RNA–Protein interactions for RNA: ENST00000248633.8

PEX1-201, Transcript of peroxisomal biogenesis factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEX1, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-201ENST00000248633 CTGFP29279 349 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 SLC2A7Q6PXP3 512 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 NECAB2Q7Z6G3 386 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 TRPV3Q8NET8 790 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 PNPT1Q8TCS8 783 aaKnown RBP13.22□□□□□ -0.29
PEX1-201ENST00000248633 RAB2BQ8WUD1 216 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 ROPN1LQ96C74 230 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 SH3GL1Q99961 368 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 TTPALQ9BTX7 342 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 EHD3Q9NZN3 535 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 CRLS1Q9UJA2 301 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 ZNF623O75123 536 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 MED26O95402 600 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 CYBBP04839 570 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 MSH3P20585 1137 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 HALP42357 657 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 IST1P53990 364 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 DAOAP59103 153 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 IL2P60568 153 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 DUSP4Q13115 394 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 SYT16Q17RD7 645 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 AP5B1Q2VPB7 878 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 OR9Q1Q8NGQ5 310 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 ZNF558Q96NG5 402 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 SLC39A8Q9C0K1 460 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 CRTAC1Q9NQ79 661 aa13.22□□□□□ -0.29
PEX1-201ENST00000248633 FAM32AQ9Y421 112 aaKnown RBP13.22□□□□□ -0.29
PEX1-201ENST00000248633 CYP7B1O75881 506 aa13.21□□□□□ -0.29
PEX1-201ENST00000248633 OR1D2P34982 312 aa13.21□□□□□ -0.29
PEX1-201ENST00000248633 TUBA4AP68366 448 aa13.21□□□□□ -0.29
PEX1-201ENST00000248633 ACAP2Q15057 778 aa13.21□□□□□ -0.29
PEX1-201ENST00000248633 CPSF6Q16630 551 aaKnown RBP eCLIP13.21□□□□□ -0.29
PEX1-201ENST00000248633 STEAP4Q687X5 459 aa13.21□□□□□ -0.29
PEX1-201ENST00000248633 R3HCC1LQ7Z5L2 792 aaKnown RBP13.21□□□□□ -0.29
PEX1-201ENST00000248633 ZNF280BQ86YH2 543 aa13.21□□□□□ -0.29
PEX1-201ENST00000248633 NPAS4Q8IUM7 802 aa13.21□□□□□ -0.29
PEX1-201ENST00000248633 KDM1BQ8NB78 822 aa13.21□□□□□ -0.29
PEX1-201ENST00000248633 SCAMP5Q8TAC9 235 aa13.21□□□□□ -0.29
PEX1-201ENST00000248633 GPR21Q99679 349 aa13.21□□□□□ -0.29
PEX1-201ENST00000248633 CLPBQ9H078 707 aa13.21□□□□□ -0.29
PEX1-201ENST00000248633 MTIF3Q9H2K0 278 aaKnown RBP13.21□□□□□ -0.29
PEX1-201ENST00000248633 SACM1LQ9NTJ5 587 aa13.21□□□□□ -0.29
PEX1-201ENST00000248633 MARCH2Q9P0N8 246 aa13.21□□□□□ -0.29
PEX1-201ENST00000248633 EIF2B4Q9UI10 523 aaKnown RBP13.21□□□□□ -0.29
PEX1-201ENST00000248633 TEKT2Q9UIF3 430 aa13.21□□□□□ -0.29
PEX1-201ENST00000248633 DOCK5Q9H7D0 1870 aa13.21□□□□□ -0.29
PEX1-201ENST00000248633 ZCWPW2A0A1B0GU75 182 aa13.21□□□□□ -0.29
PEX1-201ENST00000248633 ENPP3O14638 875 aa13.21□□□□□ -0.29
PEX1-201ENST00000248633 HLA-DQB2P05538 268 aa13.21□□□□□ -0.29
PEX1-201ENST00000248633 HIST1H2AGP0C0S8 130 aaPredicted RBP13.21□□□□□ -0.29
PEX1-201ENST00000248633 HIST1H2ADP20671 130 aa13.21□□□□□ -0.29
PEX1-201ENST00000248633 RXRGP48443 463 aa13.21□□□□□ -0.29
PEX1-201ENST00000248633 SLC11A2P49281 568 aa13.21□□□□□ -0.29
PEX1-201ENST00000248633 PPM1FP49593 454 aaPredicted RBP13.21□□□□□ -0.29
PEX1-201ENST00000248633 UFM1P61960 85 aa13.21□□□□□ -0.29
PEX1-201ENST00000248633 TUBB3Q13509 450 aa13.21□□□□□ -0.29
PEX1-201ENST00000248633 USP41Q3LFD5 358 aa13.21□□□□□ -0.29
PEX1-201ENST00000248633 FAM219BQ5XKK7 198 aa13.21□□□□□ -0.29
PEX1-201ENST00000248633 FUT10Q6P4F1 479 aa13.21□□□□□ -0.29
PEX1-201ENST00000248633 PIWIL3Q7Z3Z3 882 aaKnown RBP13.21□□□□□ -0.29
PEX1-201ENST00000248633 AKAP14Q86UN6 197 aa13.21□□□□□ -0.29
PEX1-201ENST00000248633 LZTR1Q8N653 840 aa13.21□□□□□ -0.29
PEX1-201ENST00000248633 NPWQ8N729 165 aa13.21□□□□□ -0.29
PEX1-201ENST00000248633 LINGO1Q96FE5 620 aa13.21□□□□□ -0.29
PEX1-201ENST00000248633 HIST1H2AHQ96KK5 128 aa13.21□□□□□ -0.29
PEX1-201ENST00000248633 HIST1H2AJQ99878 128 aa13.21□□□□□ -0.29
PEX1-201ENST00000248633 APOL4Q9BPW4 351 aa13.21□□□□□ -0.29
PEX1-201ENST00000248633 H2AFJQ9BTM1 129 aa13.21□□□□□ -0.29
PEX1-201ENST00000248633 ELOVL6Q9H5J4 265 aa13.21□□□□□ -0.29
PEX1-201ENST00000248633 FAIMQ9NVQ4 179 aa13.21□□□□□ -0.29
PEX1-201ENST00000248633 OR6C75A6NL08 312 aa13.21□□□□□ -0.3
PEX1-201ENST00000248633 SLC22A2O15244 555 aa13.21□□□□□ -0.3
PEX1-201ENST00000248633 EFNA1P20827 205 aaPredicted RBP13.21□□□□□ -0.3
PEX1-201ENST00000248633 PPP3CCP48454 512 aa13.21□□□□□ -0.3
PEX1-201ENST00000248633 TUFMP49411 452 aaKnown RBP13.21□□□□□ -0.3
PEX1-201ENST00000248633 UPP1Q16831 310 aa13.21□□□□□ -0.3
PEX1-201ENST00000248633 CMTR2Q8IYT2 770 aaKnown RBP13.21□□□□□ -0.3
PEX1-201ENST00000248633 HS6ST3Q8IZP7 471 aa13.21□□□□□ -0.3
PEX1-201ENST00000248633 SIX5Q8N196 739 aa13.21□□□□□ -0.3
PEX1-201ENST00000248633 KCNN1Q92952 543 aa13.21□□□□□ -0.3
PEX1-201ENST00000248633 RTP4Q96DX8 246 aa13.21□□□□□ -0.3
PEX1-201ENST00000248633 ASB2Q96Q27 587 aa13.21□□□□□ -0.3
PEX1-201ENST00000248633 DEPDC7Q96QD5 511 aa13.21□□□□□ -0.3
PEX1-201ENST00000248633 WDR12Q9GZL7 423 aaKnown RBP13.21□□□□□ -0.3
PEX1-201ENST00000248633 SMPD4Q9NXE4 827 aa13.21□□□□□ -0.3
PEX1-201ENST00000248633 VPS51Q9UID3 782 aa13.21□□□□□ -0.3
PEX1-201ENST00000248633 PSME2Q9UL46 239 aa13.21□□□□□ -0.3
PEX1-201ENST00000248633 F5H5T6 163 aa13.2□□□□□ -0.3
PEX1-201ENST00000248633 BCKDKO14874 412 aa13.2□□□□□ -0.3
PEX1-201ENST00000248633 IDH3BO43837 385 aa13.2□□□□□ -0.3
PEX1-201ENST00000248633 NDUFS2O75306 463 aa13.2□□□□□ -0.3
PEX1-201ENST00000248633 MYO1DO94832 1006 aa13.2□□□□□ -0.3
PEX1-201ENST00000248633 LRG1P02750 347 aa13.2□□□□□ -0.3
PEX1-201ENST00000248633 TYMPP19971 482 aa13.2□□□□□ -0.3
PEX1-201ENST00000248633 NKX2-5P52952 324 aaPredicted RBP13.2□□□□□ -0.3
PEX1-201ENST00000248633 GPR180Q86V85 440 aa13.2□□□□□ -0.3
PEX1-201ENST00000248633 CFAP52Q8N1V2 620 aa13.2□□□□□ -0.3
PEX1-201ENST00000248633 SETD9Q8NE22 299 aa13.2□□□□□ -0.3
PEX1-201ENST00000248633 TSSK3Q96PN8 268 aa13.2□□□□□ -0.3
PEX1-201ENST00000248633 TRIM54Q9BYV2 358 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms