RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 OSCP1Q8WVF1 389 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 TWIST2Q8WVJ9 160 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 TRUB1Q8WWH5 349 aaKnown RBP9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 VPS33AQ96AX1 596 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 SDCCAG3Q96C92 435 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 ALPK1Q96QP1 1244 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 TCF12Q99081 682 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 ERVK-6Q9BXR3 956 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 ARNT2Q9HBZ2 717 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 MRPL40Q9NQ50 206 aaKnown RBP9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 CCM2LQ9NUG4 571 aaPredicted RBP9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 SLAMF8Q9P0V8 285 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 CPA4Q9UI42 421 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 DHRS12A0PJE2 317 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 TNFRSF10AO00220 468 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 TBX1O43435 398 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 LDB2O43679 373 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 SNX2O60749 519 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 CCNKO75909 580 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 TBX18O95935 607 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 BMP2P12643 396 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 IFI30P13284 250 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 SLC6A2P23975 617 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 CYP2C18P33260 490 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 GPR15P49685 360 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 RACK1P63244 317 aaKnown RBP9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 GALNT1Q10472 559 aaPredicted RBP9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 NDUFA5Q16718 116 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 RABL3Q5HYI8 236 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 BRMS1LQ5PSV4 323 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 TMEM236Q5W0B7 351 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 SCIMPQ6UWF3 145 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 FRA10AC1Q70Z53 315 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 PHYKPLQ8IUZ5 450 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 SCN4BQ8IWT1 228 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 OR13C4Q8NGS5 318 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 ZFP90Q8TF47 636 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 TANKQ92844 425 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 L3HYPDHQ96EM0 354 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 TSPAN17Q96FV3 270 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 IRF2BPLQ9H1B7 796 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 TRIT1Q9H3H1 467 aaKnown RBP9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 SMOC2Q9H3U7 446 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 EXD2Q9NVH0 621 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 IKZF3Q9UKT9 509 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 OAZ3Q9UMX2 235 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 SATB2Q9UPW6 733 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 KIAA1671Q9BY89 1806 aa9.32□□□□□ -0.92
HLA-DOA-201ENST00000229829 MROH6A6NGR9 719 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 TNFRSF10BO14763 440 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 RAD51BO15315 384 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 INPP4BO15327 924 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 TEX28O15482 410 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 BMP10O95393 424 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 CHRNA1P02708 482 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 ODC1P11926 461 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 PRDX3P30048 256 aaKnown RBP9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 TUBA4AP68366 448 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 ZNF846Q147U1 533 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 FUT11Q495W5 492 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 CCDC58Q4VC31 144 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 MARC1Q5VT66 337 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 C9orf131Q5VYM1 1079 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 TRAF7Q6Q0C0 670 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 ABRAXAS1Q6UWZ7 409 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 MMAAQ8IVH4 418 aaKnown RBP9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 SYTL1Q8IYJ3 562 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 LILRB4Q8NHJ6 448 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 BLOC1S5Q8TDH9 187 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 GPR152Q8TDT2 470 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 SGCDQ92629 289 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 ESAMQ96AP7 390 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 TUBGCP3Q96CW5 907 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 DEPDC7Q96QD5 511 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 NEK6Q9HC98 313 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 SEMA4BQ9NPR2 832 aaPredicted RBP9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 ARMC1Q9NVT9 282 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 KLHL3Q9UH77 587 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 CAB39Q9Y376 341 aaPredicted RBP9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 ACTL7AQ9Y615 435 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 PMF1-BGLAPU3KQ54 211 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 PTPRSQ13332 1948 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 SYCE1LA8MT33 242 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 TMCC2O75069 709 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 GOT2P00505 430 aaKnown RBP9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 CCDC159P0C7I6 412 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 CDH1P12830 882 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 HGFP14210 728 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 DAB2P98082 770 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 MERTKQ12866 999 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 GALNT3Q14435 633 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 SNAP47Q5SQN1 464 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 OVOS1Q6IE37 1185 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 NEK5Q6P3R8 708 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 HACD2Q6Y1H2 254 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 DTX3Q8N9I9 347 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 GTF3C2Q8WUA4 911 aaPredicted RBP9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 NUDT8Q8WV74 236 aa9.31□□□□□ -0.92
HLA-DOA-201ENST00000229829 SMIM14Q96QK8 99 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms