RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Olfr566A0A1B0GST0 319 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Acp4D3YTS9 425 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Slc28a1E9PXX9 648 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 2610001J05RikF2Z3Y9 59 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 PthlhP22858 175 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Rab12P35283 243 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Gp1bbP56400 206 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Cct7P80313 544 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Eef2kmtQ3UZW7 335 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Btg1-ps1Q3V0S2 161 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Btg1-ps2Q3V0X0 161 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Fgfr3Q61851 801 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Kmt5cQ6Q783 468 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Slc8a2Q8K596 921 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Ccdc59Q8R2N0 240 aaKnown RBP11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Spcs2Q9CYN2 226 aaKnown RBP11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Vps28Q9D1C8 221 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Gpr63Q9EQQ3 425 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Pxmp2P42925 194 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Hnf4aP49698 474 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Smpdl3bP58242 456 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 MylpfP97457 169 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Thrap3Q569Z6 951 aaKnown RBP11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Ca4Q64444 305 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 InavaQ7TN12 663 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Zdhhc15Q8BGJ0 337 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Slc35e2Q8C811 405 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 AcppQ8CE08 381 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 1700020N01RikQ8CF20 87 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Cnot3Q8K0V4 751 aaKnown RBP11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Coq9Q8K1Z0 313 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Olfr1352Q8VGX5 309 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Setd7Q8VHL1 366 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Zfp617Q91WM0 559 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 AasdhpptQ9CQF6 309 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Dcun1d5Q9CXV9 237 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Aldh1b1Q9CZS1 519 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Znf687Q9D2D7 1237 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Epm2aQ9WUA5 330 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Trip11E9Q512 1976 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Gm340F6RGI3 1242 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Sdc4O35988 198 aaKnown RBP11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Tpst2O88856 376 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 CcnfP51944 777 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 RogdiQ3TDK6 287 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Smarcd1Q61466 515 aaKnown RBP11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Ubash3bQ8BGG7 638 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Palm2Q8BR92 376 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Phf11aQ8BVM9 293 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Cfap61Q8CEL2 1252 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 CtbsQ8R242 366 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Sult5a1Q91X36 291 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Cyp4f3Q99N16 524 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Slc24a3Q99PD7 645 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Mcm8Q9CWV1 833 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Cmtm6Q9CZ69 183 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Tsga8Q9JJL0 238 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Il20Q9JKV9 176 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Cylc1A0A1B0GR13 642 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Tbc1d25A1A5B6 742 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Gm10639E9Q6L7 222 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Spdye4cI6XKQ3 339 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Gm6502L7N456 481 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 P01641 117 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Gsta2P10648 222 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Cdh2P15116 906 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 AhcyP50247 432 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Erp29P57759 262 aaKnown RBP11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Slc30a3P97441 388 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Lpcat1Q3TFD2 534 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Mylk4Q5SUV5 386 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Gsdmc3Q8CB12 480 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Fem1cQ8CEF1 617 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 NclnQ8VCM8 563 aaKnown RBP11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 PacrglQ9D3X5 248 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Krt81Q9ERE2 481 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Dpp7Q9ET22 506 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Cdh17Q9R100 827 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Adam23Q9R1V7 829 aa11.22□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Mtcl1Q3UHU5 1945 aa11.21□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Vmn2r35E9Q7U8 861 aa11.21□□□□□ -0.61
Topbp1-201ENSMUST00000035164 AlyrefO08583 255 aaKnown RBP11.21□□□□□ -0.61
Topbp1-201ENSMUST00000035164 H2-Q8P14430 326 aa11.21□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Tuba1cP68373 449 aaKnown RBP11.21□□□□□ -0.61
Topbp1-201ENSMUST00000035164 H2-Q6P79568 326 aa11.21□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Cab39Q06138 341 aa11.21□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Zmym5Q3U2E2 627 aa11.21□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Mef2dQ63943 514 aa11.21□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Vrk2Q8BN21 503 aaKnown RBP11.21□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Wdr47Q8CGF6 920 aa11.21□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Ebf4Q8K4J2 599 aa11.21□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Ca9Q8VHB5 437 aa11.21□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Pcdhb21Q91V48 774 aa11.21□□□□□ -0.61
Topbp1-201ENSMUST00000035164 GrifinQ9D1U0 144 aa11.21□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Isca2Q9DCB8 154 aa11.21□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Tuba8Q9JJZ2 449 aa11.21□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Sirpb1aA0A0A6YYP6 397 aa11.21□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Veph1A1A535 833 aa11.21□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Olfr1153A2AVC0 318 aa11.21□□□□□ -0.61
Topbp1-201ENSMUST00000035164 Vmn2r17E9PYF5 849 aa11.21□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms