RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 NSMCE2Q96MF7 247 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 ASB2Q96Q27 587 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 TSPAN18Q96SJ8 248 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 SEMA3CQ99985 751 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 LRRC3Q9BY71 257 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 YTHDF1Q9BYJ9 559 aaKnown RBP12.28□□□□□ -0.44
NUP88-201ENST00000225696 ABHD16BQ9H3Z7 469 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 GPN2Q9H9Y4 310 aaPredicted RBP12.28□□□□□ -0.44
NUP88-201ENST00000225696 PCDH12Q9NPG4 1184 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 FAM105AQ9NUU6 356 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 AASSQ9UDR5 926 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 WARS2Q9UGM6 360 aaKnown RBP12.28□□□□□ -0.44
NUP88-201ENST00000225696 LEF1Q9UJU2 399 aaPredicted RBP12.28□□□□□ -0.44
NUP88-201ENST00000225696 PCTPQ9UKL6 214 aa12.28□□□□□ -0.44
NUP88-201ENST00000225696 KRBA1A5PL33 1030 aa12.27□□□□□ -0.45
NUP88-201ENST00000225696 PDHXO00330 501 aa12.27□□□□□ -0.45
NUP88-201ENST00000225696 SNX2O60749 519 aa12.27□□□□□ -0.45
NUP88-201ENST00000225696 NOL3O60936 208 aaKnown RBP12.27□□□□□ -0.45
NUP88-201ENST00000225696 RHOBTB1O94844 696 aa12.27□□□□□ -0.45
NUP88-201ENST00000225696 OR4F21O95013 312 aa12.27□□□□□ -0.45
NUP88-201ENST00000225696 PRSS23O95084 383 aa12.27□□□□□ -0.45
NUP88-201ENST00000225696 ENO2P09104 434 aaPredicted RBP12.27□□□□□ -0.45
NUP88-201ENST00000225696 CDH1P12830 882 aa12.27□□□□□ -0.45
NUP88-201ENST00000225696 GPR15P49685 360 aa12.27□□□□□ -0.45
NUP88-201ENST00000225696 HTR6P50406 440 aa12.27□□□□□ -0.45
NUP88-201ENST00000225696 STC1P52823 247 aa12.27□□□□□ -0.45
NUP88-201ENST00000225696 ACVR1Q04771 509 aa12.27□□□□□ -0.45
NUP88-201ENST00000225696 BTG3Q14201 252 aaPredicted RBP12.27□□□□□ -0.45
NUP88-201ENST00000225696 PTPRRQ15256 657 aa12.27□□□□□ -0.45
NUP88-201ENST00000225696 CRY1Q16526 586 aa12.27□□□□□ -0.45
NUP88-201ENST00000225696 ANKS6Q68DC2 871 aa12.27□□□□□ -0.45
NUP88-201ENST00000225696 NIPAL1Q6NVV3 410 aa12.27□□□□□ -0.45
NUP88-201ENST00000225696 SPATA19Q7Z5L4 167 aa12.27□□□□□ -0.45
NUP88-201ENST00000225696 TMEM179BQ7Z7N9 219 aa12.27□□□□□ -0.45
NUP88-201ENST00000225696 HID1Q8IV36 788 aa12.27□□□□□ -0.45
NUP88-201ENST00000225696 PARP8Q8N3A8 854 aa12.27□□□□□ -0.45
NUP88-201ENST00000225696 CHDHQ8NE62 594 aaPredicted RBP12.27□□□□□ -0.45
NUP88-201ENST00000225696 TTC16Q8NEE8 873 aa12.27□□□□□ -0.45
NUP88-201ENST00000225696 OR4L1Q8NH43 312 aa12.27□□□□□ -0.45
NUP88-201ENST00000225696 ZC3H15Q8WU90 426 aaKnown RBP12.27□□□□□ -0.45
NUP88-201ENST00000225696 RAB2BQ8WUD1 216 aa12.27□□□□□ -0.45
NUP88-201ENST00000225696 TADA1Q96BN2 335 aa12.27□□□□□ -0.45
NUP88-201ENST00000225696 B3GALT6Q96L58 329 aa12.27□□□□□ -0.45
NUP88-201ENST00000225696 CYP2S1Q96SQ9 504 aa12.27□□□□□ -0.45
NUP88-201ENST00000225696 GPR21Q99679 349 aa12.27□□□□□ -0.45
NUP88-201ENST00000225696 ACBD6Q9BR61 282 aa12.27□□□□□ -0.45
NUP88-201ENST00000225696 ZBED2Q9BTP6 218 aa12.27□□□□□ -0.45
NUP88-201ENST00000225696 TDRD1Q9BXT4 1180 aaKnown RBP12.27□□□□□ -0.45
NUP88-201ENST00000225696 ALOXE3Q9BYJ1 711 aa12.27□□□□□ -0.45
NUP88-201ENST00000225696 RAD21L1Q9H4I0 556 aa12.27□□□□□ -0.45
NUP88-201ENST00000225696 IKZF5Q9H5V7 419 aa12.27□□□□□ -0.45
NUP88-201ENST00000225696 FAM118AQ9NWS6 357 aa12.27□□□□□ -0.45
NUP88-201ENST00000225696 GMIPQ9P107 970 aa12.27□□□□□ -0.45
NUP88-201ENST00000225696 EIF2B4Q9UI10 523 aaKnown RBP12.27□□□□□ -0.45
NUP88-201ENST00000225696 TSR3Q9UJK0 312 aaKnown RBP12.27□□□□□ -0.45
NUP88-201ENST00000225696 ST3GAL5Q9UNP4 418 aa12.27□□□□□ -0.45
NUP88-201ENST00000225696 INVSQ9Y283 1065 aa12.27□□□□□ -0.45
NUP88-201ENST00000225696 LAMA3Q16787 3333 aa12.27□□□□□ -0.45
NUP88-201ENST00000225696 DOCK4Q8N1I0 1966 aa12.27□□□□□ -0.45
NUP88-201ENST00000225696 PTGES3LE9PB15 166 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 BTN3A1O00481 513 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 OR1I1O60431 355 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 ESRRBO95718 433 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 CTSHP09668 335 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 G6PDP11413 515 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 NFKBIAP25963 317 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 GRIK1P39086 918 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 PSEN2P49810 448 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 CD47Q08722 323 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 RBBP7Q16576 425 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 MS4A13Q5J8X5 152 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 IQSEC1Q6DN90 963 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 CRTC3Q6UUV7 619 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 TMCO5AQ8N6Q1 288 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 FBXO30Q8TB52 745 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 ITFG1Q8TB96 612 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 STAG3L4Q8TBR4 150 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 PNPT1Q8TCS8 783 aaKnown RBP12.26□□□□□ -0.45
NUP88-201ENST00000225696 GPR152Q8TDT2 470 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 TAMM41Q96BW9 452 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 SH3YL1Q96HL8 342 aaPredicted RBP12.26□□□□□ -0.45
NUP88-201ENST00000225696 PPP1R2P1Q96PQ5 205 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 HGH1Q9BTY7 390 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 BEGAINQ9BUH8 593 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 PRDM5Q9NQX1 630 aaPredicted RBP12.26□□□□□ -0.45
NUP88-201ENST00000225696 C8orf4Q9NR00 106 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 CATSPERZQ9NTU4 200 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 DNMT3BQ9UBC3 853 aaKnown RBP12.26□□□□□ -0.45
NUP88-201ENST00000225696 TRIM17Q9Y577 477 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 SPO11Q9Y5K1 396 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 DFNA5O60443 496 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 GSTM2P28161 218 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 ALDH4A1P30038 563 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 GGT5P36269 586 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 RAD23AP54725 363 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 GP2P55259 537 aaKnown RBP12.26□□□□□ -0.45
NUP88-201ENST00000225696 OXCT1P55809 520 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 ERVPABLB-1P60509 514 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 ERVK-8P63133 956 aa12.26□□□□□ -0.45
NUP88-201ENST00000225696 CTF1Q16619 201 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms