RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 HJURPQ8NCD3 748 aaPredicted RBP7.34□□□□□ -1.23
NECAP1-220ENST00000639841 OR52K1Q8NGK4 314 aa7.34□□□□□ -1.23
NECAP1-220ENST00000639841 PHOSPHO2Q8TCD6 241 aa7.34□□□□□ -1.23
NECAP1-220ENST00000639841 TRMT61AQ96FX7 289 aaKnown RBP7.34□□□□□ -1.23
NECAP1-220ENST00000639841 LIN37Q96GY3 246 aaPredicted RBP7.34□□□□□ -1.23
NECAP1-220ENST00000639841 NPAS1Q99742 590 aa7.34□□□□□ -1.23
NECAP1-220ENST00000639841 WDR83Q9BRX9 315 aaKnown RBP7.34□□□□□ -1.23
NECAP1-220ENST00000639841 AKTIPQ9H8T0 292 aa7.34□□□□□ -1.23
NECAP1-220ENST00000639841 PSD3Q9NYI0 1048 aa7.34□□□□□ -1.23
NECAP1-220ENST00000639841 ANKMY1Q9P2S6 941 aa7.34□□□□□ -1.23
NECAP1-220ENST00000639841 KLQ9UEF7 1012 aa7.34□□□□□ -1.23
NECAP1-220ENST00000639841 CDC42EP3Q9UKI2 254 aa7.34□□□□□ -1.23
NECAP1-220ENST00000639841 UBE2J1Q9Y385 318 aaPredicted RBP7.34□□□□□ -1.23
NECAP1-220ENST00000639841 MYO5AQ9Y4I1 1855 aaKnown RBP7.34□□□□□ -1.24
NECAP1-220ENST00000639841 FAM229AH3BQW9 127 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 GMFGO60234 142 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 SLITRK3O94933 977 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 BCL10O95999 233 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 CYP3A4P08684 503 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 DBHP09172 617 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 ATXN1LP0C7T5 689 aaKnown RBP7.33□□□□□ -1.24
NECAP1-220ENST00000639841 GNAT2P19087 354 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 MYF6P23409 242 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 GATMP50440 423 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 TIAL1Q01085 375 aaKnown RBP eCLIP7.33□□□□□ -1.24
NECAP1-220ENST00000639841 GRSF1Q12849 480 aaKnown RBP eCLIP7.33□□□□□ -1.24
NECAP1-220ENST00000639841 SLC39A14Q15043 492 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 SLC18A3Q16572 532 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 ZSCAN23Q3MJ62 389 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 MCMDC2Q4G0Z9 681 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 LCE2AQ5TA79 106 aaPredicted RBP7.33□□□□□ -1.24
NECAP1-220ENST00000639841 CXXC5Q7LFL8 322 aaKnown RBP7.33□□□□□ -1.24
NECAP1-220ENST00000639841 NUDT13Q86X67 352 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 FAM20CQ8IXL6 584 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 LPGAT1Q92604 370 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 PEX11GQ96HA9 241 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 CLSTN2Q9H4D0 955 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 FBXO28Q9NVF7 368 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 RBM28Q9NW13 759 aaKnown RBP7.33□□□□□ -1.24
NECAP1-220ENST00000639841 NYAP2Q9P242 653 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 COL11A1P12107 1806 aaPredicted RBP7.33□□□□□ -1.24
NECAP1-220ENST00000639841 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 A0A0G2JNJ9 132 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 A0A1B0GWJ7 208 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 ERLIN1O75477 346 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 CHRM4P08173 479 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 CCDC192P0DO97 292 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 ATF2P15336 505 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 ITIH1P19827 911 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 LRPAP1P30533 357 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 FMO4P31512 558 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 PLCD1P51178 756 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 CLCNKBP51801 687 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 TAS2R50P59544 299 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 KCNA10Q16322 511 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 FBXO43Q4G163 708 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 MDH1BQ5I0G3 518 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 GALNT18Q6P9A2 607 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 AFTPHQ6ULP2 937 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 CLEC2AQ6UVW9 174 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 MTSS1LQ765P7 747 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 OTOP2Q7RTS6 562 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 CENPVQ7Z7K6 275 aaPredicted RBP7.33□□□□□ -1.24
NECAP1-220ENST00000639841 SERPINA12Q8IW75 414 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 DDIASQ8IXT1 998 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 TMEFF1Q8IYR6 380 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 OR2T34Q8NGX1 318 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 KCNJ9Q92806 393 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 IFIH1Q9BYX4 1025 aaKnown RBP7.33□□□□□ -1.24
NECAP1-220ENST00000639841 BCAS3Q9H6U6 928 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 YY1AP1Q9H869 796 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 CNOT10Q9H9A5 744 aaKnown RBP7.33□□□□□ -1.24
NECAP1-220ENST00000639841 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.33□□□□□ -1.24
NECAP1-220ENST00000639841 Q9UFV3 132 aa7.33□□□□□ -1.24
NECAP1-220ENST00000639841 TRMT6Q9UJA5 497 aaKnown RBP7.33□□□□□ -1.24
NECAP1-220ENST00000639841 MYH7P12883 1935 aa7.32□□□□□ -1.24
NECAP1-220ENST00000639841 GREB1LQ9C091 1923 aaPredicted RBP7.32□□□□□ -1.24
NECAP1-220ENST00000639841 RAD50Q92878 1312 aa7.32□□□□□ -1.24
NECAP1-220ENST00000639841 GOLGA6L7A0A1B0GV03 622 aa7.32□□□□□ -1.24
NECAP1-220ENST00000639841 PEX10O60683 326 aa7.32□□□□□ -1.24
NECAP1-220ENST00000639841 TRIM13O60858 407 aa7.32□□□□□ -1.24
NECAP1-220ENST00000639841 PGK1P00558 417 aa7.32□□□□□ -1.24
NECAP1-220ENST00000639841 PLGP00747 810 aaPredicted RBP7.32□□□□□ -1.24
NECAP1-220ENST00000639841 SLC16A2P36021 539 aa7.32□□□□□ -1.24
NECAP1-220ENST00000639841 KIR2DL3P43628 341 aa7.32□□□□□ -1.24
NECAP1-220ENST00000639841 BYSLQ13895 437 aaKnown RBP7.32□□□□□ -1.24
NECAP1-220ENST00000639841 CYP2A13Q16696 494 aa7.32□□□□□ -1.24
NECAP1-220ENST00000639841 ZXDCQ2QGD7 858 aaPredicted RBP7.32□□□□□ -1.24
NECAP1-220ENST00000639841 AP5B1Q2VPB7 878 aa7.32□□□□□ -1.24
NECAP1-220ENST00000639841 CYP27C1Q4G0S4 372 aa7.32□□□□□ -1.24
NECAP1-220ENST00000639841 SFMBT2Q5VUG0 894 aa7.32□□□□□ -1.24
NECAP1-220ENST00000639841 TAOK1Q7L7X3 1001 aa7.32□□□□□ -1.24
NECAP1-220ENST00000639841 ZAR1Q86SH2 424 aa7.32□□□□□ -1.24
NECAP1-220ENST00000639841 VASH2Q86V25 355 aa7.32□□□□□ -1.24
NECAP1-220ENST00000639841 WDR5BQ86VZ2 330 aa7.32□□□□□ -1.24
NECAP1-220ENST00000639841 STPG3Q8N7X2 389 aa7.32□□□□□ -1.24
NECAP1-220ENST00000639841 BEND2Q8NDZ0 799 aa7.32□□□□□ -1.24
NECAP1-220ENST00000639841 DNASE1L2Q92874 299 aa7.32□□□□□ -1.24
NECAP1-220ENST00000639841 MIB2Q96AX9 1013 aa7.32□□□□□ -1.24
NECAP1-220ENST00000639841 HS6ST2Q96MM7 605 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms