RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 MPPE1Q53F39 396 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 DGKKQ5KSL6 1271 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 METTL3Q86U44 580 aaKnown RBP14.29□□□□□ -0.12
SCARB2-216ENST00000639300 OSBPL6Q9BZF3 934 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 POLR3BQ9NW08 1133 aaPredicted RBP14.29□□□□□ -0.12
SCARB2-216ENST00000639300 FKTNO75072 461 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 PPM1AP35813 382 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 GTF2H2Q13888 395 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 DGUOKQ16854 277 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 ARMC4Q5T2S8 1044 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 GTF2H2CQ6P1K8 395 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 PLEKHM3Q6ZWE6 761 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 TMPRSS11BQ86T26 416 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 KRT78Q8N1N4 520 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 CLDN19Q8N6F1 224 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 PHF10Q8WUB8 498 aaKnown RBP14.29□□□□□ -0.12
SCARB2-216ENST00000639300 GIMAP2Q9UG22 337 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 A0A1W2PQ67 120 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 GABRDO14764 452 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 CCL16O15467 120 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 CA12O43570 354 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 PTGER3P43115 390 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 FAM174BQ3ZCQ3 159 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 CHPFQ8IZ52 775 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 DENND1AQ8TEH3 1009 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 PYCR2Q96C36 320 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 FEM1CQ96JP0 617 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 FCRL3Q96P31 734 aaPredicted RBP14.29□□□□□ -0.12
SCARB2-216ENST00000639300 CEP44Q9C0F1 390 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 REXO4Q9GZR2 422 aaKnown RBP14.29□□□□□ -0.12
SCARB2-216ENST00000639300 FAM83DQ9H4H8 585 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 FBRSL1Q9HCM7 1045 aaKnown RBP14.29□□□□□ -0.12
SCARB2-216ENST00000639300 LIN7AO14910 233 aaPredicted RBP14.29□□□□□ -0.12
SCARB2-216ENST00000639300 MED26O95402 600 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 TRBC1P01850 177 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 DBTP11182 482 aaKnown RBP14.29□□□□□ -0.12
SCARB2-216ENST00000639300 HPGDP15428 266 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 IMPDH1P20839 514 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 HOXA11P31270 313 aaPredicted RBP14.29□□□□□ -0.12
SCARB2-216ENST00000639300 TRAF3Q13114 568 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 CYP20A1Q6UW02 462 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 VN1R5Q7Z5H4 357 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 PROSER1Q86XN7 944 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 RAVER1Q8IY67 606 aaKnown RBP14.29□□□□□ -0.12
SCARB2-216ENST00000639300 CANT1Q8WVQ1 401 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 AUTS2Q8WXX7 1259 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 SLC47A1Q96FL8 570 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 PRR11Q96HE9 360 aaPredicted RBP14.29□□□□□ -0.12
SCARB2-216ENST00000639300 AKTIPQ9H8T0 292 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 DNAJC11Q9NVH1 559 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 KLHL3Q9UH77 587 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 IKZF3Q9UKT9 509 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 NUMA1Q14980 2115 aa14.29□□□□□ -0.12
SCARB2-216ENST00000639300 CLDN9O95484 217 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 OGNP20774 298 aaKnown RBP14.28□□□□□ -0.12
SCARB2-216ENST00000639300 CCNHP51946 323 aaPredicted RBP14.28□□□□□ -0.12
SCARB2-216ENST00000639300 DPYSQ14117 519 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 INAQ16352 499 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 TMEM40Q8WWA1 233 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 NUAK2Q9H093 628 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 EPB41L1Q9H4G0 881 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 MYO7AQ13402 2215 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 TAF1P21675 1872 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 C10orf71Q711Q0 1435 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 ELOVL7A1L3X0 281 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 E7ENX8 843 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 CCDC159P0C7I6 412 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 MTHFD1P11586 935 aaKnown RBP14.28□□□□□ -0.12
SCARB2-216ENST00000639300 AOC1P19801 751 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 NOS3P29474 1203 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 HMGCS1Q01581 520 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 CHIT1Q13231 466 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 SPANXN2Q5MJ10 180 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 KRT73Q86Y46 540 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 IFNL1Q8IU54 200 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 BTBD9Q96Q07 612 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 EPB41L4BQ9H329 900 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 SGK2Q9HBY8 427 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 VPS51Q9UID3 782 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 FBXO10Q9UK96 956 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 CNOT6Q9ULM6 557 aaKnown RBP14.28□□□□□ -0.12
SCARB2-216ENST00000639300 ENTPD4Q9Y227 616 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 ITM2BQ9Y287 266 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 SH3GLB1Q9Y371 365 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 H3BM21 787 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 AGRPO00253 132 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 CDC7O00311 574 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 ALPIP09923 528 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 FGF3P11487 239 aaPredicted RBP14.28□□□□□ -0.12
SCARB2-216ENST00000639300 COL6A1P12109 1028 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 GJA1P17302 382 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 PPP1R8Q12972 351 aaKnown RBP14.28□□□□□ -0.12
SCARB2-216ENST00000639300 ADGRE1Q14246 886 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 GPRIN1Q7Z2K8 1008 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 ZNF570Q96NI8 536 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 TUBGCP5Q96RT8 1024 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 RAD21L1Q9H4I0 556 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 HMG20AQ9NP66 347 aa14.28□□□□□ -0.12
SCARB2-216ENST00000639300 LTBP3Q9NS15 1303 aa14.27□□□□□ -0.12
SCARB2-216ENST00000639300 SUV39H1O43463 412 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms