RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Tbrg4Q91YM4 630 aaKnown RBP22.45■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Prokr1Q9JKL1 393 aa22.45■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Lmx1aQ9JKU8 382 aa22.45■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Pdcd7Q9WTY1 482 aa22.45■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Rbck1Q9WUB0 508 aa22.45■■□□□ 1.18
Scn1b-201ENSMUST00000098548 ClcnkbQ9WUB6 687 aa22.45■■□□□ 1.18
Scn1b-201ENSMUST00000098548 FscbA1EGX6 1074 aa22.44■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Zbed5B2RPU8 756 aa22.44■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Sult3a1O35403 293 aa22.44■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Hoxa4P06798 285 aa22.44■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Gstm1P10649 218 aa22.44■■□□□ 1.18
Scn1b-201ENSMUST00000098548 GzmgP13366 248 aa22.44■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Rps14P62264 151 aaKnown RBP22.44■■□□□ 1.18
Scn1b-201ENSMUST00000098548 FerP70451 823 aa22.44■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Cry1P97784 606 aa22.44■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Arhgef15Q5FWH6 849 aa22.44■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Gm11492Q5ND19 536 aa22.44■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Bpifb1Q61114 474 aa22.44■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Wasf2Q8BH43 497 aa22.44■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Echs1Q8BH95 290 aaKnown RBP22.44■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Dtd2Q8BHA3 168 aa22.44■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Ttc34Q8C0Q3 554 aa22.44■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Sphk1Q8CI15 382 aa22.44■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Recql5Q8VID5 982 aa22.44■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Slc44a3Q921V7 656 aa22.44■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Vmn1r49Q9WUF1 310 aa22.44■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Wdfy3Q6VNB8 3508 aa22.44■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Col9a3A2ACT7 680 aa22.43■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Pabpc4lG5E8X2 370 aa22.43■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Hoxa9P09631 271 aa22.43■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Slc11a1P41251 548 aa22.43■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Gpr174Q3U507 335 aa22.43■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Ankrd34bQ3UUF8 508 aa22.43■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Adora2aQ60613 410 aa22.43■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Hsd3b5Q61694 373 aa22.43■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Arhgap20Q6IFT4 1182 aa22.43■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Snx31Q6P8Y7 439 aa22.43■■□□□ 1.18
Scn1b-201ENSMUST00000098548 HhipQ7TN16 700 aa22.43■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Lats2Q7TSJ6 1042 aa22.43■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Ccdc184Q8BMK5 191 aa22.43■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Hid1Q8R1F6 788 aa22.43■■□□□ 1.18
Scn1b-201ENSMUST00000098548 BsndQ8VIM4 307 aa22.43■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Tmco1Q921L3 188 aaKnown RBP22.43■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Phospho2Q9D9M5 241 aa22.43■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Nif3l1Q9EQ80 376 aa22.43■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Slc29a1Q9JIM1 460 aa22.43■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Gm6685D3YYP3 228 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Olfr694K7N641 315 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 GzmkO35205 263 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 P01679 107 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Gucy2eP52785 1108 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 ChatQ03059 641 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 A1bgQ19LI2 512 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Tmem65Q4VAE3 234 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Jak2Q62120 1129 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Tmem151aQ6GQT5 468 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Mapkap1Q8BKH7 522 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Kiaa1671Q8BRV5 308 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Pex5lQ8C437 567 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 4932414N04RikQ8CEQ9 752 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Stx18Q8VDS8 334 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Lgals12Q91VD1 314 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 SncbQ91ZZ3 133 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Glod4Q9CPV4 298 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Pmf1Q9CPV5 202 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Senp8Q9D2Z4 221 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 DynapQ9D7M5 161 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Dach1Q9QYB2 751 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Ighv11-1A0A075B5R6 117 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Igkv12-98A0A0G2JGF9 115 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Slfn8B1ARD8 910 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Olfr726E9Q8X3 321 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Cyp4f17G3UW78 524 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Pik3r2O08908 722 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Galnt1O08912 559 aaKnown RBP22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Pdlim1O70400 327 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Mnat1P51949 309 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Olfr725Q05A45 321 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Zdhhc20Q5Y5T1 380 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Dlx3Q64205 287 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Casc4Q6P2L7 435 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Ddx51Q6P9R1 639 aaKnown RBP22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 InavaQ7TN12 663 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Zfyve1Q810J8 777 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Zcchc4Q8BKW4 512 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 4932411N23RikQ8C0S0 470 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Tfb1mQ8JZM0 345 aaKnown RBP22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Cyp4f16Q99N17 524 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Gucy1a3Q9ERL9 691 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Krt6bQ9Z331 562 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Mzf1S4R1L6 814 aa22.42■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Gm28729A0A1B0GSW2 409 aa22.41■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Vmn2r118E9Q1C1 853 aa22.41■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Il1aP01582 270 aa22.41■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Akr1b7P21300 316 aa22.41■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Gabrg2P22723 474 aa22.41■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Hmx2P43687 273 aa22.41■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Polr2lP62876 67 aa22.41■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Mpp1P70290 466 aa22.41■■□□□ 1.18
Scn1b-201ENSMUST00000098548 Ldb1P70662 411 aa22.41■■□□□ 1.18
Retrieved 100 of 22,080 RNA–protein pairs in 34.1 ms