RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 NELFEP18615 380 aaKnown RBP13.44□□□□□ -0.26
SF3A1-201ENST00000215793 HSPA7P48741 367 aa13.44□□□□□ -0.26
SF3A1-201ENST00000215793 DAOAP59103 153 aa13.44□□□□□ -0.26
SF3A1-201ENST00000215793 SNAPC1Q16533 368 aa13.44□□□□□ -0.26
SF3A1-201ENST00000215793 TAC4Q86UU9 113 aa13.44□□□□□ -0.26
SF3A1-201ENST00000215793 VANGL1Q8TAA9 524 aaPredicted RBP13.44□□□□□ -0.26
SF3A1-201ENST00000215793 GIPC3Q8TF64 312 aa13.44□□□□□ -0.26
SF3A1-201ENST00000215793 NDRG1Q92597 394 aaKnown RBP13.44□□□□□ -0.26
SF3A1-201ENST00000215793 PCED1BQ96HM7 432 aa13.44□□□□□ -0.26
SF3A1-201ENST00000215793 NUSAP1Q9BXS6 441 aaKnown RBP13.44□□□□□ -0.26
SF3A1-201ENST00000215793 CCDC177Q9NQR7 707 aaPredicted RBP13.44□□□□□ -0.26
SF3A1-201ENST00000215793 DMAC2Q9NW81 257 aa13.44□□□□□ -0.26
SF3A1-201ENST00000215793 NOCTQ9UK39 431 aaKnown RBP13.44□□□□□ -0.26
SF3A1-201ENST00000215793 CNTN6Q9UQ52 1028 aa13.44□□□□□ -0.26
SF3A1-201ENST00000215793 MPZL2O60487 215 aa13.44□□□□□ -0.26
SF3A1-201ENST00000215793 NPHS1O60500 1241 aa13.44□□□□□ -0.26
SF3A1-201ENST00000215793 MTRF1O75570 445 aaKnown RBP13.44□□□□□ -0.26
SF3A1-201ENST00000215793 ZBTB11O95625 1053 aaPredicted RBP13.44□□□□□ -0.26
SF3A1-201ENST00000215793 SAGP10523 405 aaPredicted RBP13.44□□□□□ -0.26
SF3A1-201ENST00000215793 RPS9P46781 194 aaKnown RBP13.44□□□□□ -0.26
SF3A1-201ENST00000215793 CLCNKBP51801 687 aa13.44□□□□□ -0.26
SF3A1-201ENST00000215793 POU5F1Q01860 360 aaKnown RBP13.44□□□□□ -0.26
SF3A1-201ENST00000215793 ANKRD22Q5VYY1 191 aa13.44□□□□□ -0.26
SF3A1-201ENST00000215793 PLPP4Q5VZY2 271 aa13.44□□□□□ -0.26
SF3A1-201ENST00000215793 RFWD3Q6PCD5 774 aa13.44□□□□□ -0.26
SF3A1-201ENST00000215793 ZZZ3Q8IYH5 903 aa13.44□□□□□ -0.26
SF3A1-201ENST00000215793 SPATA22Q8NHS9 363 aa13.44□□□□□ -0.26
SF3A1-201ENST00000215793 FAM81AQ8TBF8 368 aa13.44□□□□□ -0.26
SF3A1-201ENST00000215793 BRSK1Q8TDC3 778 aa13.44□□□□□ -0.26
SF3A1-201ENST00000215793 SNX27Q96L92 541 aa13.44□□□□□ -0.26
SF3A1-201ENST00000215793 DEFB118Q96PH6 123 aa13.44□□□□□ -0.26
SF3A1-201ENST00000215793 TTYH3Q9C0H2 523 aa13.44□□□□□ -0.26
SF3A1-201ENST00000215793 ARHGEF33A8MVX0 844 aa13.44□□□□□ -0.26
SF3A1-201ENST00000215793 RGS8P57771 180 aaPredicted RBP13.44□□□□□ -0.26
SF3A1-201ENST00000215793 FUT10Q6P4F1 479 aa13.44□□□□□ -0.26
SF3A1-201ENST00000215793 CHST9Q7L1S5 443 aa13.44□□□□□ -0.26
SF3A1-201ENST00000215793 ATG10Q9H0Y0 220 aa13.44□□□□□ -0.26
SF3A1-201ENST00000215793 TLE6Q9H808 572 aa13.44□□□□□ -0.26
SF3A1-201ENST00000215793 IGSF9Q9P2J2 1179 aa13.44□□□□□ -0.26
SF3A1-201ENST00000215793 GTF2H2Q13888 395 aa13.44□□□□□ -0.26
SF3A1-201ENST00000215793 GTF2H2CQ6P1K8 395 aa13.44□□□□□ -0.26
SF3A1-201ENST00000215793 GLB1L3Q8NCI6 653 aaPredicted RBP13.44□□□□□ -0.26
SF3A1-201ENST00000215793 SMG7Q92540 1137 aaKnown RBP13.44□□□□□ -0.26
SF3A1-201ENST00000215793 NTPCRQ9BSD7 190 aaKnown RBP13.44□□□□□ -0.26
SF3A1-201ENST00000215793 RASSF1Q9NS23 344 aa13.44□□□□□ -0.26
SF3A1-201ENST00000215793 CALML5Q9NZT1 146 aa13.44□□□□□ -0.26
SF3A1-201ENST00000215793 CKLFQ9UBR5 152 aa13.44□□□□□ -0.26
SF3A1-201ENST00000215793 CNOT6Q9ULM6 557 aaKnown RBP13.44□□□□□ -0.26
SF3A1-201ENST00000215793 RBM7Q9Y580 266 aaKnown RBP13.44□□□□□ -0.26
SF3A1-201ENST00000215793 RBM47A0AV96 593 aaKnown RBP13.43□□□□□ -0.26
SF3A1-201ENST00000215793 ANGPTL1O95841 491 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 PRKD1Q15139 912 aaPredicted RBP13.43□□□□□ -0.26
SF3A1-201ENST00000215793 C5orf22Q49AR2 442 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 ESRP1Q6NXG1 681 aaKnown RBP13.43□□□□□ -0.26
SF3A1-201ENST00000215793 FAM131AQ6UXB0 335 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 BTN2A1Q7KYR7 527 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 SLC22A17Q8WUG5 538 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 TLCD1Q96CP7 247 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 TCF25Q9BQ70 676 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 EQTNQ9NQ60 294 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 MROH1Q8NDA8 1641 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 FADS2O95864 444 aaKnown RBP13.43□□□□□ -0.26
SF3A1-201ENST00000215793 CD48P09326 243 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 SPATA31D3P0C874 917 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 MAPK12P53778 367 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 CHIT1Q13231 466 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 DCST1Q5T197 706 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 CLEC6AQ6EIG7 209 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 FBXO42Q6P3S6 717 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 SPATA31D4Q6ZUB0 917 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 FAM124AQ86V42 546 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 TFAP2BQ92481 460 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 BRINP2Q9C0B6 783 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 ETAA1Q9NY74 926 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 PCDHGC4Q9Y5F7 938 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 TMEM131LA2VDJ0 1609 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 KIAA0930Q6ICG6 404 aaPredicted RBP13.43□□□□□ -0.26
SF3A1-201ENST00000215793 GALNT13Q8IUC8 556 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 CRYBG2Q8N1P7 616 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 MPP5Q8N3R9 675 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 OR7D4Q8NG98 312 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 PNPT1Q8TCS8 783 aaKnown RBP13.43□□□□□ -0.26
SF3A1-201ENST00000215793 C5orf34Q96MH7 638 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 COQ4Q9Y3A0 265 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 BTBD19C9JJ37 291 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 CLDN4O14493 209 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 LYNP07948 512 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 PTX3P26022 381 aaPredicted RBP13.43□□□□□ -0.26
SF3A1-201ENST00000215793 TEAD4Q15561 434 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 LDB1Q86U70 411 aaPredicted RBP13.43□□□□□ -0.26
SF3A1-201ENST00000215793 DAW1Q8N136 415 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 C2orf15Q8WU43 125 aaKnown RBP13.43□□□□□ -0.26
SF3A1-201ENST00000215793 PLD4Q96BZ4 506 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 TIMMDC1Q9NPL8 285 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 GTF2IRD1Q9UHL9 959 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 FBXW11Q9UKB1 542 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 PCDHGA11Q9Y5H2 935 aa13.43□□□□□ -0.26
SF3A1-201ENST00000215793 FAM240BA0A1B0GVZ2 78 aa13.42□□□□□ -0.26
SF3A1-201ENST00000215793 XKRYO14609 159 aa13.42□□□□□ -0.26
SF3A1-201ENST00000215793 EPHX1P07099 455 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms