RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 ZNHIT2Q9UHR6 403 aa12.82□□□□□ -0.36
PHGDH-218ENST00000641491 DOLKQ9UPQ8 538 aa12.82□□□□□ -0.36
PHGDH-218ENST00000641491 PLAAQ9Y263 795 aa12.82□□□□□ -0.36
PHGDH-218ENST00000641491 GPSM3Q9Y4H4 160 aa12.82□□□□□ -0.36
PHGDH-218ENST00000641491 R4GN57 208 aa12.82□□□□□ -0.36
PHGDH-218ENST00000641491 TLDC2A0PJX2 215 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 FAM159BA6NKW6 160 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 K7ESM1 405 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 DNAJC6O75061 913 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 MTX2O75431 263 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 TNFP01375 233 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 ESR1P03372 595 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 HOXC4P09017 264 aaPredicted RBP12.81□□□□□ -0.36
PHGDH-218ENST00000641491 GM2AP17900 193 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 CHRM3P20309 590 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 PSMA3P25788 255 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 FMO4P31512 558 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 MPP1Q00013 466 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 PPARDQ03181 441 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 TMEM115Q12893 351 aaPredicted RBP12.81□□□□□ -0.36
PHGDH-218ENST00000641491 PDAP1Q13442 181 aaKnown RBP12.81□□□□□ -0.36
PHGDH-218ENST00000641491 DUOXA1Q1HG43 343 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 INSCQ1MX18 579 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 TYSND1Q2T9J0 566 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 KRT71Q3SY84 523 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 TAF1BQ53T94 588 aaPredicted RBP12.81□□□□□ -0.36
PHGDH-218ENST00000641491 TEDDM1Q5T9Z0 273 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 FAM45BPQ6NSW5 357 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 IL27RAQ6UWB1 636 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 PACS1Q6VY07 963 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 RAPH1Q70E73 1250 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 RD3Q7Z3Z2 195 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 GALNT7Q86SF2 657 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 LDB1Q86U70 411 aaPredicted RBP12.81□□□□□ -0.36
PHGDH-218ENST00000641491 LRRTM4Q86VH4 590 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 PARGQ86W56 976 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 DENND6AQ8IWF6 608 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 UNC5BQ8IZJ1 945 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 TMEM145Q8NBT3 493 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 OR13H1Q8NG92 308 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 FAM45AQ8TCE6 357 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 FUBP1Q96AE4 644 aaKnown RBP12.81□□□□□ -0.36
PHGDH-218ENST00000641491 LOXL4Q96JB6 756 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 ZC3H10Q96K80 434 aaKnown RBP12.81□□□□□ -0.36
PHGDH-218ENST00000641491 CNTNAP3BQ96NU0 1288 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 TEX101Q9BY14 249 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 CNTNAP3Q9BZ76 1288 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 CARS2Q9HA77 564 aaKnown RBP12.81□□□□□ -0.36
PHGDH-218ENST00000641491 SARS2Q9NP81 518 aaKnown RBP12.81□□□□□ -0.36
PHGDH-218ENST00000641491 DLL3Q9NYJ7 618 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 SLC24A2Q9UI40 661 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 SMG5Q9UPR3 1016 aaKnown RBP12.81□□□□□ -0.36
PHGDH-218ENST00000641491 CA5BQ9Y2D0 317 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 CRYL1Q9Y2S2 319 aa12.81□□□□□ -0.36
PHGDH-218ENST00000641491 TRBV5-4A0A0C4DH59 114 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 KLHL33A6NCF5 533 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 POM121BA6NF01 834 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 OR2AG2A6NM03 316 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 H0Y8X5 98 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 TLR4O00206 839 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 RASGRF2O14827 1237 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 KPNA5O15131 536 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 KMOO15229 486 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 GPR39O43194 453 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 RASGRP1O95267 797 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 TRIM16O95361 564 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 SYPP08247 313 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 GSTM1P09488 218 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 KRT15P19012 456 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 ARNTP27540 789 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 PBLDP30039 288 aaPredicted RBP12.8□□□□□ -0.36
PHGDH-218ENST00000641491 TRIM23P36406 574 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 GNPDA1P46926 289 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 LEPRP48357 1165 aaKnown RBP12.8□□□□□ -0.36
PHGDH-218ENST00000641491 ARRB1P49407 418 aaPredicted RBP12.8□□□□□ -0.36
PHGDH-218ENST00000641491 GSTM4Q03013 218 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 LAIR1Q6GTX8 287 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 FBXO38Q6PIJ6 1188 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 TMEM220Q6QAJ8 160 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 CRTC3Q6UUV7 619 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 ABI3BPQ7Z7G0 1075 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 HID1Q8IV36 788 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 PIANPQ8IYJ0 282 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 KIAA2013Q8IYS2 634 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 RIBC1Q8N443 379 aaPredicted RBP12.8□□□□□ -0.36
PHGDH-218ENST00000641491 SKA2Q8WVK7 121 aaPredicted RBP12.8□□□□□ -0.36
PHGDH-218ENST00000641491 DNASE2BQ8WZ79 361 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 MTBPQ96DY7 904 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 PKNOX2Q96KN3 472 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 KLF6Q99612 283 aaPredicted RBP12.8□□□□□ -0.36
PHGDH-218ENST00000641491 TXLNGYQ9BZA5 131 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 ROPN1BQ9BZX4 212 aaPredicted RBP12.8□□□□□ -0.36
PHGDH-218ENST00000641491 RHOJQ9H4E5 214 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 ROPN1Q9HAT0 212 aaPredicted RBP12.8□□□□□ -0.36
PHGDH-218ENST00000641491 CYP4F12Q9HCS2 524 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 DNAJC28Q9NX36 388 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 TAS2R13Q9NYV9 303 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 MARCH4Q9P2E8 410 aaPredicted RBP12.8□□□□□ -0.36
PHGDH-218ENST00000641491 NCDNQ9UBB6 729 aa12.8□□□□□ -0.36
PHGDH-218ENST00000641491 FETUBQ9UGM5 382 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms