RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 MTA1Q13330 715 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 RCAN2Q14206 197 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 CTF1Q16619 201 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 FAM98BQ52LJ0 330 aaKnown RBP12.78□□□□□ -0.36
COL8A1-202ENST00000273342 SIRPB2Q5JXA9 342 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 CATSPEREQ5SY80 951 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 KIAA0408Q6ZU52 694 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 BHLHA9Q7RTU4 235 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 OR52B6Q8NGF0 335 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 CAPSLQ8WWF8 208 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 HGH1Q9BTY7 390 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 MROQ9BYG7 248 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 ERVK-18Q9QC07 812 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 DNMT3BQ9UBC3 853 aaKnown RBP12.78□□□□□ -0.36
COL8A1-202ENST00000273342 ZNF225Q9UK10 706 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 DOCK1Q14185 1865 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 TANC1Q9C0D5 1861 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 CCDC162PA2VCL2 907 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 PTGESO14684 152 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 DFNA5O60443 496 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 GLP2RO95838 553 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 DNAJB1P25685 340 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 GSTM2P28161 218 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 ZFP36L2P47974 494 aaKnown RBP12.78□□□□□ -0.36
COL8A1-202ENST00000273342 TIAL1Q01085 375 aaKnown RBP eCLIP12.78□□□□□ -0.36
COL8A1-202ENST00000273342 GALNT1Q10472 559 aaPredicted RBP12.78□□□□□ -0.36
COL8A1-202ENST00000273342 LCP2Q13094 533 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 SKIV2LQ15477 1246 aaKnown RBP12.78□□□□□ -0.36
COL8A1-202ENST00000273342 TMEM179BQ7Z7N9 219 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 PROKR1Q8TCW9 393 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 BPIFB1Q8TDL5 484 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 PSMG2Q969U7 264 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 MYLPFQ96A32 169 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 TSGA13Q96PP4 275 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 GAD1Q99259 594 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 SMOC2Q9H3U7 446 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 AGO3Q9H9G7 860 aaKnown RBP12.78□□□□□ -0.36
COL8A1-202ENST00000273342 WDR70Q9NW82 654 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 GMIPQ9P107 970 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 ACTL7AQ9Y615 435 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 COMMD10Q9Y6G5 202 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 DNAJC25-GNG10A0A024R161 153 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 TRIM64BA6NI03 449 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 C16orf96A6NNT2 1141 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 H0YAE9 185 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 CD3EAPO15446 510 aaKnown RBP12.78□□□□□ -0.36
COL8A1-202ENST00000273342 CACNG3O60359 315 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 ECI2O75521 394 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 G6PDP11413 515 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 DARSP14868 501 aaKnown RBP12.78□□□□□ -0.36
COL8A1-202ENST00000273342 CDKN1CP49918 316 aaPredicted RBP12.78□□□□□ -0.36
COL8A1-202ENST00000273342 HTR6P50406 440 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 RAB15P59190 212 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 KCNC4Q03721 635 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 EMX1Q04741 257 aaPredicted RBP12.78□□□□□ -0.36
COL8A1-202ENST00000273342 FOXD4Q12950 439 aaPredicted RBP12.78□□□□□ -0.36
COL8A1-202ENST00000273342 SMN1Q16637 294 aaKnown RBP12.78□□□□□ -0.36
COL8A1-202ENST00000273342 ANKS6Q68DC2 871 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 KDELC1Q6UW63 502 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 RNF19BQ6ZMZ0 732 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 PHACTR4Q8IZ21 702 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 SCML4Q8N228 414 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 PNPT1Q8TCS8 783 aaKnown RBP12.78□□□□□ -0.36
COL8A1-202ENST00000273342 HMCESQ96FZ2 354 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 MBOAT4Q96T53 435 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 LRRC3Q9BY71 257 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 PALMDQ9NP74 551 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 SPATA7Q9P0W8 599 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 ADGRE2Q9UHX3 823 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 EIF2B4Q9UI10 523 aaKnown RBP12.78□□□□□ -0.36
COL8A1-202ENST00000273342 FBXO10Q9UK96 956 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 ATP11BQ9Y2G3 1177 aa12.78□□□□□ -0.36
COL8A1-202ENST00000273342 SBF1O95248 1867 aa12.77□□□□□ -0.36
COL8A1-202ENST00000273342 MKI67P46013 3256 aaKnown RBP12.77□□□□□ -0.36
COL8A1-202ENST00000273342 ARVCFO00192 962 aa12.77□□□□□ -0.36
COL8A1-202ENST00000273342 SOAT2O75908 522 aa12.77□□□□□ -0.36
COL8A1-202ENST00000273342 PRKD3O94806 890 aa12.77□□□□□ -0.36
COL8A1-202ENST00000273342 MATN4O95460 622 aa12.77□□□□□ -0.36
COL8A1-202ENST00000273342 FADS2O95864 444 aaKnown RBP12.77□□□□□ -0.36
COL8A1-202ENST00000273342 CDH1P12830 882 aa12.77□□□□□ -0.36
COL8A1-202ENST00000273342 AIF1P55008 147 aa12.77□□□□□ -0.36
COL8A1-202ENST00000273342 RPS3AP61247 264 aaKnown RBP12.77□□□□□ -0.36
COL8A1-202ENST00000273342 DMPKQ09013 629 aa12.77□□□□□ -0.36
COL8A1-202ENST00000273342 LAIR2Q6ISS4 152 aa12.77□□□□□ -0.36
COL8A1-202ENST00000273342 DPP9Q86TI2 863 aa12.77□□□□□ -0.36
COL8A1-202ENST00000273342 SCAIQ8N9R8 606 aa12.77□□□□□ -0.36
COL8A1-202ENST00000273342 STARD8Q92502 1023 aa12.77□□□□□ -0.36
COL8A1-202ENST00000273342 TDRD1Q9BXT4 1180 aaKnown RBP12.77□□□□□ -0.36
COL8A1-202ENST00000273342 EHD1Q9H4M9 534 aa12.77□□□□□ -0.36
COL8A1-202ENST00000273342 AIG1Q9NVV5 245 aa12.77□□□□□ -0.36
COL8A1-202ENST00000273342 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.77□□□□□ -0.36
COL8A1-202ENST00000273342 SLCO3A1Q9UIG8 710 aa12.77□□□□□ -0.36
COL8A1-202ENST00000273342 ZMYM5Q9UJ78 669 aa12.77□□□□□ -0.36
COL8A1-202ENST00000273342 NEU3Q9UQ49 428 aa12.77□□□□□ -0.36
COL8A1-202ENST00000273342 ANXA6P08133 673 aa12.77□□□□□ -0.37
COL8A1-202ENST00000273342 HMBSP08397 361 aa12.77□□□□□ -0.37
COL8A1-202ENST00000273342 FGF4P08620 206 aa12.77□□□□□ -0.37
COL8A1-202ENST00000273342 SGO1Q5FBB7 561 aa12.77□□□□□ -0.37
COL8A1-202ENST00000273342 MARC1Q5VT66 337 aa12.77□□□□□ -0.37
COL8A1-202ENST00000273342 PTRH1Q86Y79 214 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms