□□□ -0.77
UPF3B-201ENST00000276201 LPIN3Q9BQK8 851 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 CORO1BQ9BR76 489 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 MUC3BQ9H195 1237 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 DPEP3Q9H4B8 488 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 GSTO2Q9H4Y5 243 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 MAP10Q9P2G4 905 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 TRAF6Q9Y4K3 522 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 PCDHB5Q9Y5E4 795 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 PCDHA9Q9Y5H5 950 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 DOCK8Q8NF50 2099 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 NRG2O14511 850 aaPredicted RBP10.24□□□□□ -0.77
UPF3B-201ENST00000276201 ABCB7O75027 752 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 CNOT3O75175 753 aaKnown RBP10.24□□□□□ -0.77
UPF3B-201ENST00000276201 VPS4BO75351 444 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 PRSS23O95084 383 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 HPRP00739 348 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 UGT2B4P06133 528 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 RHOP08100 348 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 LTA4HP09960 611 aaKnown RBP10.24□□□□□ -0.77
UPF3B-201ENST00000276201 HAPLN1P10915 354 aaPredicted RBP10.24□□□□□ -0.77
UPF3B-201ENST00000276201 PAMP19021 973 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 CD247P20963 164 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 FSHRP23945 695 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 GSTM2P28161 218 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 ABCG1P45844 678 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 RPS9P46781 194 aaKnown RBP10.24□□□□□ -0.77
UPF3B-201ENST00000276201 GLRBP48167 497 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 CCR3P51677 355 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 CLCN5P51795 746 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 EEFSECP57772 596 aaKnown RBP10.24□□□□□ -0.77
UPF3B-201ENST00000276201 TNK2Q07912 1038 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 ACAP2Q15057 778 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 NFE2Q16621 373 aaPredicted RBP10.24□□□□□ -0.77
UPF3B-201ENST00000276201 PRR23BQ6ZRT6 265 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 GET4Q7L5D6 327 aaPredicted RBP10.24□□□□□ -0.77
UPF3B-201ENST00000276201 OTOP3Q7RTS5 596 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 PTAR1Q7Z6K3 402 aaPredicted RBP10.24□□□□□ -0.77
UPF3B-201ENST00000276201 RETREG3Q86VR2 466 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 RNF135Q8IUD6 432 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 ZNF513Q8N8E2 541 aaPredicted RBP10.24□□□□□ -0.77
UPF3B-201ENST00000276201 GABPB2Q8TAK5 448 aaPredicted RBP10.24□□□□□ -0.77
UPF3B-201ENST00000276201 ITFG1Q8TB96 612 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 HDAC10Q969S8 669 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 MOCOSQ96EN8 888 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 VMP1Q96GC9 406 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 CCDC138Q96M89 665 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 FCRL5Q96RD9 977 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 CEP41Q9BYV8 373 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 ANLNQ9NQW6 1124 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 TREX1Q9NSU2 369 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 CCDC167Q9P0B6 97 aa10.24□□□□□ -0.77
UPF3B-201ENST00000276201 RNF103-CHMP3A0A140T963 221 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 FXYD1O00168 92 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 KCNK1O00180 336 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 USP12O75317 370 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 NPPAP01160 153 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 LCP1P13796 627 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 ATF6P18850 670 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 TAS2R39P59534 338 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 BNIP3Q12983 259 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 PLD1Q13393 1074 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 OLIG2Q13516 323 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 CRY1Q16526 586 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 UGT3A2Q3SY77 523 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 AASDHQ4L235 1098 aaPredicted RBP10.23□□□□□ -0.77
UPF3B-201ENST00000276201 DCAF6Q58WW2 860 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 BTBD8Q5XKL5 378 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 XKR5Q6UX68 686 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 CYHR1Q6ZMK1 362 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 HS6ST3Q8IZP7 471 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 SLC15A4Q8N697 577 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 PPHLN1Q8NEY8 458 aaKnown RBP10.23□□□□□ -0.77
UPF3B-201ENST00000276201 S100ZQ8WXG8 99 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 WDR12Q9GZL7 423 aaKnown RBP10.23□□□□□ -0.77
UPF3B-201ENST00000276201 SLC52A3Q9NQ40 469 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 IFT80Q9P2H3 777 aaPredicted RBP10.23□□□□□ -0.77
UPF3B-201ENST00000276201 MUC3AQ02505 3323 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 ARPC2O15144 300 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 ANXA9O76027 345 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 TFPTP0C1Z6 253 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 PTPN2P17706 415 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 JAK1P23458 1154 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 ARNTP27540 789 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 MAP4P27816 1152 aaKnown RBP10.23□□□□□ -0.77
UPF3B-201ENST00000276201 CCR2P41597 374 aa10.23□□□□□ -0.77
UPF3B-201ENST00000276201 TUFMP49411 452 aaKnown RBP10.23□□□□□ -0.77
UPF3B-201ENST00000276201 GPR15P49685 360 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms