RNA–Protein interactions for RNA: ENSMUST00000048077.11

Lime1-201, Transcript of Lck-interacting transmembrane adapter 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lime1, Length 1,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1-201ENSMUST00000048077 VarsQ9Z1Q9 1263 aaKnown RBP13.79□□□□□ -0.2
Lime1-201ENSMUST00000048077 PikfyveQ9Z1T6 2097 aa13.79□□□□□ -0.2
Lime1-201ENSMUST00000048077 1600015I10RikE9Q745 711 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Tsga10ipF7A1F0 157 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Speer4cG3UXD1 256 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Pabpc4lG5E8X2 370 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Gm10354K7N6A0 256 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Vmn2r61L7N2B8 865 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Polr2jO08740 117 aaKnown RBP13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 E2f3O35261 457 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 P01665 111 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 P01666 111 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 En1P09065 401 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Folr1P35846 255 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Pnrc1Q3TWH3 297 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Cmpk2Q3U5Q7 447 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Znrf3Q5SSZ7 913 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Rab3ipQ68EF0 428 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Nlgn2Q69ZK9 836 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Tnpo3Q6P2B1 923 aaKnown RBP13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Tmcc2Q80W04 706 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Fam72aQ8BFZ8 149 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Coq4Q8BGB8 266 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Serpinb9dQ8BMT0 377 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Cfap61Q8CEL2 1252 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Spp2Q8K1I3 203 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Chchd4Q8VEA4 139 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 L3hypdhQ9CXA2 354 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Ribc2Q9D4Q1 309 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Slc28a3Q9ERH8 703 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Slc7a8Q9QXW9 531 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Mad2l1Q9Z1B5 205 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Numa1E9Q7G0 2094 aaKnown RBP13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Ighv11-2A0A075B5R8 117 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Ralgps1A2AR50 585 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Rrn3B2RS91 656 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Tmem233D3Z1U7 110 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Apol11bE9PUZ0 337 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Speer4f2E9Q366 295 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Neurod4O09105 330 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Grem1O70326 184 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Scg5P12961 212 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 SrgnP13609 152 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 F2P19221 618 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Mkl2P59759 1080 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Rps24P62849 133 aaKnown RBP13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 IdsQ08890 552 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Rbbp7Q60973 425 aaKnown RBP13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Tnfaip2Q61333 691 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Il1rapQ61730 570 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Brsk2Q69Z98 735 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Ces2bQ6PDB7 556 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Olfr366Q7TRY4 309 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 C2cd4bQ80XU5 340 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Q810N5 247 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Smoc1Q8BLY1 463 aaKnown RBP13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Trmt2bQ8BQJ6 493 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 GancQ8BVW0 898 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 ThtpaQ8JZL3 224 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Pex19Q8VCI5 299 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Olfr846Q8VET8 312 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 AmotQ8VHG2 1126 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Syt12Q920N7 421 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Rsl24d1Q99L28 163 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Scd3Q99PL7 359 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Glod5Q9D8I3 148 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Cyb5r1Q9DB73 305 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 Htr3bQ9JHJ5 437 aa13.78□□□□□ -0.2
Lime1-201ENSMUST00000048077 TriobpQ99KW3 2014 aa13.77□□□□□ -0.2
Lime1-201ENSMUST00000048077 4921501E09RikA0A0R4J054 908 aa13.77□□□□□ -0.21
Lime1-201ENSMUST00000048077 Gm20431E9PY39 371 aa13.77□□□□□ -0.21
Lime1-201ENSMUST00000048077 Slc4a5E9Q3M5 1116 aa13.77□□□□□ -0.21
Lime1-201ENSMUST00000048077 Gria2P23819 883 aa13.77□□□□□ -0.21
Lime1-201ENSMUST00000048077 Traf2P39429 501 aa13.77□□□□□ -0.21
Lime1-201ENSMUST00000048077 St14P56677 855 aa13.77□□□□□ -0.21
Lime1-201ENSMUST00000048077 Lzts1P60853 599 aa13.77□□□□□ -0.21
Lime1-201ENSMUST00000048077 Psme2P97372 239 aa13.77□□□□□ -0.21
Lime1-201ENSMUST00000048077 Wbp2P97765 261 aa13.77□□□□□ -0.21
Lime1-201ENSMUST00000048077 Slc45a4Q0P5V9 785 aa13.77□□□□□ -0.21
Lime1-201ENSMUST00000048077 Foxk2Q3UCQ1 651 aa13.77□□□□□ -0.21
Lime1-201ENSMUST00000048077 Zfp868Q3UTQ6 422 aa13.77□□□□□ -0.21
Lime1-201ENSMUST00000048077 Pfdn4Q3UWL8 134 aa13.77□□□□□ -0.21
Lime1-201ENSMUST00000048077 Pcbp2Q61990 362 aaKnown RBP13.77□□□□□ -0.21
Lime1-201ENSMUST00000048077 Cyp2c54Q6XVG2 490 aa13.77□□□□□ -0.21
Lime1-201ENSMUST00000048077 Wdr91Q7TMQ7 748 aa13.77□□□□□ -0.21
Lime1-201ENSMUST00000048077 InavaQ7TN12 663 aa13.77□□□□□ -0.21
Lime1-201ENSMUST00000048077 Gpr142Q7TQN9 365 aa13.77□□□□□ -0.21
Lime1-201ENSMUST00000048077 Spata7Q80VP2 582 aa13.77□□□□□ -0.21
Lime1-201ENSMUST00000048077 StgQ8BM15 349 aa13.77□□□□□ -0.21
Lime1-201ENSMUST00000048077 Tusc3Q8BTV1 347 aa13.77□□□□□ -0.21
Lime1-201ENSMUST00000048077 MfrpQ8K480 584 aa13.77□□□□□ -0.21
Lime1-201ENSMUST00000048077 Kdelr3Q8R1L4 214 aa13.77□□□□□ -0.21
Lime1-201ENSMUST00000048077 Sgip1Q8VD37 806 aa13.77□□□□□ -0.21
Lime1-201ENSMUST00000048077 Hdac11Q91WA3 347 aa13.77□□□□□ -0.21
Lime1-201ENSMUST00000048077 Crtc3Q91X84 619 aa13.77□□□□□ -0.21
Lime1-201ENSMUST00000048077 Dhrs4Q99LB2 279 aa13.77□□□□□ -0.21
Lime1-201ENSMUST00000048077 Rnf146Q9CZW6 359 aa13.77□□□□□ -0.21
Lime1-201ENSMUST00000048077 TesclQ9DAJ7 231 aa13.77□□□□□ -0.21
Lime1-201ENSMUST00000048077 Ccdc97Q9DBT3 340 aa13.77□□□□□ -0.21
Lime1-201ENSMUST00000048077 Trip4Q9QXN3 581 aa13.77□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms