RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 V9GYY5 206 aaPredicted RBP14.08□□□□□ -0.16
SSBP1-201ENST00000265304 KNTC1P50748 2209 aa14.07□□□□□ -0.16
SSBP1-201ENST00000265304 COL5A1P20908 1838 aaPredicted RBP14.07□□□□□ -0.16
SSBP1-201ENST00000265304 GOLGA8KD6RF30 607 aa14.07□□□□□ -0.16
SSBP1-201ENST00000265304 GOLGA8TH3BQL2 631 aa14.07□□□□□ -0.16
SSBP1-201ENST00000265304 CDX4O14627 284 aaPredicted RBP14.07□□□□□ -0.16
SSBP1-201ENST00000265304 RIPK2O43353 540 aa14.07□□□□□ -0.16
SSBP1-201ENST00000265304 GRID2O43424 1007 aa14.07□□□□□ -0.16
SSBP1-201ENST00000265304 TNFP01375 233 aa14.07□□□□□ -0.16
SSBP1-201ENST00000265304 AHSGP02765 367 aa14.07□□□□□ -0.16
SSBP1-201ENST00000265304 ESR1P03372 595 aa14.07□□□□□ -0.16
SSBP1-201ENST00000265304 ENGP17813 658 aa14.07□□□□□ -0.16
SSBP1-201ENST00000265304 MSH3P20585 1137 aa14.07□□□□□ -0.16
SSBP1-201ENST00000265304 STX2P32856 288 aa14.07□□□□□ -0.16
SSBP1-201ENST00000265304 SLC1A2P43004 574 aa14.07□□□□□ -0.16
SSBP1-201ENST00000265304 CTSCP53634 463 aa14.07□□□□□ -0.16
SSBP1-201ENST00000265304 PMS2P54278 862 aa14.07□□□□□ -0.16
SSBP1-201ENST00000265304 CTBP1Q13363 440 aa14.07□□□□□ -0.16
SSBP1-201ENST00000265304 ZNF470Q6ECI4 717 aa14.07□□□□□ -0.16
SSBP1-201ENST00000265304 LVRNQ6Q4G3 990 aa14.07□□□□□ -0.16
SSBP1-201ENST00000265304 XKR5Q6UX68 686 aa14.07□□□□□ -0.16
SSBP1-201ENST00000265304 MARK2Q7KZI7 788 aaKnown RBP14.07□□□□□ -0.16
SSBP1-201ENST00000265304 ASCL5Q7RTU5 278 aa14.07□□□□□ -0.16
SSBP1-201ENST00000265304 PHACTR4Q8IZ21 702 aa14.07□□□□□ -0.16
SSBP1-201ENST00000265304 CNPY4Q8N129 248 aa14.07□□□□□ -0.16
SSBP1-201ENST00000265304 PNPLA1Q8N8W4 532 aa14.07□□□□□ -0.16
SSBP1-201ENST00000265304 TSACCQ96A04 125 aaPredicted RBP14.07□□□□□ -0.16
SSBP1-201ENST00000265304 PHOX2BQ99453 314 aa14.07□□□□□ -0.16
SSBP1-201ENST00000265304 BOCQ9BWV1 1114 aa14.07□□□□□ -0.16
SSBP1-201ENST00000265304 IL1RAPL1Q9NZN1 696 aa14.07□□□□□ -0.16
SSBP1-201ENST00000265304 PCOLCE2Q9UKZ9 415 aa14.07□□□□□ -0.16
SSBP1-201ENST00000265304 SUFUQ9UMX1 484 aa14.07□□□□□ -0.16
SSBP1-201ENST00000265304 MED16Q9Y2X0 877 aa14.07□□□□□ -0.16
SSBP1-201ENST00000265304 PCDHB1Q9Y5F3 818 aa14.07□□□□□ -0.16
SSBP1-201ENST00000265304 ST14Q9Y5Y6 855 aa14.07□□□□□ -0.16
SSBP1-201ENST00000265304 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.07□□□□□ -0.16
SSBP1-201ENST00000265304 RP1P56715 2156 aa14.07□□□□□ -0.16
SSBP1-201ENST00000265304 CCDC151A5D8V7 595 aa14.06□□□□□ -0.16
SSBP1-201ENST00000265304 CXorf49A8MYA2 514 aaPredicted RBP14.06□□□□□ -0.16
SSBP1-201ENST00000265304 H3BMM5 538 aa14.06□□□□□ -0.16
SSBP1-201ENST00000265304 TPP1O14773 563 aa14.06□□□□□ -0.16
SSBP1-201ENST00000265304 KMOO15229 486 aa14.06□□□□□ -0.16
SSBP1-201ENST00000265304 OR1I1O60431 355 aa14.06□□□□□ -0.16
SSBP1-201ENST00000265304 MTX2O75431 263 aa14.06□□□□□ -0.16
SSBP1-201ENST00000265304 NDUFS3O75489 264 aa14.06□□□□□ -0.16
SSBP1-201ENST00000265304 PIAS2O75928 621 aa14.06□□□□□ -0.16
SSBP1-201ENST00000265304 CER1O95813 267 aa14.06□□□□□ -0.16
SSBP1-201ENST00000265304 CFIP05156 583 aa14.06□□□□□ -0.16
SSBP1-201ENST00000265304 GIMD1P0DJR0 217 aa14.06□□□□□ -0.16
SSBP1-201ENST00000265304 JUNDP17535 347 aa14.06□□□□□ -0.16
SSBP1-201ENST00000265304 PMLP29590 882 aa14.06□□□□□ -0.16
SSBP1-201ENST00000265304 PHBP35232 272 aa14.06□□□□□ -0.16
SSBP1-201ENST00000265304 ARRB1P49407 418 aaPredicted RBP14.06□□□□□ -0.16
SSBP1-201ENST00000265304 SLC14A1Q13336 389 aa14.06□□□□□ -0.16
SSBP1-201ENST00000265304 KBTBD12Q3ZCT8 623 aa14.06□□□□□ -0.16
SSBP1-201ENST00000265304 ZNF789Q5FWF6 425 aa14.06□□□□□ -0.16
SSBP1-201ENST00000265304 ZNF648Q5T619 568 aaPredicted RBP14.06□□□□□ -0.16
SSBP1-201ENST00000265304 UBAP2Q5T6F2 1119 aaKnown RBP14.06□□□□□ -0.16
SSBP1-201ENST00000265304 WASH2PQ6VEQ5 465 aa14.06□□□□□ -0.16
SSBP1-201ENST00000265304 LDB1Q86U70 411 aaPredicted RBP14.06□□□□□ -0.16
SSBP1-201ENST00000265304 LRRTM4Q86VH4 590 aa14.06□□□□□ -0.16
SSBP1-201ENST00000265304 NRROSQ86YC3 692 aa14.06□□□□□ -0.16
SSBP1-201ENST00000265304 FSTL5Q8N475 847 aaPredicted RBP14.06□□□□□ -0.16
SSBP1-201ENST00000265304 CLDN19Q8N6F1 224 aa14.06□□□□□ -0.16
SSBP1-201ENST00000265304 SAP25Q8TEE9 199 aa14.06□□□□□ -0.16
SSBP1-201ENST00000265304 FBF1Q8TES7 1133 aa14.06□□□□□ -0.16
SSBP1-201ENST00000265304 HNRNPLLQ8WVV9 542 aaKnown RBP14.06□□□□□ -0.16
SSBP1-201ENST00000265304 SGF29Q96ES7 293 aa14.06□□□□□ -0.16
SSBP1-201ENST00000265304 DCUN1D1Q96GG9 259 aa14.06□□□□□ -0.16
SSBP1-201ENST00000265304 CYTH2Q99418 400 aa14.06□□□□□ -0.16
SSBP1-201ENST00000265304 CYP4F12Q9HCS2 524 aa14.06□□□□□ -0.16
SSBP1-201ENST00000265304 MRPL40Q9NQ50 206 aaKnown RBP14.06□□□□□ -0.16
SSBP1-201ENST00000265304 WASH6PQ9NQA3 447 aa14.06□□□□□ -0.16
SSBP1-201ENST00000265304 IARS2Q9NSE4 1012 aaKnown RBP14.06□□□□□ -0.16
SSBP1-201ENST00000265304 ZFATQ9P243 1243 aa14.06□□□□□ -0.16
SSBP1-201ENST00000265304 NCDNQ9UBB6 729 aa14.06□□□□□ -0.16
SSBP1-201ENST00000265304 PRSS21Q9Y6M0 314 aa14.06□□□□□ -0.16
SSBP1-201ENST00000265304 ANKRD12Q6UB98 2062 aa14.06□□□□□ -0.16
SSBP1-201ENST00000265304 SPTBN4Q9H254 2564 aa14.05□□□□□ -0.16
SSBP1-201ENST00000265304 UNC13CQ8NB66 2214 aa14.05□□□□□ -0.16
SSBP1-201ENST00000265304 MGAT4DA6NG13 374 aa14.05□□□□□ -0.16
SSBP1-201ENST00000265304 LMO7DNF2Z398 122 aa14.05□□□□□ -0.16
SSBP1-201ENST00000265304 F8W8V4 182 aa14.05□□□□□ -0.16
SSBP1-201ENST00000265304 TCEA3O75764 348 aa14.05□□□□□ -0.16
SSBP1-201ENST00000265304 HAUS5O94927 633 aa14.05□□□□□ -0.16
SSBP1-201ENST00000265304 ASMTLO95671 621 aa14.05□□□□□ -0.16
SSBP1-201ENST00000265304 EPHA8P29322 1005 aaPredicted RBP14.05□□□□□ -0.16
SSBP1-201ENST00000265304 LIMK1P53667 647 aa14.05□□□□□ -0.16
SSBP1-201ENST00000265304 CSE1LP55060 971 aaKnown RBP14.05□□□□□ -0.16
SSBP1-201ENST00000265304 SPEM2Q0P670 501 aa14.05□□□□□ -0.16
SSBP1-201ENST00000265304 GBX1Q14549 363 aa14.05□□□□□ -0.16
SSBP1-201ENST00000265304 BRD3Q15059 726 aa14.05□□□□□ -0.16
SSBP1-201ENST00000265304 RASA2Q15283 850 aa14.05□□□□□ -0.16
SSBP1-201ENST00000265304 UAP1Q16222 522 aaPredicted RBP14.05□□□□□ -0.16
SSBP1-201ENST00000265304 METRNLQ641Q3 311 aa14.05□□□□□ -0.16
SSBP1-201ENST00000265304 TCEAL6Q6IPX3 200 aa14.05□□□□□ -0.16
SSBP1-201ENST00000265304 ZNF549Q6P9A3 640 aa14.05□□□□□ -0.16
SSBP1-201ENST00000265304 TMEM220Q6QAJ8 160 aa14.05□□□□□ -0.16
SSBP1-201ENST00000265304 ZC3HC1Q86WB0 502 aaKnown RBP14.05□□□□□ -0.16
SSBP1-201ENST00000265304 GALNT13Q8IUC8 556 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms