RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 MAGEL2Q9UJ55 1249 aa19.94■□□□□ 0.78
SYNGAP1-227ENST00000638142 TDRKHQ9Y2W6 561 aaKnown RBP19.94■□□□□ 0.78
SYNGAP1-227ENST00000638142 NPEPPSL1A6NEC2 478 aa19.93■□□□□ 0.78
SYNGAP1-227ENST00000638142 NDUFS3O75489 264 aa19.93■□□□□ 0.78
SYNGAP1-227ENST00000638142 CASP2P42575 452 aa19.93■□□□□ 0.78
SYNGAP1-227ENST00000638142 NFE2Q16621 373 aaPredicted RBP19.93■□□□□ 0.78
SYNGAP1-227ENST00000638142 FBXO48Q5FWF7 155 aa19.93■□□□□ 0.78
SYNGAP1-227ENST00000638142 SPRYD7Q5W111 196 aa19.93■□□□□ 0.78
SYNGAP1-227ENST00000638142 HID1Q8IV36 788 aa19.93■□□□□ 0.78
SYNGAP1-227ENST00000638142 DPP10Q8N608 796 aa19.93■□□□□ 0.78
SYNGAP1-227ENST00000638142 ZBTB8BQ8NAP8 495 aaPredicted RBP19.93■□□□□ 0.78
SYNGAP1-227ENST00000638142 RPL10LQ96L21 214 aaKnown RBP19.93■□□□□ 0.78
SYNGAP1-227ENST00000638142 GPR21Q99679 349 aa19.93■□□□□ 0.78
SYNGAP1-227ENST00000638142 INTS7Q9NVH2 962 aaKnown RBP19.93■□□□□ 0.78
SYNGAP1-227ENST00000638142 SLAMF8Q9P0V8 285 aa19.93■□□□□ 0.78
SYNGAP1-227ENST00000638142 BTN3A1O00481 513 aa19.93■□□□□ 0.78
SYNGAP1-227ENST00000638142 ALBP02768 609 aa19.93■□□□□ 0.78
SYNGAP1-227ENST00000638142 CDH1P12830 882 aa19.93■□□□□ 0.78
SYNGAP1-227ENST00000638142 AKR1A1P14550 325 aa19.93■□□□□ 0.78
SYNGAP1-227ENST00000638142 GPR15P49685 360 aa19.93■□□□□ 0.78
SYNGAP1-227ENST00000638142 GRSF1Q12849 480 aaKnown RBP eCLIP19.93■□□□□ 0.78
SYNGAP1-227ENST00000638142 CRY1Q16526 586 aa19.93■□□□□ 0.78
SYNGAP1-227ENST00000638142 RBBP7Q16576 425 aa19.93■□□□□ 0.78
SYNGAP1-227ENST00000638142 OR2T11Q8NH01 316 aa19.93■□□□□ 0.78
SYNGAP1-227ENST00000638142 ISG20Q96AZ6 181 aaKnown RBP19.93■□□□□ 0.78
SYNGAP1-227ENST00000638142 NSMCE2Q96MF7 247 aa19.93■□□□□ 0.78
SYNGAP1-227ENST00000638142 SEPHS2Q99611 448 aa19.93■□□□□ 0.78
SYNGAP1-227ENST00000638142 PDFQ9HBH1 243 aa19.93■□□□□ 0.78
SYNGAP1-227ENST00000638142 ZFYVE28Q9HCC9 887 aa19.93■□□□□ 0.78
SYNGAP1-227ENST00000638142 OLA1Q9NTK5 396 aaKnown RBP19.93■□□□□ 0.78
SYNGAP1-227ENST00000638142 PCDHB3Q9Y5E6 796 aa19.93■□□□□ 0.78
SYNGAP1-227ENST00000638142 SCN10AQ9Y5Y9 1956 aa19.92■□□□□ 0.78
SYNGAP1-227ENST00000638142 GBF1Q92538 1859 aa19.92■□□□□ 0.78
SYNGAP1-227ENST00000638142 TULP3O75386 442 aa19.92■□□□□ 0.78
SYNGAP1-227ENST00000638142 CPNE6O95741 557 aa19.92■□□□□ 0.78
SYNGAP1-227ENST00000638142 AGTR2P50052 363 aa19.92■□□□□ 0.78
SYNGAP1-227ENST00000638142 PRKG2Q13237 762 aa19.92■□□□□ 0.78
SYNGAP1-227ENST00000638142 GNASQ5JWF2 1037 aa19.92■□□□□ 0.78
SYNGAP1-227ENST00000638142 TMEM26Q6ZUK4 368 aa19.92■□□□□ 0.78
SYNGAP1-227ENST00000638142 GPRIN3Q6ZVF9 776 aa19.92■□□□□ 0.78
SYNGAP1-227ENST00000638142 ZFAND4Q86XD8 727 aa19.92■□□□□ 0.78
SYNGAP1-227ENST00000638142 MIB1Q86YT6 1006 aa19.92■□□□□ 0.78
SYNGAP1-227ENST00000638142 RNF145Q96MT1 663 aa19.92■□□□□ 0.78
SYNGAP1-227ENST00000638142 ADAM2Q99965 735 aa19.92■□□□□ 0.78
SYNGAP1-227ENST00000638142 C1orf50Q9BV19 199 aa19.92■□□□□ 0.78
SYNGAP1-227ENST00000638142 IFT80Q9P2H3 777 aaPredicted RBP19.92■□□□□ 0.78
SYNGAP1-227ENST00000638142 VPS9D1Q9Y2B5 631 aa19.92■□□□□ 0.78
SYNGAP1-227ENST00000638142 NOL3O60936 208 aaKnown RBP19.92■□□□□ 0.78
SYNGAP1-227ENST00000638142 DUSP11O75319 330 aaKnown RBP19.92■□□□□ 0.78
SYNGAP1-227ENST00000638142 OAZ2O95190 189 aa19.92■□□□□ 0.78
SYNGAP1-227ENST00000638142 TBX18O95935 607 aa19.92■□□□□ 0.78
SYNGAP1-227ENST00000638142 IL12AP29459 219 aa19.92■□□□□ 0.78
SYNGAP1-227ENST00000638142 AARS2Q5JTZ9 985 aaKnown RBP19.92■□□□□ 0.78
SYNGAP1-227ENST00000638142 C6orf136Q5SQH8 315 aa19.92■□□□□ 0.78
SYNGAP1-227ENST00000638142 UGT3A1Q6NUS8 523 aa19.92■□□□□ 0.78
SYNGAP1-227ENST00000638142 CXCL17Q6UXB2 119 aa19.92■□□□□ 0.78
SYNGAP1-227ENST00000638142 RIMKLAQ8IXN7 391 aa19.92■□□□□ 0.78
SYNGAP1-227ENST00000638142 PROKR1Q8TCW9 393 aa19.92■□□□□ 0.78
SYNGAP1-227ENST00000638142 COX4I2Q96KJ9 171 aa19.92■□□□□ 0.78
SYNGAP1-227ENST00000638142 IL37Q9NZH6 218 aa19.92■□□□□ 0.78
SYNGAP1-227ENST00000638142 MARCH2Q9P0N8 246 aa19.92■□□□□ 0.78
SYNGAP1-227ENST00000638142 A0A1W2PPW3 197 aa19.91■□□□□ 0.78
SYNGAP1-227ENST00000638142 NCF1BA6NI72 391 aaPredicted RBP19.91■□□□□ 0.78
SYNGAP1-227ENST00000638142 NCF1CA8MVU1 366 aaPredicted RBP19.91■□□□□ 0.78
SYNGAP1-227ENST00000638142 MT-ND1P03886 318 aa19.91■□□□□ 0.78
SYNGAP1-227ENST00000638142 NCF1P14598 390 aaPredicted RBP19.91■□□□□ 0.78
SYNGAP1-227ENST00000638142 ANKDD1AQ495B1 522 aa19.91■□□□□ 0.78
SYNGAP1-227ENST00000638142 SLC44A4Q53GD3 710 aa19.91■□□□□ 0.78
SYNGAP1-227ENST00000638142 GLYATQ6IB77 296 aa19.91■□□□□ 0.78
SYNGAP1-227ENST00000638142 ZNF773Q6PK81 442 aa19.91■□□□□ 0.78
SYNGAP1-227ENST00000638142 FNDC5Q8NAU1 212 aa19.91■□□□□ 0.78
SYNGAP1-227ENST00000638142 TBC1D15Q8TC07 691 aa19.91■□□□□ 0.78
SYNGAP1-227ENST00000638142 ACOX2Q99424 681 aa19.91■□□□□ 0.78
SYNGAP1-227ENST00000638142 MGME1Q9BQP7 344 aa19.91■□□□□ 0.78
SYNGAP1-227ENST00000638142 SOX17Q9H6I2 414 aaPredicted RBP19.91■□□□□ 0.78
SYNGAP1-227ENST00000638142 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.91■□□□□ 0.78
SYNGAP1-227ENST00000638142 SYNCRIPO60506 623 aaKnown RBP19.91■□□□□ 0.78
SYNGAP1-227ENST00000638142 DEAF1O75398 565 aaPredicted RBP19.91■□□□□ 0.78
SYNGAP1-227ENST00000638142 VPS26AO75436 327 aa19.91■□□□□ 0.78
SYNGAP1-227ENST00000638142 IGLV3-27P01718 113 aa19.91■□□□□ 0.78
SYNGAP1-227ENST00000638142 INHBBP09529 407 aa19.91■□□□□ 0.78
SYNGAP1-227ENST00000638142 ZNF12P17014 697 aa19.91■□□□□ 0.78
SYNGAP1-227ENST00000638142 CES1P23141 567 aa19.91■□□□□ 0.78
SYNGAP1-227ENST00000638142 SOX11P35716 441 aa19.91■□□□□ 0.78
SYNGAP1-227ENST00000638142 OR4D2P58180 307 aa19.91■□□□□ 0.78
SYNGAP1-227ENST00000638142 CBX3Q13185 183 aa19.91■□□□□ 0.78
SYNGAP1-227ENST00000638142 SPIDRQ14159 915 aa19.91■□□□□ 0.78
SYNGAP1-227ENST00000638142 PLCL1Q15111 1095 aa19.91■□□□□ 0.78
SYNGAP1-227ENST00000638142 PTPRNQ16849 979 aa19.91■□□□□ 0.78
SYNGAP1-227ENST00000638142 ATP6AP1LQ52LC2 224 aa19.91■□□□□ 0.78
SYNGAP1-227ENST00000638142 PYCR3Q53H96 274 aa19.91■□□□□ 0.78
SYNGAP1-227ENST00000638142 FAM117BQ6P1L5 589 aa19.91■□□□□ 0.78
SYNGAP1-227ENST00000638142 SCIMPQ6UWF3 145 aa19.91■□□□□ 0.78
SYNGAP1-227ENST00000638142 OR4K2Q8NGD2 314 aa19.91■□□□□ 0.78
SYNGAP1-227ENST00000638142 ZNF382Q96SR6 550 aa19.91■□□□□ 0.78
SYNGAP1-227ENST00000638142 USP22Q9UPT9 525 aa19.91■□□□□ 0.78
SYNGAP1-227ENST00000638142 SPO11Q9Y5K1 396 aa19.91■□□□□ 0.78
SYNGAP1-227ENST00000638142 FAM92AA1XBS5 289 aa19.9■□□□□ 0.78
SYNGAP1-227ENST00000638142 ENPP3O14638 875 aa19.9■□□□□ 0.78
SYNGAP1-227ENST00000638142 PRSS23O95084 383 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms