RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 FADS3Q9Y5Q0 445 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 FAM72CH0Y354 149 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 SLC6A2P23975 617 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 HCAR3P49019 387 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 GTF2H2Q13888 395 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 INAQ16352 499 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 RBM20Q5T481 1227 aaKnown RBP14.23□□□□□ -0.13
SCARB2-208ENST00000638372 FAM72AQ5TYM5 149 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 FAM72DQ6L9T8 149 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 GTF2H2CQ6P1K8 395 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 B3GNT6Q6ZMB0 384 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 RBM44Q6ZP01 1051 aaKnown RBP14.23□□□□□ -0.13
SCARB2-208ENST00000638372 ZC3HC1Q86WB0 502 aaKnown RBP14.23□□□□□ -0.13
SCARB2-208ENST00000638372 FAM72BQ86X60 149 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 UBR7Q8N806 425 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 ZNF540Q8NDQ6 660 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 OR2T34Q8NGX1 318 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 OR2T3Q8NH03 318 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 RNFT2Q96EX2 444 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 OR52B2Q96RD2 323 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 OXCT2Q9BYC2 517 aaPredicted RBP14.23□□□□□ -0.13
SCARB2-208ENST00000638372 KLHL25Q9H0H3 589 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 UNC93B1Q9H1C4 597 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 KLHL3Q9UH77 587 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 MAPRE3Q9UPY8 281 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 A0A088AWK7 358 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 ALPIP09923 528 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 UROSP10746 265 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 ZNF10P21506 573 aaPredicted RBP14.23□□□□□ -0.13
SCARB2-208ENST00000638372 HTR1BP28222 390 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 SSR2P43308 183 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 CYP4F3Q08477 520 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 GPAT3Q53EU6 434 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 SWT1Q5T5J6 900 aaKnown RBP14.23□□□□□ -0.13
SCARB2-208ENST00000638372 ZNF280BQ86YH2 543 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 TBC1D21Q8IYX1 336 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 HERPUD2Q9BSE4 406 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 PNPLA3Q9NST1 481 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 MIOSQ9NXC5 875 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 MAGEL2Q9UJ55 1249 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 YIPF1Q9Y548 306 aa14.23□□□□□ -0.13
SCARB2-208ENST00000638372 MYL12BO14950 172 aa14.22□□□□□ -0.13
SCARB2-208ENST00000638372 SCAMP1O15126 338 aa14.22□□□□□ -0.13
SCARB2-208ENST00000638372 FFAR2O15552 330 aa14.22□□□□□ -0.13
SCARB2-208ENST00000638372 TLX1P31314 330 aaPredicted RBP14.22□□□□□ -0.13
SCARB2-208ENST00000638372 PAFAH1B3Q15102 231 aaKnown RBP14.22□□□□□ -0.13
SCARB2-208ENST00000638372 SIRPB2Q5JXA9 342 aa14.22□□□□□ -0.13
SCARB2-208ENST00000638372 REP15Q6BDI9 236 aa14.22□□□□□ -0.13
SCARB2-208ENST00000638372 EIF3MQ7L2H7 374 aaKnown RBP14.22□□□□□ -0.13
SCARB2-208ENST00000638372 PIM3Q86V86 326 aa14.22□□□□□ -0.13
SCARB2-208ENST00000638372 SLC7A8Q9UHI5 535 aa14.22□□□□□ -0.13
SCARB2-208ENST00000638372 CNOT6Q9ULM6 557 aaKnown RBP14.22□□□□□ -0.13
SCARB2-208ENST00000638372 VPS4AQ9UN37 437 aa14.22□□□□□ -0.13
SCARB2-208ENST00000638372 GABRQQ9UN88 632 aa14.22□□□□□ -0.13
SCARB2-208ENST00000638372 ZBTB11O95625 1053 aaPredicted RBP14.22□□□□□ -0.13
SCARB2-208ENST00000638372 OGNP20774 298 aaKnown RBP14.22□□□□□ -0.13
SCARB2-208ENST00000638372 MANFP55145 182 aaKnown RBP14.22□□□□□ -0.13
SCARB2-208ENST00000638372 TAF1AQ15573 450 aaPredicted RBP14.22□□□□□ -0.13
SCARB2-208ENST00000638372 C6orf52Q5T4I8 152 aa14.22□□□□□ -0.13
SCARB2-208ENST00000638372 TRIM40Q6P9F5 258 aa14.22□□□□□ -0.13
SCARB2-208ENST00000638372 PSRC1Q6PGN9 363 aaPredicted RBP14.22□□□□□ -0.13
SCARB2-208ENST00000638372 ADCY4Q8NFM4 1077 aa14.22□□□□□ -0.13
SCARB2-208ENST00000638372 PYCR2Q96C36 320 aa14.22□□□□□ -0.13
SCARB2-208ENST00000638372 SPACA7Q96KW9 195 aa14.22□□□□□ -0.13
SCARB2-208ENST00000638372 TMEM209Q96SK2 561 aa14.22□□□□□ -0.13
SCARB2-208ENST00000638372 SLC28A3Q9HAS3 691 aa14.22□□□□□ -0.13
SCARB2-208ENST00000638372 AASDHPPTQ9NRN7 309 aa14.22□□□□□ -0.13
SCARB2-208ENST00000638372 OXSMQ9NWU1 459 aa14.22□□□□□ -0.13
SCARB2-208ENST00000638372 IKZF3Q9UKT9 509 aa14.22□□□□□ -0.13
SCARB2-208ENST00000638372 NUP98P52948 1817 aa14.22□□□□□ -0.13
SCARB2-208ENST00000638372 GSAPA4D1B5 854 aa14.22□□□□□ -0.13
SCARB2-208ENST00000638372 MEIS3P2A8K0S8 358 aa14.22□□□□□ -0.13
SCARB2-208ENST00000638372 GABRDO14764 452 aa14.22□□□□□ -0.13
SCARB2-208ENST00000638372 SUV39H1O43463 412 aa14.22□□□□□ -0.13
SCARB2-208ENST00000638372 RNASEH2AO75792 299 aaKnown RBP14.22□□□□□ -0.13
SCARB2-208ENST00000638372 NCK1P16333 377 aa14.22□□□□□ -0.13
SCARB2-208ENST00000638372 BROXQ5VW32 411 aa14.22□□□□□ -0.13
SCARB2-208ENST00000638372 GPR107Q5VW38 600 aa14.22□□□□□ -0.13
SCARB2-208ENST00000638372 CAND1Q86VP6 1230 aaKnown RBP14.22□□□□□ -0.13
SCARB2-208ENST00000638372 CDK15Q96Q40 435 aa14.22□□□□□ -0.13
SCARB2-208ENST00000638372 PAAF1Q9BRP4 392 aa14.22□□□□□ -0.13
SCARB2-208ENST00000638372 SMOC2Q9H3U7 446 aa14.22□□□□□ -0.13
SCARB2-208ENST00000638372 NUDT4Q9NZJ9 180 aa14.22□□□□□ -0.13
SCARB2-208ENST00000638372 CORO1CQ9ULV4 474 aaPredicted RBP14.22□□□□□ -0.13
SCARB2-208ENST00000638372 ANGPT4Q9Y264 503 aa14.22□□□□□ -0.13
SCARB2-208ENST00000638372 ANKRD12Q6UB98 2062 aa14.22□□□□□ -0.13
SCARB2-208ENST00000638372 NPHS1O60500 1241 aa14.22□□□□□ -0.13
SCARB2-208ENST00000638372 GALNT2Q10471 571 aa14.22□□□□□ -0.13
SCARB2-208ENST00000638372 EIF2B5Q13144 721 aaKnown RBP14.22□□□□□ -0.13
SCARB2-208ENST00000638372 CLDN19Q8N6F1 224 aa14.22□□□□□ -0.13
SCARB2-208ENST00000638372 MIR1-1HGQ9H1L0 117 aa14.22□□□□□ -0.13
SCARB2-208ENST00000638372 ALG2Q9H553 416 aa14.22□□□□□ -0.13
SCARB2-208ENST00000638372 OR10H3O60404 316 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 DLX3O60479 287 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 PSMD8P48556 350 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 SLC11A1P49279 550 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 PTPRCAPQ14761 206 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 CBX2Q14781 532 aaPredicted RBP14.21□□□□□ -0.13
SCARB2-208ENST00000638372 HLA-DQA1Q5Y7H0 255 aa14.21□□□□□ -0.13
SCARB2-208ENST00000638372 C16orf62Q7Z3J2 963 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms