RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 FBXL12Q9NXK8 326 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 COPG2Q9UBF2 871 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 COL1A1P02452 1464 aaPredicted RBP18.28■□□□□ 0.52
CLIP2-201ENST00000223398 RFC2P35250 354 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 HSPB3Q12988 150 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 C16orf72Q14CZ0 275 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 AMIGO2Q86SJ2 522 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 TEPSINQ96N21 525 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 SLC9A7Q96T83 725 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 PLLPQ9Y342 182 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 A0A0G2JN53 185 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 PSMG1O95456 288 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 PGDP52209 483 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 CLCQ05315 142 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 SLC35G1Q2M3R5 365 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 LDLRAP1Q5SW96 308 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 ANO7Q6IWH7 933 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 FUKQ8N0W3 1084 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 C12orf76Q8N812 135 aaPredicted RBP18.28■□□□□ 0.52
CLIP2-201ENST00000223398 LEMD2Q8NC56 503 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 DDHD1Q8NEL9 900 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 BCO2Q9BYV7 579 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 MYRFQ9Y2G1 1151 aa18.28■□□□□ 0.52
CLIP2-201ENST00000223398 NBNO60934 754 aa18.27■□□□□ 0.52
CLIP2-201ENST00000223398 UNGP13051 313 aaPredicted RBP18.27■□□□□ 0.52
CLIP2-201ENST00000223398 CYP4B1P13584 511 aa18.27■□□□□ 0.52
CLIP2-201ENST00000223398 HLA-EP13747 358 aa18.27■□□□□ 0.52
CLIP2-201ENST00000223398 NSG1P42857 185 aa18.27■□□□□ 0.52
CLIP2-201ENST00000223398 TNK2Q07912 1038 aa18.27■□□□□ 0.52
CLIP2-201ENST00000223398 SPIRE1Q08AE8 756 aa18.27■□□□□ 0.52
CLIP2-201ENST00000223398 SLC13A2Q13183 592 aa18.27■□□□□ 0.52
CLIP2-201ENST00000223398 RALGPS2Q86X27 583 aaPredicted RBP18.27■□□□□ 0.52
CLIP2-201ENST00000223398 KCT2Q8NC54 265 aa18.27■□□□□ 0.52
CLIP2-201ENST00000223398 SRFBP1Q8NEF9 429 aaKnown RBP18.27■□□□□ 0.52
CLIP2-201ENST00000223398 SLC22A17Q8WUG5 538 aa18.27■□□□□ 0.52
CLIP2-201ENST00000223398 ACDQ96AP0 544 aa18.27■□□□□ 0.52
CLIP2-201ENST00000223398 PTCD3Q96EY7 689 aaKnown RBP18.27■□□□□ 0.52
CLIP2-201ENST00000223398 SPRTNQ9H040 489 aaPredicted RBP18.27■□□□□ 0.52
CLIP2-201ENST00000223398 CFAP20Q9Y6A4 193 aaKnown RBP18.27■□□□□ 0.52
CLIP2-201ENST00000223398 U3KQV3 271 aa18.27■□□□□ 0.52
CLIP2-201ENST00000223398 HLA-DQB2P05538 268 aa18.27■□□□□ 0.52
CLIP2-201ENST00000223398 CDH5P33151 784 aaPredicted RBP18.27■□□□□ 0.52
CLIP2-201ENST00000223398 KIR3DL1P43629 444 aa18.27■□□□□ 0.52
CLIP2-201ENST00000223398 RSBN1Q5VWQ0 802 aaPredicted RBP18.27■□□□□ 0.52
CLIP2-201ENST00000223398 FSTL4Q6MZW2 842 aa18.27■□□□□ 0.52
CLIP2-201ENST00000223398 ZMIZ2Q8NF64 920 aa18.27■□□□□ 0.52
CLIP2-201ENST00000223398 BCL2L14Q9BZR8 327 aa18.27■□□□□ 0.52
CLIP2-201ENST00000223398 PALMDQ9NP74 551 aa18.27■□□□□ 0.52
CLIP2-201ENST00000223398 SORCS3Q9UPU3 1222 aa18.27■□□□□ 0.52
CLIP2-201ENST00000223398 ANKRD26Q9UPS8 1709 aa18.27■□□□□ 0.52
CLIP2-201ENST00000223398 OR4F21O95013 312 aa18.27■□□□□ 0.52
CLIP2-201ENST00000223398 TYRP14679 529 aa18.27■□□□□ 0.52
CLIP2-201ENST00000223398 TPP2P29144 1249 aaPredicted RBP18.27■□□□□ 0.52
CLIP2-201ENST00000223398 CRHR1P34998 444 aa18.27■□□□□ 0.52
CLIP2-201ENST00000223398 SMIM11AP58511 58 aa18.27■□□□□ 0.52
CLIP2-201ENST00000223398 IL23RQ5VWK5 629 aa18.27■□□□□ 0.52
CLIP2-201ENST00000223398 SNRNP27Q8WVK2 155 aaKnown RBP18.27■□□□□ 0.52
CLIP2-201ENST00000223398 J3KR12 359 aa18.27■□□□□ 0.51
CLIP2-201ENST00000223398 PIGRP01833 764 aa18.27■□□□□ 0.51
CLIP2-201ENST00000223398 SERPINA6P08185 405 aa18.27■□□□□ 0.51
CLIP2-201ENST00000223398 AHI1Q8N157 1196 aa18.27■□□□□ 0.51
CLIP2-201ENST00000223398 MREGQ8N565 214 aa18.27■□□□□ 0.51
CLIP2-201ENST00000223398 SHDQ96IW2 340 aa18.27■□□□□ 0.51
CLIP2-201ENST00000223398 TRMOQ9BU70 441 aa18.27■□□□□ 0.51
CLIP2-201ENST00000223398 SEC14L3Q9UDX4 400 aa18.27■□□□□ 0.51
CLIP2-201ENST00000223398 KIF1CO43896 1103 aaKnown RBP18.26■□□□□ 0.51
CLIP2-201ENST00000223398 F7P08709 466 aaPredicted RBP18.26■□□□□ 0.51
CLIP2-201ENST00000223398 HOXB2P14652 356 aa18.26■□□□□ 0.51
CLIP2-201ENST00000223398 LIMK2P53671 638 aa18.26■□□□□ 0.51
CLIP2-201ENST00000223398 TRIM25Q14258 630 aaKnown RBP18.26■□□□□ 0.51
CLIP2-201ENST00000223398 CLVS1Q8IUQ0 354 aaPredicted RBP18.26■□□□□ 0.51
CLIP2-201ENST00000223398 ZNF461Q8TAF7 563 aa18.26■□□□□ 0.51
CLIP2-201ENST00000223398 DLG3Q92796 817 aa18.26■□□□□ 0.51
CLIP2-201ENST00000223398 MIEF2Q96C03 454 aa18.26■□□□□ 0.51
CLIP2-201ENST00000223398 STMN3Q9NZ72 180 aa18.26■□□□□ 0.51
CLIP2-201ENST00000223398 MTMR11A4FU01 709 aa18.26■□□□□ 0.51
CLIP2-201ENST00000223398 SAP18O00422 153 aaKnown RBP18.26■□□□□ 0.51
CLIP2-201ENST00000223398 PTGER3P43115 390 aa18.26■□□□□ 0.51
CLIP2-201ENST00000223398 CACNA2D1P54289 1103 aa18.26■□□□□ 0.51
CLIP2-201ENST00000223398 OLFM1Q99784 485 aa18.26■□□□□ 0.51
CLIP2-201ENST00000223398 CLN6Q9NWW5 311 aa18.26■□□□□ 0.51
CLIP2-201ENST00000223398 HS3ST4Q9Y661 456 aa18.26■□□□□ 0.51
CLIP2-201ENST00000223398 A8MU76 341 aa18.26■□□□□ 0.51
CLIP2-201ENST00000223398 SLC39A4Q6P5W5 647 aa18.26■□□□□ 0.51
CLIP2-201ENST00000223398 TEX47Q8TBZ9 253 aa18.26■□□□□ 0.51
CLIP2-201ENST00000223398 SLC47A1Q96FL8 570 aa18.26■□□□□ 0.51
CLIP2-201ENST00000223398 SOD2P04179 222 aa18.26■□□□□ 0.51
CLIP2-201ENST00000223398 PFKMP08237 780 aa18.26■□□□□ 0.51
CLIP2-201ENST00000223398 NFATC2Q13469 925 aa18.26■□□□□ 0.51
CLIP2-201ENST00000223398 PDZK1Q5T2W1 519 aa18.26■□□□□ 0.51
CLIP2-201ENST00000223398 TRIQKQ629K1 86 aa18.26■□□□□ 0.51
CLIP2-201ENST00000223398 CRYBG2Q8N1P7 616 aa18.26■□□□□ 0.51
CLIP2-201ENST00000223398 AADATQ8N5Z0 425 aa18.26■□□□□ 0.51
CLIP2-201ENST00000223398 PNPLA8Q9NP80 782 aa18.26■□□□□ 0.51
CLIP2-201ENST00000223398 MRPS30Q9NP92 439 aaKnown RBP18.26■□□□□ 0.51
CLIP2-201ENST00000223398 PRR5-ARHGAP8B1AHC4 643 aa18.25■□□□□ 0.51
CLIP2-201ENST00000223398 WBP4O75554 376 aaKnown RBP18.25■□□□□ 0.51
CLIP2-201ENST00000223398 CCNA2P20248 432 aa18.25■□□□□ 0.51
CLIP2-201ENST00000223398 ARHGAP8P85298 464 aa18.25■□□□□ 0.51
CLIP2-201ENST00000223398 VWA5B1Q5TIE3 1220 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms