RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 GRID2O43424 1007 aa26.87■■□□□ 1.89
CHMP4B-201ENST00000217402 IVLP07476 585 aa26.87■■□□□ 1.89
CHMP4B-201ENST00000217402 GPR89BP0CG08 455 aa26.87■■□□□ 1.89
CHMP4B-201ENST00000217402 RPS3P23396 243 aaKnown RBP eCLIP26.87■■□□□ 1.89
CHMP4B-201ENST00000217402 NBL1P41271 181 aa26.87■■□□□ 1.89
CHMP4B-201ENST00000217402 ZNF549Q6P9A3 640 aa26.87■■□□□ 1.89
CHMP4B-201ENST00000217402 LRRTM4Q86VH4 590 aa26.87■■□□□ 1.89
CHMP4B-201ENST00000217402 ZC3HC1Q86WB0 502 aaKnown RBP26.87■■□□□ 1.89
CHMP4B-201ENST00000217402 ZNF547Q8IVP9 402 aa26.87■■□□□ 1.89
CHMP4B-201ENST00000217402 CCDC77Q9BR77 488 aa26.87■■□□□ 1.89
CHMP4B-201ENST00000217402 CCDC68Q9H2F9 335 aa26.87■■□□□ 1.89
CHMP4B-201ENST00000217402 KLF15Q9UIH9 416 aa26.87■■□□□ 1.89
CHMP4B-201ENST00000217402 GPSM3Q9Y4H4 160 aa26.87■■□□□ 1.89
CHMP4B-201ENST00000217402 IKBKGQ9Y6K9 419 aa26.87■■□□□ 1.89
CHMP4B-201ENST00000217402 GPR179Q6PRD1 2367 aa26.87■■□□□ 1.89
CHMP4B-201ENST00000217402 IQCF5A8MTL0 148 aa26.86■■□□□ 1.89
CHMP4B-201ENST00000217402 AP2A2O94973 939 aa26.86■■□□□ 1.89
CHMP4B-201ENST00000217402 INHBAP08476 426 aa26.86■■□□□ 1.89
CHMP4B-201ENST00000217402 OR56A5P0C7T3 313 aa26.86■■□□□ 1.89
CHMP4B-201ENST00000217402 ITGB6P18564 788 aa26.86■■□□□ 1.89
CHMP4B-201ENST00000217402 CTSKP43235 329 aa26.86■■□□□ 1.89
CHMP4B-201ENST00000217402 MSH2P43246 934 aa26.86■■□□□ 1.89
CHMP4B-201ENST00000217402 ADARP55265 1226 aaKnown RBP26.86■■□□□ 1.89
CHMP4B-201ENST00000217402 GRIK2Q13002 908 aa26.86■■□□□ 1.89
CHMP4B-201ENST00000217402 GPATCH11Q8N954 259 aa26.86■■□□□ 1.89
CHMP4B-201ENST00000217402 SLC44A1Q8WWI5 657 aa26.86■■□□□ 1.89
CHMP4B-201ENST00000217402 FAM136AQ96C01 138 aa26.86■■□□□ 1.89
CHMP4B-201ENST00000217402 SCARF2Q96GP6 870 aaPredicted RBP26.86■■□□□ 1.89
CHMP4B-201ENST00000217402 RBBP8Q99708 897 aa26.86■■□□□ 1.89
CHMP4B-201ENST00000217402 TCEAL2Q9H3H9 227 aaPredicted RBP26.86■■□□□ 1.89
CHMP4B-201ENST00000217402 RHOJQ9H4E5 214 aa26.86■■□□□ 1.89
CHMP4B-201ENST00000217402 RMI1Q9H9A7 625 aa26.86■■□□□ 1.89
CHMP4B-201ENST00000217402 CAPN10Q9HC96 672 aa26.86■■□□□ 1.89
CHMP4B-201ENST00000217402 TM7SF3Q9NS93 570 aa26.86■■□□□ 1.89
CHMP4B-201ENST00000217402 GMEB2Q9UKD1 530 aa26.86■■□□□ 1.89
CHMP4B-201ENST00000217402 PLAAQ9Y263 795 aa26.86■■□□□ 1.89
CHMP4B-201ENST00000217402 PCDHB1Q9Y5F3 818 aa26.86■■□□□ 1.89
CHMP4B-201ENST00000217402 RASGRP1O95267 797 aa26.85■■□□□ 1.89
CHMP4B-201ENST00000217402 ESR1P03372 595 aa26.85■■□□□ 1.89
CHMP4B-201ENST00000217402 RETP07949 1114 aa26.85■■□□□ 1.89
CHMP4B-201ENST00000217402 NUDT17P0C025 328 aa26.85■■□□□ 1.89
CHMP4B-201ENST00000217402 PKMP14618 531 aaKnown RBP26.85■■□□□ 1.89
CHMP4B-201ENST00000217402 PBLDP30039 288 aaPredicted RBP26.85■■□□□ 1.89
CHMP4B-201ENST00000217402 PRLHRP49683 370 aa26.85■■□□□ 1.89
CHMP4B-201ENST00000217402 CSE1LP55060 971 aaKnown RBP26.85■■□□□ 1.89
CHMP4B-201ENST00000217402 PYCR3Q53H96 274 aa26.85■■□□□ 1.89
CHMP4B-201ENST00000217402 RBM20Q5T481 1227 aaKnown RBP26.85■■□□□ 1.89
CHMP4B-201ENST00000217402 TCEAL6Q6IPX3 200 aa26.85■■□□□ 1.89
CHMP4B-201ENST00000217402 SLC23A3Q6PIS1 610 aa26.85■■□□□ 1.89
CHMP4B-201ENST00000217402 PHACTR4Q8IZ21 702 aa26.85■■□□□ 1.89
CHMP4B-201ENST00000217402 KRT222Q8N1A0 295 aa26.85■■□□□ 1.89
CHMP4B-201ENST00000217402 TCEAL3Q969E4 200 aa26.85■■□□□ 1.89
CHMP4B-201ENST00000217402 VPS39Q96JC1 886 aa26.85■■□□□ 1.89
CHMP4B-201ENST00000217402 ZNF514Q96K75 400 aaPredicted RBP26.85■■□□□ 1.89
CHMP4B-201ENST00000217402 MCMBPQ9BTE3 642 aa26.85■■□□□ 1.89
CHMP4B-201ENST00000217402 FAM8A1Q9UBU6 413 aa26.85■■□□□ 1.89
CHMP4B-201ENST00000217402 SLC6A14Q9UN76 642 aa26.85■■□□□ 1.89
CHMP4B-201ENST00000217402 SMIM23A6NLE4 172 aa26.84■■□□□ 1.89
CHMP4B-201ENST00000217402 NIPSNAP2O75323 286 aa26.84■■□□□ 1.89
CHMP4B-201ENST00000217402 HK3P52790 923 aa26.84■■□□□ 1.89
CHMP4B-201ENST00000217402 IFFO1Q0D2I5 559 aa26.84■■□□□ 1.89
CHMP4B-201ENST00000217402 BCL7AQ4VC05 210 aa26.84■■□□□ 1.89
CHMP4B-201ENST00000217402 GRTP1Q5TC63 336 aa26.84■■□□□ 1.89
CHMP4B-201ENST00000217402 CHST15Q7LFX5 561 aaPredicted RBP26.84■■□□□ 1.89
CHMP4B-201ENST00000217402 LKAAEAR1Q8TD35 194 aa26.84■■□□□ 1.89
CHMP4B-201ENST00000217402 OR2M4Q96R27 311 aa26.84■■□□□ 1.89
CHMP4B-201ENST00000217402 TRIM16O95361 564 aa26.83■■□□□ 1.89
CHMP4B-201ENST00000217402 TNFP01375 233 aa26.83■■□□□ 1.89
CHMP4B-201ENST00000217402 JUNDP17535 347 aa26.83■■□□□ 1.89
CHMP4B-201ENST00000217402 GCAP28676 217 aa26.83■■□□□ 1.89
CHMP4B-201ENST00000217402 ACVR1CQ8NER5 493 aa26.83■■□□□ 1.89
CHMP4B-201ENST00000217402 DCAKDQ8WVC6 231 aa26.83■■□□□ 1.89
CHMP4B-201ENST00000217402 AARSD1Q9BTE6 412 aaKnown RBP26.83■■□□□ 1.89
CHMP4B-201ENST00000217402 APOBEC3BQ9UH17 382 aaKnown RBP26.83■■□□□ 1.89
CHMP4B-201ENST00000217402 GPR34Q9UPC5 381 aa26.83■■□□□ 1.89
CHMP4B-201ENST00000217402 PLEKHM1Q9Y4G2 1056 aa26.83■■□□□ 1.89
CHMP4B-201ENST00000217402 DGKBQ9Y6T7 804 aa26.83■■□□□ 1.89
CHMP4B-201ENST00000217402 QSOX1O00391 747 aa26.83■■□□□ 1.88
CHMP4B-201ENST00000217402 KMOO15229 486 aa26.83■■□□□ 1.88
CHMP4B-201ENST00000217402 CSF2P04141 144 aa26.83■■□□□ 1.88
CHMP4B-201ENST00000217402 ACP5P13686 325 aa26.83■■□□□ 1.88
CHMP4B-201ENST00000217402 NME1P15531 152 aaKnown RBP26.83■■□□□ 1.88
CHMP4B-201ENST00000217402 SAT1P21673 171 aa26.83■■□□□ 1.88
CHMP4B-201ENST00000217402 SPRP35270 261 aaPredicted RBP26.83■■□□□ 1.88
CHMP4B-201ENST00000217402 SLCO1A2P46721 670 aa26.83■■□□□ 1.88
CHMP4B-201ENST00000217402 LIMK2P53671 638 aa26.83■■□□□ 1.88
CHMP4B-201ENST00000217402 BMPR2Q13873 1038 aa26.83■■□□□ 1.88
CHMP4B-201ENST00000217402 C11orf96Q7Z7L8 435 aa26.83■■□□□ 1.88
CHMP4B-201ENST00000217402 EPS8L3Q8TE67 593 aaKnown RBP26.83■■□□□ 1.88
CHMP4B-201ENST00000217402 ELMO2Q96JJ3 720 aa26.83■■□□□ 1.88
CHMP4B-201ENST00000217402 SLC13A1Q9BZW2 595 aa26.83■■□□□ 1.88
CHMP4B-201ENST00000217402 MTO1Q9Y2Z2 717 aaKnown RBP26.83■■□□□ 1.88
CHMP4B-201ENST00000217402 LRP4O75096 1905 aa26.82■■□□□ 1.88
CHMP4B-201ENST00000217402 TP53BP1Q12888 1972 aaPredicted RBP26.82■■□□□ 1.88
CHMP4B-201ENST00000217402 FAM95CA0A1B0GW59 222 aa26.82■■□□□ 1.88
CHMP4B-201ENST00000217402 POP7O75817 140 aaKnown RBP26.82■■□□□ 1.88
CHMP4B-201ENST00000217402 LMNAP02545 664 aaKnown RBP26.82■■□□□ 1.88
CHMP4B-201ENST00000217402 FTH1P02794 183 aa26.82■■□□□ 1.88
CHMP4B-201ENST00000217402 IRX4P78413 519 aa26.82■■□□□ 1.88
CHMP4B-201ENST00000217402 INSCQ1MX18 579 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms