RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 OR5K1Q8NHB7 308 aa8.21□□□□□ -1.09
NECAP1-227ENST00000640648 TERB2Q8NHR7 220 aa8.21□□□□□ -1.09
NECAP1-227ENST00000640648 ZSCAN18Q8TBC5 510 aaPredicted RBP8.21□□□□□ -1.09
NECAP1-227ENST00000640648 EEF1AKMT1Q8WVE0 214 aa8.21□□□□□ -1.09
NECAP1-227ENST00000640648 SHC3Q92529 594 aa8.21□□□□□ -1.09
NECAP1-227ENST00000640648 FAM163AQ96GL9 167 aaPredicted RBP8.21□□□□□ -1.09
NECAP1-227ENST00000640648 TMEM176AQ96HP8 235 aa8.21□□□□□ -1.09
NECAP1-227ENST00000640648 IDI2Q9BXS1 227 aa8.21□□□□□ -1.09
NECAP1-227ENST00000640648 PRKD2Q9BZL6 878 aa8.21□□□□□ -1.09
NECAP1-227ENST00000640648 ARMC7Q9H6L4 198 aa8.21□□□□□ -1.09
NECAP1-227ENST00000640648 CASS4Q9NQ75 786 aa8.21□□□□□ -1.09
NECAP1-227ENST00000640648 TMEM161AQ9NX61 479 aa8.21□□□□□ -1.09
NECAP1-227ENST00000640648 GFOD1Q9NXC2 390 aa8.21□□□□□ -1.09
NECAP1-227ENST00000640648 WDR27A2RRH5 827 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 WASH4PA8MWX3 477 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 H3BMQ9 156 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 L7N2F9 121 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 JCHAINP01591 159 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 CHRNA1P02708 482 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 CD2P06729 351 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 TPH1P17752 444 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 HOXD13P35453 343 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 VEGFCP49767 419 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 MAMLD1Q13495 774 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 LSM12Q3MHD2 195 aaKnown RBP8.21□□□□□ -1.1
NECAP1-227ENST00000640648 NOMO2Q5JPE7 1267 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 ZNF470Q6ECI4 717 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 NPNTQ6UXI9 565 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 CYP2R1Q6VVX0 501 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 TMEM132CQ8N3T6 1108 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 SLC13A3Q8WWT9 602 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 COG8Q96MW5 612 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 ALPK1Q96QP1 1244 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 SLITRK2Q9H156 845 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 METTL8Q9H825 291 aaKnown RBP8.21□□□□□ -1.1
NECAP1-227ENST00000640648 SMURF2Q9HAU4 748 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 NFKBIL1Q9UBC1 381 aaPredicted RBP8.21□□□□□ -1.1
NECAP1-227ENST00000640648 EIF3KQ9UBQ5 218 aaKnown RBP8.21□□□□□ -1.1
NECAP1-227ENST00000640648 PCDHA11Q9Y5I1 949 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 DLG5Q8TDM6 1919 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 A0A1W2PPM1 405 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 LIASO43766 372 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 PLOD3O60568 738 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 METTL18O95568 372 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 TFAP2AP05549 437 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 RAP2AP10114 183 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 UBL4AP11441 157 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 ATP5F1P24539 256 aaPredicted RBP8.21□□□□□ -1.1
NECAP1-227ENST00000640648 SLC5A2P31639 672 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 PPP3CCP48454 512 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 TAS2R40P59535 323 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 FAM187BQ17R55 369 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 SNX20Q7Z614 316 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 OR4A15Q8NGL6 344 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 TRAPPC12Q8WVT3 735 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 SLC35B4Q969S0 331 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 MARVELD3Q96A59 401 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 TESCQ96BS2 214 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 SIAEQ9HAT2 523 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 TSPAN16Q9UKR8 245 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 ALG5Q9Y673 324 aa8.21□□□□□ -1.1
NECAP1-227ENST00000640648 APOC4-APOC2K7ER74 178 aa8.2□□□□□ -1.1
NECAP1-227ENST00000640648 CDC7O00311 574 aa8.2□□□□□ -1.1
NECAP1-227ENST00000640648 FANCGO15287 622 aa8.2□□□□□ -1.1
NECAP1-227ENST00000640648 GRID2O43424 1007 aa8.2□□□□□ -1.1
NECAP1-227ENST00000640648 PPP1R11O60927 126 aaPredicted RBP8.2□□□□□ -1.1
NECAP1-227ENST00000640648 MAFO75444 373 aaPredicted RBP8.2□□□□□ -1.1
NECAP1-227ENST00000640648 RFPL1O75677 317 aa8.2□□□□□ -1.1
NECAP1-227ENST00000640648 APOC2P02655 101 aa8.2□□□□□ -1.1
NECAP1-227ENST00000640648 CYP3A4P08684 503 aa8.2□□□□□ -1.1
NECAP1-227ENST00000640648 MTHFD1P11586 935 aaKnown RBP8.2□□□□□ -1.1
NECAP1-227ENST00000640648 CRADDP78560 199 aa8.2□□□□□ -1.1
NECAP1-227ENST00000640648 ADAM15Q13444 863 aa8.2□□□□□ -1.1
NECAP1-227ENST00000640648 SGO1Q5FBB7 561 aa8.2□□□□□ -1.1
NECAP1-227ENST00000640648 CXXC5Q7LFL8 322 aaKnown RBP8.2□□□□□ -1.1
NECAP1-227ENST00000640648 SCUBE3Q8IX30 993 aa8.2□□□□□ -1.1
NECAP1-227ENST00000640648 EFCAB3Q8N7B9 438 aa8.2□□□□□ -1.1
NECAP1-227ENST00000640648 TRPV3Q8NET8 790 aa8.2□□□□□ -1.1
NECAP1-227ENST00000640648 SPOCK2Q92563 424 aa8.2□□□□□ -1.1
NECAP1-227ENST00000640648 PCDHB18PQ96TA0 734 aa8.2□□□□□ -1.1
NECAP1-227ENST00000640648 UCKL1Q9NWZ5 548 aa8.2□□□□□ -1.1
NECAP1-227ENST00000640648 KCNIP3Q9Y2W7 256 aa8.2□□□□□ -1.1
NECAP1-227ENST00000640648 NDUFS3O75489 264 aa8.2□□□□□ -1.1
NECAP1-227ENST00000640648 ZMPSTE24O75844 475 aa8.2□□□□□ -1.1
NECAP1-227ENST00000640648 ANXA9O76027 345 aa8.2□□□□□ -1.1
NECAP1-227ENST00000640648 IFNA17P01571 189 aa8.2□□□□□ -1.1
NECAP1-227ENST00000640648 FGRP09769 529 aa8.2□□□□□ -1.1
NECAP1-227ENST00000640648 BMP2P12643 396 aa8.2□□□□□ -1.1
NECAP1-227ENST00000640648 CPB1P15086 417 aa8.2□□□□□ -1.1
NECAP1-227ENST00000640648 CD36P16671 472 aa8.2□□□□□ -1.1
NECAP1-227ENST00000640648 ZNF182P17025 639 aaPredicted RBP8.2□□□□□ -1.1
NECAP1-227ENST00000640648 RPS3P23396 243 aaKnown RBP eCLIP8.2□□□□□ -1.1
NECAP1-227ENST00000640648 MGAT1P26572 445 aa8.2□□□□□ -1.1
NECAP1-227ENST00000640648 ATP4BP51164 291 aa8.2□□□□□ -1.1
NECAP1-227ENST00000640648 SLC3A1Q07837 685 aa8.2□□□□□ -1.1
NECAP1-227ENST00000640648 DPYSL3Q14195 570 aa8.2□□□□□ -1.1
NECAP1-227ENST00000640648 ZDHHC24Q6UX98 284 aa8.2□□□□□ -1.1
NECAP1-227ENST00000640648 FAM35AQ86V20 835 aa8.2□□□□□ -1.1
NECAP1-227ENST00000640648 SLC37A3Q8NCC5 494 aa8.2□□□□□ -1.1
NECAP1-227ENST00000640648 IFT27Q9BW83 186 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms