RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 IFNGP01579 166 aa18.35■□□□□ 0.53
SCARB2-213ENST00000638680 FGBP02675 491 aa18.35■□□□□ 0.53
SCARB2-213ENST00000638680 CDH5P33151 784 aaPredicted RBP18.35■□□□□ 0.53
SCARB2-213ENST00000638680 UGT1A5P35504 534 aa18.35■□□□□ 0.53
SCARB2-213ENST00000638680 GTF2H2Q13888 395 aa18.35■□□□□ 0.53
SCARB2-213ENST00000638680 GTF2H2CQ6P1K8 395 aa18.35■□□□□ 0.53
SCARB2-213ENST00000638680 TMPRSS11BQ86T26 416 aa18.35■□□□□ 0.53
SCARB2-213ENST00000638680 FSTL5Q8N475 847 aaPredicted RBP18.35■□□□□ 0.53
SCARB2-213ENST00000638680 LIX1Q8N485 282 aa18.35■□□□□ 0.53
SCARB2-213ENST00000638680 TTC29Q8NA56 475 aaPredicted RBP18.35■□□□□ 0.53
SCARB2-213ENST00000638680 DSN1Q9H410 356 aa18.35■□□□□ 0.53
SCARB2-213ENST00000638680 EXD2Q9NVH0 621 aa18.35■□□□□ 0.53
SCARB2-213ENST00000638680 AKAP7Q9P0M2 348 aaPredicted RBP18.35■□□□□ 0.53
SCARB2-213ENST00000638680 GIT1Q9Y2X7 761 aa18.35■□□□□ 0.53
SCARB2-213ENST00000638680 GLYATL1P3A0A0U1RQE8 302 aa18.34■□□□□ 0.53
SCARB2-213ENST00000638680 SLC25A12O75746 678 aa18.34■□□□□ 0.53
SCARB2-213ENST00000638680 MXD1Q05195 221 aa18.34■□□□□ 0.53
SCARB2-213ENST00000638680 ESRP1Q6NXG1 681 aaKnown RBP18.34■□□□□ 0.53
SCARB2-213ENST00000638680 GALNT15Q8N3T1 639 aa18.34■□□□□ 0.53
SCARB2-213ENST00000638680 KCTD5Q9NXV2 234 aa18.34■□□□□ 0.53
SCARB2-213ENST00000638680 ISM1B1AKI9 464 aa18.34■□□□□ 0.53
SCARB2-213ENST00000638680 DNAJA2O60884 412 aa18.34■□□□□ 0.53
SCARB2-213ENST00000638680 CCNCP24863 283 aa18.34■□□□□ 0.53
SCARB2-213ENST00000638680 CD52P31358 61 aa18.34■□□□□ 0.53
SCARB2-213ENST00000638680 HSPA7P48741 367 aa18.34■□□□□ 0.53
SCARB2-213ENST00000638680 MBTD1Q05BQ5 628 aa18.34■□□□□ 0.53
SCARB2-213ENST00000638680 SCN1BQ07699 218 aa18.34■□□□□ 0.53
SCARB2-213ENST00000638680 TOP1MTQ969P6 601 aa18.34■□□□□ 0.53
SCARB2-213ENST00000638680 GPN1Q9HCN4 374 aaPredicted RBP18.34■□□□□ 0.53
SCARB2-213ENST00000638680 PFDN2Q9UHV9 154 aa18.34■□□□□ 0.53
SCARB2-213ENST00000638680 PPIEQ9UNP9 301 aaKnown RBP18.34■□□□□ 0.53
SCARB2-213ENST00000638680 PRKAB1Q9Y478 270 aa18.34■□□□□ 0.53
SCARB2-213ENST00000638680 AREL1O15033 823 aa18.34■□□□□ 0.53
SCARB2-213ENST00000638680 NPHS1O60500 1241 aa18.34■□□□□ 0.53
SCARB2-213ENST00000638680 NOS1APO75052 506 aaPredicted RBP18.34■□□□□ 0.53
SCARB2-213ENST00000638680 PGRP06401 933 aa18.34■□□□□ 0.53
SCARB2-213ENST00000638680 FESP07332 822 aa18.34■□□□□ 0.53
SCARB2-213ENST00000638680 CCNFP41002 786 aa18.34■□□□□ 0.53
SCARB2-213ENST00000638680 CORO1BQ9BR76 489 aa18.34■□□□□ 0.53
SCARB2-213ENST00000638680 EQTNQ9NQ60 294 aa18.34■□□□□ 0.53
SCARB2-213ENST00000638680 PEX16Q9Y5Y5 336 aa18.34■□□□□ 0.53
SCARB2-213ENST00000638680 FAUP35544 74 aaKnown RBP18.34■□□□□ 0.53
SCARB2-213ENST00000638680 WDR4P57081 412 aaKnown RBP18.34■□□□□ 0.53
SCARB2-213ENST00000638680 TOMM20Q15388 145 aa18.34■□□□□ 0.53
SCARB2-213ENST00000638680 PARP15Q460N3 678 aa18.34■□□□□ 0.53
SCARB2-213ENST00000638680 RERGQ96A58 199 aaPredicted RBP18.34■□□□□ 0.53
SCARB2-213ENST00000638680 TUBGCP5Q96RT8 1024 aa18.34■□□□□ 0.53
SCARB2-213ENST00000638680 SIX2Q9NPC8 291 aa18.34■□□□□ 0.53
SCARB2-213ENST00000638680 SOHLH2Q9NX45 425 aa18.34■□□□□ 0.53
SCARB2-213ENST00000638680 YAP1P46937 504 aaKnown RBP18.34■□□□□ 0.53
SCARB2-213ENST00000638680 CAPN13Q6MZZ7 669 aaPredicted RBP18.34■□□□□ 0.53
SCARB2-213ENST00000638680 FRMD7Q6ZUT3 714 aa18.34■□□□□ 0.53
SCARB2-213ENST00000638680 CHSY3Q70JA7 882 aa18.34■□□□□ 0.53
SCARB2-213ENST00000638680 STYXQ8WUJ0 223 aa18.34■□□□□ 0.53
SCARB2-213ENST00000638680 MED28Q9H204 178 aa18.34■□□□□ 0.53
SCARB2-213ENST00000638680 TMEM39AQ9NV64 488 aa18.34■□□□□ 0.53
SCARB2-213ENST00000638680 URADA6NGE7 173 aa18.33■□□□□ 0.53
SCARB2-213ENST00000638680 ITGA3P26006 1051 aa18.33■□□□□ 0.53
SCARB2-213ENST00000638680 TRMT10BQ6PF06 316 aaKnown RBP18.33■□□□□ 0.53
SCARB2-213ENST00000638680 DRICH1Q6PGQ1 229 aaPredicted RBP18.33■□□□□ 0.53
SCARB2-213ENST00000638680 OAFQ86UD1 273 aa18.33■□□□□ 0.53
SCARB2-213ENST00000638680 OR8H1Q8NGG4 311 aa18.33■□□□□ 0.53
SCARB2-213ENST00000638680 ART5Q96L15 291 aa18.33■□□□□ 0.53
SCARB2-213ENST00000638680 RAI2Q9Y5P3 530 aa18.33■□□□□ 0.53
SCARB2-213ENST00000638680 GTPBP1O00178 669 aaKnown RBP18.33■□□□□ 0.53
SCARB2-213ENST00000638680 MTRF1O75570 445 aaKnown RBP18.33■□□□□ 0.53
SCARB2-213ENST00000638680 STK16O75716 305 aa18.33■□□□□ 0.53
SCARB2-213ENST00000638680 OR4F21O95013 312 aa18.33■□□□□ 0.53
SCARB2-213ENST00000638680 CTSEP14091 401 aa18.33■□□□□ 0.53
SCARB2-213ENST00000638680 GJA8P48165 433 aa18.33■□□□□ 0.53
SCARB2-213ENST00000638680 TARBP2Q15633 366 aaKnown RBP18.33■□□□□ 0.53
SCARB2-213ENST00000638680 MAP1SQ66K74 1059 aaPredicted RBP18.33■□□□□ 0.53
SCARB2-213ENST00000638680 TFAP2BQ92481 460 aa18.33■□□□□ 0.53
SCARB2-213ENST00000638680 BTN2A3PQ96KV6 586 aa18.33■□□□□ 0.53
SCARB2-213ENST00000638680 HBEGFQ99075 208 aa18.33■□□□□ 0.53
SCARB2-213ENST00000638680 C3orf14Q9HBI5 128 aa18.33■□□□□ 0.53
SCARB2-213ENST00000638680 NKX1-2Q9UD57 310 aaPredicted RBP18.33■□□□□ 0.53
SCARB2-213ENST00000638680 KIDINS220Q9ULH0 1771 aa18.33■□□□□ 0.53
SCARB2-213ENST00000638680 DISP2A7MBM2 1401 aa18.33■□□□□ 0.53
SCARB2-213ENST00000638680 FAM172BPA6NC97 362 aa18.33■□□□□ 0.52
SCARB2-213ENST00000638680 FAM86C2PA6NEL3 165 aa18.33■□□□□ 0.52
SCARB2-213ENST00000638680 SLC35G4P0C7Q5 338 aa18.33■□□□□ 0.52
SCARB2-213ENST00000638680 ACTR3P61158 418 aa18.33■□□□□ 0.52
SCARB2-213ENST00000638680 PPP2R2BQ00005 443 aa18.33■□□□□ 0.52
SCARB2-213ENST00000638680 ANKRD46Q86W74 232 aa18.33■□□□□ 0.52
SCARB2-213ENST00000638680 ZZZ3Q8IYH5 903 aa18.33■□□□□ 0.52
SCARB2-213ENST00000638680 DAW1Q8N136 415 aa18.33■□□□□ 0.52
SCARB2-213ENST00000638680 CLIP4Q8N3C7 705 aa18.33■□□□□ 0.52
SCARB2-213ENST00000638680 COPS4Q9BT78 406 aa18.33■□□□□ 0.52
SCARB2-213ENST00000638680 ZNF224Q9NZL3 707 aa18.33■□□□□ 0.52
SCARB2-213ENST00000638680 ZNF536O15090 1300 aa18.33■□□□□ 0.52
SCARB2-213ENST00000638680 COL5A2P05997 1499 aaPredicted RBP18.33■□□□□ 0.52
SCARB2-213ENST00000638680 IL1BP01584 269 aa18.33■□□□□ 0.52
SCARB2-213ENST00000638680 FECHP22830 423 aa18.33■□□□□ 0.52
SCARB2-213ENST00000638680 SUZ12Q15022 739 aaKnown RBP18.33■□□□□ 0.52
SCARB2-213ENST00000638680 PPP1R14BQ96C90 147 aa18.33■□□□□ 0.52
SCARB2-213ENST00000638680 TNKS2Q9H2K2 1166 aa18.33■□□□□ 0.52
SCARB2-213ENST00000638680 ZNF99A8MXY4 864 aaPredicted RBP18.33■□□□□ 0.52
SCARB2-213ENST00000638680 CXCR6O00574 342 aa18.33■□□□□ 0.52
SCARB2-213ENST00000638680 SLC30A4O14863 429 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms