RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Golm1Q91XA2 393 aa16.46■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Tbx4P70325 552 aa16.46■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Gm11437Q5QR91 290 aa16.46■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Trub1Q8C0D0 338 aaKnown RBP16.46■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 FktnQ8R507 461 aa16.46■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Uqcrc1Q9CZ13 480 aaKnown RBP16.46■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Mpp5Q9JLB2 675 aa16.46■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Apc2Q9Z1K7 2274 aa16.46■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Olfr853Q8VGG6 305 aa16.46■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Msl3l2G3X992 371 aa16.46■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Cdh3P10287 822 aa16.46■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Oprl1P35377 367 aa16.46■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Olfm2Q8BM13 448 aa16.46■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Arfrp1Q8BXL7 201 aa16.46■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 RttnQ8R4Y8 2226 aa16.46■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Vmn2r2L7N2E9 908 aa16.46■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Prl2c2P04095 224 aa16.46■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Il1rnP25085 178 aa16.46■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Snai1Q02085 264 aa16.46■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Stmnd1Q6P3A1 279 aa16.46■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 Samd3Q8C4H2 520 aa16.46■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 TrmuQ9DAT5 417 aa16.46■□□□□ 0.23
Ccdc88a-201ENSMUST00000040182 NrlP54846 237 aa16.46■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Serpinf1P97298 417 aa16.46■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Cxcr5Q04683 374 aa16.46■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Pcdhb13Q91Y06 796 aa16.46■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Pdia5Q921X9 517 aa16.46■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 PdgfdQ925I7 370 aa16.46■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Tspan1Q99J59 240 aa16.46■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 PacrglQ9D3X5 248 aa16.46■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Olfr171G5E8J1 314 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Zfyve1Q810J8 777 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Lrrc4cQ8C031 640 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 IgtpQ9DCE9 423 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 SqorQ9R112 450 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Cntnap4Q99P47 1310 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 PrlP06879 226 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Arf4P61750 180 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Timmdc1Q8BUY5 285 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Gm42417Q8K1D0 126 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Mrpl49Q9CQ40 166 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Atp6ap2Q9CYN9 350 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Dnajb2Q9QYI5 324 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 CalcrlQ9R1W5 463 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Fkbp7O54998 218 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 AaasP58742 546 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Mpp1P70290 466 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Fam46cQ5SSF7 391 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Spag1Q80ZX8 901 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Plin5Q8BVZ1 463 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Bhmt2Q91WS4 363 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Tcaf2Q921K8 919 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Mtif3Q9CZD5 276 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Scgb2b17S4R2V3 82 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Gm13128L7MU96 475 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Gm8857L7N291 182 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Mfsd14aP70187 490 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 MyrflQ3UN70 904 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Q6PAC4 1279 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Hmbox1Q8BJA3 419 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Usp43Q8BUM9 1132 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Spon1Q8VCC9 807 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Olfr1352Q8VGX5 309 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Asb17Q8VHP9 295 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 LsrQ99KG5 594 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Rdh11Q9QYF1 316 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Slc25a14Q9Z2B2 325 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 UrodP70697 367 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Znf592Q8BHZ4 1262 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 NoboxQ8VIH1 527 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 TP20293 436 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Tead3P70210 439 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Mamdc2Q8CG85 686 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Asb4Q9WV71 426 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Ikzf2P81183 526 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Zdhhc6Q9CPV7 413 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Det1Q9D0A0 550 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Mrpl45Q9D0Q7 306 aaKnown RBP16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Mfsd10Q9D2V8 456 aaKnown RBP16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Mfsd13bA0A1L1SUA2 455 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Tulp2P46686 562 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Acsl5Q8JZR0 683 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Coq9Q8K1Z0 313 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Chil4Q91Z98 402 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Ubxn6Q99PL6 442 aa16.45■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Olfr391-psA0A0U1RNJ4 312 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Cpsf6Q6NVF9 551 aaKnown RBP16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Pik3cbQ8BTI9 1064 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Taf5Q8C092 801 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Fbxl8Q8CIG9 374 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 DdoQ922Z0 341 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Tex47Q9D5W8 253 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Ccdc166S4R181 449 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Serpine3E9Q6A2 401 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Tsga10ipF7A1F0 157 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Cyth4Q80YW0 393 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Phf23Q8BSN5 401 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Dppa4Q8CCG4 296 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 Olfr1361Q8VFH0 317 aa16.44■□□□□ 0.22
Ccdc88a-201ENSMUST00000040182 4931417E11RikQ9CR05 305 aa16.44■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 36.4 ms