RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 XPNPEP1Q9NQW7 623 aa18.77■□□□□ 0.6
SMPD3-201ENST00000219334 HMGXB4Q9UGU5 601 aa18.77■□□□□ 0.6
SMPD3-201ENST00000219334 EGFL7Q9UHF1 273 aa18.77■□□□□ 0.6
SMPD3-201ENST00000219334 SNX10Q9Y5X0 201 aa18.77■□□□□ 0.6
SMPD3-201ENST00000219334 A0A0U1RQJ8 604 aa18.77■□□□□ 0.59
SMPD3-201ENST00000219334 C2CD4BA6NLJ0 364 aa18.77■□□□□ 0.59
SMPD3-201ENST00000219334 FZD9O00144 591 aa18.77■□□□□ 0.59
SMPD3-201ENST00000219334 UNC5CO95185 931 aa18.77■□□□□ 0.59
SMPD3-201ENST00000219334 CSKP41240 450 aa18.77■□□□□ 0.59
SMPD3-201ENST00000219334 PRR5P85299 388 aa18.77■□□□□ 0.59
SMPD3-201ENST00000219334 ECT2LQ008S8 904 aa18.77■□□□□ 0.59
SMPD3-201ENST00000219334 PPIDQ08752 370 aaKnown RBP18.77■□□□□ 0.59
SMPD3-201ENST00000219334 PIK3C3Q8NEB9 887 aa18.77■□□□□ 0.59
SMPD3-201ENST00000219334 TDRD1Q9BXT4 1180 aaKnown RBP18.77■□□□□ 0.59
SMPD3-201ENST00000219334 PRPF19Q9UMS4 504 aaKnown RBP18.77■□□□□ 0.59
SMPD3-201ENST00000219334 GRIN2DO15399 1336 aa18.77■□□□□ 0.59
SMPD3-201ENST00000219334 IRGMA1A4Y4 181 aa18.77■□□□□ 0.59
SMPD3-201ENST00000219334 IRAK2O43187 625 aa18.77■□□□□ 0.59
SMPD3-201ENST00000219334 PI15O43692 258 aa18.77■□□□□ 0.59
SMPD3-201ENST00000219334 POU5F1Q01860 360 aaKnown RBP18.77■□□□□ 0.59
SMPD3-201ENST00000219334 LIN54Q6MZP7 749 aa18.77■□□□□ 0.59
SMPD3-201ENST00000219334 ZMIZ2Q8NF64 920 aa18.77■□□□□ 0.59
SMPD3-201ENST00000219334 OR7A2PQ8NGA2 310 aa18.77■□□□□ 0.59
SMPD3-201ENST00000219334 TFAP2BQ92481 460 aa18.77■□□□□ 0.59
SMPD3-201ENST00000219334 OR2AG1Q9H205 316 aa18.77■□□□□ 0.59
SMPD3-201ENST00000219334 EPB41L1Q9H4G0 881 aa18.77■□□□□ 0.59
SMPD3-201ENST00000219334 CNOT6Q9ULM6 557 aaKnown RBP18.77■□□□□ 0.59
SMPD3-201ENST00000219334 B3GALT2O43825 422 aa18.76■□□□□ 0.59
SMPD3-201ENST00000219334 TGDSO95455 350 aa18.76■□□□□ 0.59
SMPD3-201ENST00000219334 ENPEPQ07075 957 aa18.76■□□□□ 0.59
SMPD3-201ENST00000219334 RIT1Q92963 219 aa18.76■□□□□ 0.59
SMPD3-201ENST00000219334 AZIN2Q96A70 460 aa18.76■□□□□ 0.59
SMPD3-201ENST00000219334 WDR26Q9H7D7 661 aa18.76■□□□□ 0.59
SMPD3-201ENST00000219334 NEUROD4Q9HD90 331 aa18.76■□□□□ 0.59
SMPD3-201ENST00000219334 IKZF2Q9UKS7 526 aa18.76■□□□□ 0.59
SMPD3-201ENST00000219334 TIMM22Q9Y584 194 aa18.76■□□□□ 0.59
SMPD3-201ENST00000219334 CCL22O00626 93 aa18.76■□□□□ 0.59
SMPD3-201ENST00000219334 POLR2JP52435 117 aaKnown RBP18.76■□□□□ 0.59
SMPD3-201ENST00000219334 MPP1Q00013 466 aa18.76■□□□□ 0.59
SMPD3-201ENST00000219334 SLC13A2Q13183 592 aa18.76■□□□□ 0.59
SMPD3-201ENST00000219334 ATP1A4Q13733 1029 aa18.76■□□□□ 0.59
SMPD3-201ENST00000219334 GTF2H2Q13888 395 aa18.76■□□□□ 0.59
SMPD3-201ENST00000219334 HEPACAMQ14CZ8 416 aa18.76■□□□□ 0.59
SMPD3-201ENST00000219334 SUZ12Q15022 739 aaKnown RBP18.76■□□□□ 0.59
SMPD3-201ENST00000219334 GTF2H2CQ6P1K8 395 aa18.76■□□□□ 0.59
SMPD3-201ENST00000219334 CELF5Q8N6W0 485 aaKnown RBP18.76■□□□□ 0.59
SMPD3-201ENST00000219334 PNPT1Q8TCS8 783 aaKnown RBP18.76■□□□□ 0.59
SMPD3-201ENST00000219334 PTPN18Q99952 460 aa18.76■□□□□ 0.59
SMPD3-201ENST00000219334 GMEB2Q9UKD1 530 aa18.76■□□□□ 0.59
SMPD3-201ENST00000219334 CDH7Q9ULB5 785 aa18.76■□□□□ 0.59
SMPD3-201ENST00000219334 FZD10Q9ULW2 581 aa18.76■□□□□ 0.59
SMPD3-201ENST00000219334 MROH2AA6NES4 1674 aa18.76■□□□□ 0.59
SMPD3-201ENST00000219334 MPSTP25325 297 aa18.76■□□□□ 0.59
SMPD3-201ENST00000219334 CTSOP43234 321 aaPredicted RBP18.76■□□□□ 0.59
SMPD3-201ENST00000219334 ARHGAP1Q07960 439 aa18.76■□□□□ 0.59
SMPD3-201ENST00000219334 KBTBD8Q8NFY9 601 aa18.76■□□□□ 0.59
SMPD3-201ENST00000219334 SCAMP5Q8TAC9 235 aa18.76■□□□□ 0.59
SMPD3-201ENST00000219334 TWIST2Q8WVJ9 160 aa18.76■□□□□ 0.59
SMPD3-201ENST00000219334 PMEPA1Q969W9 287 aa18.76■□□□□ 0.59
SMPD3-201ENST00000219334 CALML5Q9NZT1 146 aa18.76■□□□□ 0.59
SMPD3-201ENST00000219334 TLR6Q9Y2C9 796 aa18.76■□□□□ 0.59
SMPD3-201ENST00000219334 R3HDM2Q9Y2K5 976 aaKnown RBP18.76■□□□□ 0.59
SMPD3-201ENST00000219334 MRC1P22897 1456 aa18.76■□□□□ 0.59
SMPD3-201ENST00000219334 MT-CYBP00156 380 aaPredicted RBP18.76■□□□□ 0.59
SMPD3-201ENST00000219334 CYP4F3Q08477 520 aa18.76■□□□□ 0.59
SMPD3-201ENST00000219334 CAMK1Q14012 370 aa18.76■□□□□ 0.59
SMPD3-201ENST00000219334 ENPP7Q6UWV6 458 aa18.76■□□□□ 0.59
SMPD3-201ENST00000219334 AUTS2Q8WXX7 1259 aa18.76■□□□□ 0.59
SMPD3-201ENST00000219334 NUS1Q96E22 293 aa18.76■□□□□ 0.59
SMPD3-201ENST00000219334 MFSD3Q96ES6 412 aa18.76■□□□□ 0.59
SMPD3-201ENST00000219334 UBE2QL1A1L167 161 aa18.75■□□□□ 0.59
SMPD3-201ENST00000219334 WNT9AO14904 365 aa18.75■□□□□ 0.59
SMPD3-201ENST00000219334 ADH5P11766 374 aa18.75■□□□□ 0.59
SMPD3-201ENST00000219334 CLCQ05315 142 aa18.75■□□□□ 0.59
SMPD3-201ENST00000219334 TRPV3Q8NET8 790 aa18.75■□□□□ 0.59
SMPD3-201ENST00000219334 PIH1D2Q8WWB5 315 aa18.75■□□□□ 0.59
SMPD3-201ENST00000219334 SDCBP2Q9H190 292 aa18.75■□□□□ 0.59
SMPD3-201ENST00000219334 FAM92AA1XBS5 289 aa18.75■□□□□ 0.59
SMPD3-201ENST00000219334 ASNA1O43681 348 aa18.75■□□□□ 0.59
SMPD3-201ENST00000219334 OGNP20774 298 aaKnown RBP18.75■□□□□ 0.59
SMPD3-201ENST00000219334 LCP2Q13094 533 aa18.75■□□□□ 0.59
SMPD3-201ENST00000219334 SH3D19Q5HYK7 790 aa18.75■□□□□ 0.59
SMPD3-201ENST00000219334 SLC22A18Q96BI1 424 aa18.75■□□□□ 0.59
SMPD3-201ENST00000219334 B3GALT6Q96L58 329 aa18.75■□□□□ 0.59
SMPD3-201ENST00000219334 MAP4K5Q9Y4K4 846 aa18.75■□□□□ 0.59
SMPD3-201ENST00000219334 LDOC1O95751 146 aaPredicted RBP18.75■□□□□ 0.59
SMPD3-201ENST00000219334 COL6A1P12109 1028 aa18.75■□□□□ 0.59
SMPD3-201ENST00000219334 RPP38P78345 283 aaKnown RBP18.75■□□□□ 0.59
SMPD3-201ENST00000219334 PLEKHG4Q58EX7 1191 aa18.75■□□□□ 0.59
SMPD3-201ENST00000219334 IL23RQ5VWK5 629 aa18.75■□□□□ 0.59
SMPD3-201ENST00000219334 MBLAC2Q68D91 279 aa18.75■□□□□ 0.59
SMPD3-201ENST00000219334 NAIF1Q69YI7 327 aaPredicted RBP18.75■□□□□ 0.59
SMPD3-201ENST00000219334 GALNT7Q86SF2 657 aa18.75■□□□□ 0.59
SMPD3-201ENST00000219334 LRMDAQ9H2I8 198 aa18.75■□□□□ 0.59
SMPD3-201ENST00000219334 CARS2Q9HA77 564 aaKnown RBP18.75■□□□□ 0.59
SMPD3-201ENST00000219334 PLLPQ9Y342 182 aa18.75■□□□□ 0.59
SMPD3-201ENST00000219334 ARHGEF28Q8N1W1 1705 aaKnown RBP18.75■□□□□ 0.59
SMPD3-201ENST00000219334 CPED1A4D0V7 1026 aa18.75■□□□□ 0.59
SMPD3-201ENST00000219334 TMEM150CB9EJG8 249 aa18.75■□□□□ 0.59
SMPD3-201ENST00000219334 ADGRF1Q5T601 910 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 670 ms