RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 FYNP06241 537 aa10.89□□□□□ -0.67
COPA-201ENST00000241704 CKMT2P17540 419 aa10.89□□□□□ -0.67
COPA-201ENST00000241704 TFEBP19484 476 aa10.89□□□□□ -0.67
COPA-201ENST00000241704 ETV4P43268 484 aa10.89□□□□□ -0.67
COPA-201ENST00000241704 CLDN10P78369 228 aa10.89□□□□□ -0.67
COPA-201ENST00000241704 CDKL1Q00532 357 aa10.89□□□□□ -0.67
COPA-201ENST00000241704 SLC25A11Q02978 314 aaKnown RBP10.89□□□□□ -0.67
COPA-201ENST00000241704 KLF1Q13351 362 aaPredicted RBP10.89□□□□□ -0.67
COPA-201ENST00000241704 TOP3AQ13472 1001 aaPredicted RBP10.89□□□□□ -0.67
COPA-201ENST00000241704 NFYCQ13952 458 aa10.89□□□□□ -0.67
COPA-201ENST00000241704 GALNT3Q14435 633 aa10.89□□□□□ -0.67
COPA-201ENST00000241704 SMU1Q2TAY7 513 aa10.89□□□□□ -0.67
COPA-201ENST00000241704 HLA-DQA1Q5Y7H0 255 aa10.89□□□□□ -0.67
COPA-201ENST00000241704 NEK10Q6ZWH5 1172 aa10.89□□□□□ -0.67
COPA-201ENST00000241704 OR4L1Q8NH43 312 aa10.89□□□□□ -0.67
COPA-201ENST00000241704 HERVK_113Q902F9 699 aa10.89□□□□□ -0.67
COPA-201ENST00000241704 FEM1CQ96JP0 617 aa10.89□□□□□ -0.67
COPA-201ENST00000241704 MAGEH1Q9H213 219 aa10.89□□□□□ -0.67
COPA-201ENST00000241704 PTPRHQ9HD43 1115 aa10.89□□□□□ -0.67
COPA-201ENST00000241704 CCDC167Q9P0B6 97 aa10.89□□□□□ -0.67
COPA-201ENST00000241704 VWA7Q9Y334 891 aa10.89□□□□□ -0.67
COPA-201ENST00000241704 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.89□□□□□ -0.67
COPA-201ENST00000241704 A0A1W2PRU2 124 aa10.89□□□□□ -0.67
COPA-201ENST00000241704 SAGE2PA6NJ88 616 aa10.89□□□□□ -0.67
COPA-201ENST00000241704 PTGES3LE9PB15 166 aa10.89□□□□□ -0.67
COPA-201ENST00000241704 H3BMQ9 156 aa10.89□□□□□ -0.67
COPA-201ENST00000241704 NR5A2O00482 541 aa10.89□□□□□ -0.67
COPA-201ENST00000241704 TRIM24O15164 1050 aa10.89□□□□□ -0.67
COPA-201ENST00000241704 PLIN3O60664 434 aa10.89□□□□□ -0.67
COPA-201ENST00000241704 SLC25A14O95258 325 aaPredicted RBP10.89□□□□□ -0.67
COPA-201ENST00000241704 GJA5P36382 358 aa10.89□□□□□ -0.67
COPA-201ENST00000241704 GAD2Q05329 585 aa10.89□□□□□ -0.67
COPA-201ENST00000241704 ATP6AP1LQ52LC2 224 aa10.89□□□□□ -0.67
COPA-201ENST00000241704 SLC22A16Q86VW1 577 aa10.89□□□□□ -0.67
COPA-201ENST00000241704 OFCC1Q8IZS5 231 aa10.89□□□□□ -0.67
COPA-201ENST00000241704 OR14C36Q8NHC7 312 aa10.89□□□□□ -0.67
COPA-201ENST00000241704 FAM162AQ96A26 154 aa10.89□□□□□ -0.67
COPA-201ENST00000241704 TEKT5Q96M29 485 aa10.89□□□□□ -0.67
COPA-201ENST00000241704 COG8Q96MW5 612 aa10.89□□□□□ -0.67
COPA-201ENST00000241704 FAM126AQ9BYI3 521 aaPredicted RBP10.89□□□□□ -0.67
COPA-201ENST00000241704 IRF2BPLQ9H1B7 796 aa10.89□□□□□ -0.67
COPA-201ENST00000241704 BPIFA1Q9NP55 256 aa10.89□□□□□ -0.67
COPA-201ENST00000241704 EIF2B3Q9NR50 452 aaKnown RBP10.89□□□□□ -0.67
COPA-201ENST00000241704 CHRAC1Q9NRG0 131 aa10.89□□□□□ -0.67
COPA-201ENST00000241704 SNX10Q9Y5X0 201 aa10.89□□□□□ -0.67
COPA-201ENST00000241704 PNMA8CA0A1B0GUJ8 204 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 A0A1B0GVM2 712 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 TCAF2A6NFQ2 919 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 SLC38A8A6NNN8 435 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 QSOX1O00391 747 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 PIK3CGP48736 1102 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 CDH4P55283 916 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 TXNL4AP83876 142 aaKnown RBP10.88□□□□□ -0.67
COPA-201ENST00000241704 ECT2LQ008S8 904 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 MRPL28Q13084 256 aaKnown RBP10.88□□□□□ -0.67
COPA-201ENST00000241704 GRM3Q14832 879 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 PFKFB4Q16877 469 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 MSS51Q4VC12 460 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 FGD3Q5JSP0 725 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 SLC9A4Q6AI14 798 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 C17orf99Q6UX52 265 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 DET1Q7L5Y6 550 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 MILR1Q7Z6M3 343 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 CMC1Q7Z7K0 106 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 ASB9Q96DX5 294 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 RPF2Q9H7B2 306 aaKnown RBP10.88□□□□□ -0.67
COPA-201ENST00000241704 PNPLA8Q9NP80 782 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 PIGVQ9NUD9 493 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 SMPD3Q9NY59 655 aaPredicted RBP10.88□□□□□ -0.67
COPA-201ENST00000241704 BTBD3Q9Y2F9 522 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 SLX4Q8IY92 1834 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 FAM172BPA6NC97 362 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 SLC22A2O15244 555 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 CD3EAPO15446 510 aaKnown RBP10.88□□□□□ -0.67
COPA-201ENST00000241704 VPS4BO75351 444 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 KATNA1O75449 491 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 C2P06681 752 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 ZNF10P21506 573 aaPredicted RBP10.88□□□□□ -0.67
COPA-201ENST00000241704 LSM3P62310 102 aaKnown RBP10.88□□□□□ -0.67
COPA-201ENST00000241704 NFATC3Q12968 1075 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 ATAD3BQ5T9A4 648 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 TCAIMQ8N3R3 496 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 OR2T34Q8NGX1 318 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 OR2T3Q8NH03 318 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 HGH1Q9BTY7 390 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 POLMQ9NP87 494 aaPredicted RBP10.88□□□□□ -0.67
COPA-201ENST00000241704 DIABLOQ9NR28 239 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 SNTNA6NMZ2 147 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 ADAM23O75077 832 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 GPR32O75388 356 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 TMEM63AO94886 807 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 NDST3O95803 873 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 PROZP22891 400 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 CPOXP36551 454 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 CAPZA2P47755 286 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 GRIA4P48058 902 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 HCAR3P49019 387 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 CYP4F8P98187 520 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 SEMA5AQ13591 1074 aa10.88□□□□□ -0.67
COPA-201ENST00000241704 TTC23Q5W5X9 447 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms