RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 ILVBLA1L0T0 632 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 PPP6CO00743 305 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 DYRK3O43781 588 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 KPNA6O60684 536 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 KERAO60938 352 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 USP17L7P0C7H9 530 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 SLC2A3P11169 496 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 PCNAP12004 261 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 KCNE1P15382 129 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 ZFP36L2P47974 494 aaKnown RBP12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 YWHAHQ04917 246 aaPredicted RBP12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 CDK5R2Q13319 367 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 SF3B4Q15427 424 aaKnown RBP eCLIP12.26□□□□□ -0.453e-6■■■□□ 15.4
CHMP2B-201ENST00000263780 XKR7Q5GH72 579 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 RAB41Q5JT25 222 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 SYT6Q5T7P8 510 aaPredicted RBP12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 MRNIPQ6NTE8 343 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 TXNDC11Q6PKC3 985 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 KDELC1Q6UW63 502 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 PRR23CQ6ZRP0 262 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 RALGPS2Q86X27 583 aaPredicted RBP12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 HIPK1Q86Z02 1210 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 OR52E4Q8NGH9 312 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 NDNFQ8TB73 568 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 FBLIM1Q8WUP2 373 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 CHAC2Q8WUX2 184 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 KLRG1Q96E93 195 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 ZNF486Q96H40 463 aaPredicted RBP12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 TEX37Q96LM6 180 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 ATOH8Q96SQ7 321 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 DSN1Q9H410 356 aa12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 INTS6Q9UL03 887 aaKnown RBP12.26□□□□□ -0.45
CHMP2B-201ENST00000263780 TTC34A8MYJ7 566 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 CENPBD1B2RD01 187 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 SUPT3HB4E1H0 165 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 HS6ST1O60243 411 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 PRKD3O94806 890 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 ANGPTL1O95841 491 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 SLC4A1P02730 911 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 CYP11A1P05108 521 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 ITGAMP11215 1152 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 MTHFD2P13995 350 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 JUNDP17535 347 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 MSH3P20585 1137 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 AGXTP21549 392 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 CES1P23141 567 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 ACVR2AP27037 513 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 PIGFQ07326 219 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 FADDQ13158 208 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 PWP1Q13610 501 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 OR4D1Q15615 310 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 PCSK7Q16549 785 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 PLEKHG6Q3KR16 790 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 ATP6AP1LQ52LC2 224 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 PAGE2Q7Z2X7 111 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 PSMA8Q8TAA3 256 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 KIAA1191Q96A73 305 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 SLC47A1Q96FL8 570 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 REXO5Q96IC2 774 aaKnown RBP12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 NSUN5Q96P11 429 aaKnown RBP12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 ZNF300Q96RE9 604 aaPredicted RBP12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 SH3GL1Q99961 368 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 SLC39A8Q9C0K1 460 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 MMP27Q9H306 513 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 ATP13A1Q9HD20 1204 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 RNF112Q9ULX5 631 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 TSC2P49815 1807 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 MROH6A6NGR9 719 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 STX16O14662 325 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 BCKDKO14874 412 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 SCELO95171 688 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 GLP2RO95838 553 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 PTTG1O95997 202 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 EGFRP00533 1210 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 ZNF37AP17032 561 aaPredicted RBP12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 POLR2EP19388 210 aaKnown RBP12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 EIF2DP41214 584 aaKnown RBP12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 LILRA4P59901 499 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 MAPK11Q15759 364 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 C6orf183Q5T699 404 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 DLEU7Q6UYE1 221 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 PIM3Q86V86 326 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 GPR150Q8NGU9 434 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 PEX13Q92968 403 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 PABPC5Q96DU9 382 aaKnown RBP12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 FAM49AQ9H0Q0 323 aaPredicted RBP12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 MAGIXQ9H6Y5 334 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 ACTR8Q9H981 624 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 SIAEQ9HAT2 523 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 SLAMF8Q9P0V8 285 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 FNIP2Q9P278 1114 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 KLQ9UEF7 1012 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 MAGED1Q9Y5V3 778 aaPredicted RBP12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 ZNF638Q14966 1978 aaKnown RBP12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 RALGAPA2Q2PPJ7 1873 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 MN1Q10571 1320 aaPredicted RBP12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 NOBOXO60393 691 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 HOXC13P31276 330 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 PIGAP37287 484 aa12.25□□□□□ -0.45
CHMP2B-201ENST00000263780 RENBPP51606 427 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms