RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 ALG2Q9H553 416 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 S100A14Q9HCY8 104 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 CDH22Q9UJ99 828 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 TCAF1Q9Y4C2 921 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 MRC1P22897 1456 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 A0A075B6Q4 140 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 MAGEB3O15480 346 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 USP2O75604 605 aaPredicted RBP12□□□□□ -0.49
COL8A1-201ENST00000261037 AP2A2O94973 939 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 NADKO95544 446 aaPredicted RBP12□□□□□ -0.49
COL8A1-201ENST00000261037 IDSP22304 550 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 CASP9P55211 416 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 POU5F1Q01860 360 aaKnown RBP12□□□□□ -0.49
COL8A1-201ENST00000261037 NOGQ13253 232 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 PPP1R3FQ6ZSY5 799 aaPredicted RBP12□□□□□ -0.49
COL8A1-201ENST00000261037 PRSS58Q8IYP2 241 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 TCAIMQ8N3R3 496 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 RASGEF1CQ8N431 466 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 LRRC17Q8N6Y2 441 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 LEMD2Q8NC56 503 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 TPK1Q9H3S4 243 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 NKIRAS2Q9NYR9 191 aa12□□□□□ -0.49
COL8A1-201ENST00000261037 NOS1APO75052 506 aaPredicted RBP11.99□□□□□ -0.49
COL8A1-201ENST00000261037 RLN1P04808 185 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 CAPGP40121 348 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 RPIAP49247 311 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 ERVK-21P61565 698 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 CLCQ05315 142 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 FAM182AQ5T1J6 154 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 MSANTD2Q6P1R3 559 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 FUT10Q6P4F1 479 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 CLIP4Q8N3C7 705 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 FBXO15Q8NCQ5 510 aaPredicted RBP11.99□□□□□ -0.49
COL8A1-201ENST00000261037 ZMIZ2Q8NF64 920 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 KBTBD7Q8WVZ9 684 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 ESAMQ96AP7 390 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 TIFAQ96CG3 184 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 HOPXQ9BPY8 73 aaPredicted RBP11.99□□□□□ -0.49
COL8A1-201ENST00000261037 ALKBH4Q9NXW9 302 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 COL20A1Q9P218 1284 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 ARL5AQ9Y689 179 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 GRIN2DO15399 1336 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 TTC24A2A3L6 582 aaPredicted RBP11.99□□□□□ -0.49
COL8A1-201ENST00000261037 LOC110117498-PIK3R3F6TDL0 507 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 hCG_2039718K7EN88 272 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 TNFRSF11BO00300 401 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 BCKDKO14874 412 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 COL6A1P12109 1028 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 POU2F1P14859 743 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 RHOQP17081 205 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 KELP23276 732 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 PPIBP23284 216 aaKnown RBP11.99□□□□□ -0.49
COL8A1-201ENST00000261037 PAX3P23760 479 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 CHST15Q7LFX5 561 aaPredicted RBP11.99□□□□□ -0.49
COL8A1-201ENST00000261037 STYXQ8WUJ0 223 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 HEXDCQ8WVB3 486 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 ZNF304Q9HCX3 659 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 NECTIN3Q9NQS3 549 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 NUDT4Q9NZJ9 180 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 EIF2B4Q9UI10 523 aaKnown RBP11.99□□□□□ -0.49
COL8A1-201ENST00000261037 FKBPLQ9UIM3 349 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 MRTO4Q9UKD2 239 aaKnown RBP11.99□□□□□ -0.49
COL8A1-201ENST00000261037 SAP18O00422 153 aaKnown RBP11.99□□□□□ -0.49
COL8A1-201ENST00000261037 XKRYO14609 159 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 NDST3O95803 873 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 PRKCGP05129 697 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 CCR10P46092 362 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 RPL5P46777 297 aaKnown RBP11.99□□□□□ -0.49
COL8A1-201ENST00000261037 MINDY4Q4G0A6 757 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 PJA1Q8NG27 643 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 SNX27Q96L92 541 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 CEP295NLQ96MC4 621 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 TSPAN18Q96SJ8 248 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 SLC28A3Q9HAS3 691 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 PIK3C2AO00443 1686 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 CAPN8A6NHC0 703 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 CPSF4LA6NMK7 179 aaKnown RBP11.99□□□□□ -0.49
COL8A1-201ENST00000261037 PGRMC2O15173 223 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 NOL4O94818 638 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 OR4F21O95013 312 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 KIR3DL1P43629 444 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 CDH4P55283 916 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 TRAP1Q12931 704 aaKnown RBP11.99□□□□□ -0.49
COL8A1-201ENST00000261037 ZNF846Q147U1 533 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 SULT1C3Q6IMI6 304 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 ESRP1Q6NXG1 681 aaKnown RBP11.99□□□□□ -0.49
COL8A1-201ENST00000261037 SLC30A6Q6NXT4 461 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 RTL4Q6ZR62 310 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 YTHDF3Q7Z739 585 aaKnown RBP11.99□□□□□ -0.49
COL8A1-201ENST00000261037 TNFRSF25Q93038 417 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 PSMG2Q969U7 264 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 HTATIP2Q9BUP3 242 aa11.99□□□□□ -0.49
COL8A1-201ENST00000261037 POLR3BQ9NW08 1133 aaPredicted RBP11.99□□□□□ -0.49
COL8A1-201ENST00000261037 INSIG1O15503 277 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 AP2A1O95782 977 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 UROSP10746 265 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 CDH3P22223 829 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 CCNCP24863 283 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 ARL2P36404 184 aa11.98□□□□□ -0.49
COL8A1-201ENST00000261037 SLC5A9Q2M3M2 681 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms