RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 C1orf21Q9H246 121 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 CD84Q9UIB8 345 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 PSAT1Q9Y617 370 aa16.56■□□□□ 0.24
PHRF1-201ENST00000264555 PAPSS2O95340 614 aaPredicted RBP16.55■□□□□ 0.24
PHRF1-201ENST00000264555 TNNI3P19429 210 aa16.55■□□□□ 0.24
PHRF1-201ENST00000264555 BLMHQ13867 455 aa16.55■□□□□ 0.24
PHRF1-201ENST00000264555 CHSY3Q70JA7 882 aa16.55■□□□□ 0.24
PHRF1-201ENST00000264555 CXorf40BQ96DE9 158 aa16.55■□□□□ 0.24
PHRF1-201ENST00000264555 OR52B2Q96RD2 323 aa16.55■□□□□ 0.24
PHRF1-201ENST00000264555 FERD3LQ96RJ6 166 aa16.55■□□□□ 0.24
PHRF1-201ENST00000264555 SQORQ9Y6N5 450 aa16.55■□□□□ 0.24
PHRF1-201ENST00000264555 FAM72CH0Y354 149 aa16.55■□□□□ 0.24
PHRF1-201ENST00000264555 MYL12BO14950 172 aa16.55■□□□□ 0.24
PHRF1-201ENST00000264555 F7P08709 466 aaPredicted RBP16.55■□□□□ 0.24
PHRF1-201ENST00000264555 CYP4F8P98187 520 aa16.55■□□□□ 0.24
PHRF1-201ENST00000264555 SERINC3Q13530 473 aa16.55■□□□□ 0.24
PHRF1-201ENST00000264555 DGCR6Q14129 220 aa16.55■□□□□ 0.24
PHRF1-201ENST00000264555 FAM72AQ5TYM5 149 aa16.55■□□□□ 0.24
PHRF1-201ENST00000264555 TMEM198Q66K66 360 aa16.55■□□□□ 0.24
PHRF1-201ENST00000264555 FAM72DQ6L9T8 149 aa16.55■□□□□ 0.24
PHRF1-201ENST00000264555 EPGNQ6UW88 154 aa16.55■□□□□ 0.24
PHRF1-201ENST00000264555 FAM72BQ86X60 149 aa16.55■□□□□ 0.24
PHRF1-201ENST00000264555 HERPUD2Q9BSE4 406 aa16.55■□□□□ 0.24
PHRF1-201ENST00000264555 C9JVG2 144 aa16.55■□□□□ 0.24
PHRF1-201ENST00000264555 KERAO60938 352 aa16.55■□□□□ 0.24
PHRF1-201ENST00000264555 PRPS2P11908 318 aa16.55■□□□□ 0.24
PHRF1-201ENST00000264555 SLC11A1P49279 550 aa16.55■□□□□ 0.24
PHRF1-201ENST00000264555 SLC10A2Q12908 348 aaPredicted RBP16.55■□□□□ 0.24
PHRF1-201ENST00000264555 TIMM50Q3ZCQ8 353 aa16.55■□□□□ 0.24
PHRF1-201ENST00000264555 TMPRSS11BQ86T26 416 aa16.55■□□□□ 0.24
PHRF1-201ENST00000264555 CENPNQ96H22 339 aaPredicted RBP16.55■□□□□ 0.24
PHRF1-201ENST00000264555 IKZF3Q9UKT9 509 aa16.55■□□□□ 0.24
PHRF1-201ENST00000264555 RWDD3Q9Y3V2 267 aa16.55■□□□□ 0.24
PHRF1-201ENST00000264555 OR2AG2A6NM03 316 aa16.55■□□□□ 0.24
PHRF1-201ENST00000264555 DCLK1O15075 740 aa16.55■□□□□ 0.24
PHRF1-201ENST00000264555 PDE9AO76083 593 aa16.55■□□□□ 0.24
PHRF1-201ENST00000264555 MED26O95402 600 aa16.55■□□□□ 0.24
PHRF1-201ENST00000264555 IQCF3P0C7M6 154 aa16.55■□□□□ 0.24
PHRF1-201ENST00000264555 TRAF3Q13114 568 aa16.55■□□□□ 0.24
PHRF1-201ENST00000264555 SLC5A9Q2M3M2 681 aa16.55■□□□□ 0.24
PHRF1-201ENST00000264555 CYS1Q717R9 158 aa16.55■□□□□ 0.24
PHRF1-201ENST00000264555 CROCCP3Q8IVE0 287 aa16.55■□□□□ 0.24
PHRF1-201ENST00000264555 TCF25Q9BQ70 676 aa16.55■□□□□ 0.24
PHRF1-201ENST00000264555 ABCB8Q9NUT2 735 aa16.55■□□□□ 0.24
PHRF1-201ENST00000264555 CHD4Q14839 1912 aa16.55■□□□□ 0.24
PHRF1-201ENST00000264555 BTAF1O14981 1849 aa16.54■□□□□ 0.24
PHRF1-201ENST00000264555 MTMR11A4FU01 709 aa16.54■□□□□ 0.24
PHRF1-201ENST00000264555 CYP7B1O75881 506 aa16.54■□□□□ 0.24
PHRF1-201ENST00000264555 HNF4AP41235 474 aa16.54■□□□□ 0.24
PHRF1-201ENST00000264555 IRF5Q13568 498 aa16.54■□□□□ 0.24
PHRF1-201ENST00000264555 GLB1L3Q8NCI6 653 aaPredicted RBP16.54■□□□□ 0.24
PHRF1-201ENST00000264555 ESAMQ96AP7 390 aa16.54■□□□□ 0.24
PHRF1-201ENST00000264555 C6orf62Q9GZU0 229 aaPredicted RBP16.54■□□□□ 0.24
PHRF1-201ENST00000264555 ZDHHC2Q9UIJ5 367 aa16.54■□□□□ 0.24
PHRF1-201ENST00000264555 ZNF232Q9UNY5 417 aa16.54■□□□□ 0.24
PHRF1-201ENST00000264555 ASLP04424 464 aa16.54■□□□□ 0.24
PHRF1-201ENST00000264555 NR2F1P10589 423 aa16.54■□□□□ 0.24
PHRF1-201ENST00000264555 HTR1BP28222 390 aa16.54■□□□□ 0.24
PHRF1-201ENST00000264555 MTHFRP42898 656 aa16.54■□□□□ 0.24
PHRF1-201ENST00000264555 PITX1P78337 314 aaPredicted RBP16.54■□□□□ 0.24
PHRF1-201ENST00000264555 PPIGQ13427 754 aaKnown RBP eCLIP16.54■□□□□ 0.245e-8■■■□□ 18.2
PHRF1-201ENST00000264555 PPP4R4Q6NUP7 873 aa16.54■□□□□ 0.24
PHRF1-201ENST00000264555 ZNF540Q8NDQ6 660 aa16.54■□□□□ 0.24
PHRF1-201ENST00000264555 KBTBD7Q8WVZ9 684 aa16.54■□□□□ 0.24
PHRF1-201ENST00000264555 MYDGFQ969H8 173 aa16.54■□□□□ 0.24
PHRF1-201ENST00000264555 ZNF865P0CJ78 1059 aaPredicted RBP16.54■□□□□ 0.24
PHRF1-201ENST00000264555 PAICSP22234 425 aaKnown RBP16.54■□□□□ 0.24
PHRF1-201ENST00000264555 KLHL32Q96NJ5 620 aa16.54■□□□□ 0.24
PHRF1-201ENST00000264555 ACAT2Q9BWD1 397 aa16.54■□□□□ 0.24
PHRF1-201ENST00000264555 TLE6Q9H808 572 aa16.54■□□□□ 0.24
PHRF1-201ENST00000264555 NENFQ9UMX5 172 aa16.54■□□□□ 0.24
PHRF1-201ENST00000264555 DMTF1Q9Y222 760 aa16.54■□□□□ 0.24
PHRF1-201ENST00000264555 LAMA4Q16363 1823 aa16.54■□□□□ 0.24
PHRF1-201ENST00000264555 IL6P05231 212 aa16.54■□□□□ 0.24
PHRF1-201ENST00000264555 DLDP09622 509 aaKnown RBP16.54■□□□□ 0.24
PHRF1-201ENST00000264555 ITGAXP20702 1163 aa16.54■□□□□ 0.24
PHRF1-201ENST00000264555 SCAPQ12770 1279 aa16.54■□□□□ 0.24
PHRF1-201ENST00000264555 TRAP1Q12931 704 aaKnown RBP16.54■□□□□ 0.24
PHRF1-201ENST00000264555 C6orf52Q5T4I8 152 aa16.54■□□□□ 0.24
PHRF1-201ENST00000264555 CPA6Q8N4T0 437 aa16.54■□□□□ 0.24
PHRF1-201ENST00000264555 C2CD4AQ8NCU7 369 aaPredicted RBP16.54■□□□□ 0.24
PHRF1-201ENST00000264555 KPNA4O00629 521 aaPredicted RBP16.53■□□□□ 0.24
PHRF1-201ENST00000264555 PRAMEF11O60813 436 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 TULP3O75386 442 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 SERPINB7O75635 380 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 NOS3P29474 1203 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 CAP1Q01518 475 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 CHIT1Q13231 466 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 AIF1LQ9BQI0 150 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 HMG20AQ9NP66 347 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 N4BP2Q86UW6 1770 aaPredicted RBP16.53■□□□□ 0.24
PHRF1-201ENST00000264555 KDELR3O43731 214 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 CNTN5O94779 1100 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 SCELO95171 688 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 ERVK-8P63133 956 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 INAQ16352 499 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 RBM20Q5T481 1227 aaKnown RBP16.53■□□□□ 0.24
PHRF1-201ENST00000264555 PLEKHM3Q6ZWE6 761 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 BNIPLQ7Z465 357 aa16.53■□□□□ 0.24
PHRF1-201ENST00000264555 CILP2Q8IUL8 1156 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms