RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 OR2I1PQ8NGU4 316 aa15.81■□□□□ 0.12
CLN6-216ENST00000636876 GSDMBQ8TAX9 411 aa15.81■□□□□ 0.12
CLN6-216ENST00000636876 HEXDCQ8WVB3 486 aa15.81■□□□□ 0.12
CLN6-216ENST00000636876 CCDC97Q96F63 343 aaPredicted RBP15.81■□□□□ 0.12
CLN6-216ENST00000636876 CERS2Q96G23 380 aa15.81■□□□□ 0.12
CLN6-216ENST00000636876 DCUN1D1Q96GG9 259 aa15.81■□□□□ 0.12
CLN6-216ENST00000636876 TTC25Q96NG3 672 aa15.81■□□□□ 0.12
CLN6-216ENST00000636876 FAM167BQ9BTA0 163 aa15.81■□□□□ 0.12
CLN6-216ENST00000636876 EDEM2Q9BV94 578 aa15.81■□□□□ 0.12
CLN6-216ENST00000636876 TCEAL2Q9H3H9 227 aaPredicted RBP15.81■□□□□ 0.12
CLN6-216ENST00000636876 CAAP1Q9H8G2 361 aa15.81■□□□□ 0.12
CLN6-216ENST00000636876 RMI1Q9H9A7 625 aa15.81■□□□□ 0.12
CLN6-216ENST00000636876 CARS2Q9HA77 564 aaKnown RBP15.81■□□□□ 0.12
CLN6-216ENST00000636876 IL21RQ9HBE5 538 aa15.81■□□□□ 0.12
CLN6-216ENST00000636876 SUFUQ9UMX1 484 aa15.81■□□□□ 0.12
CLN6-216ENST00000636876 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.81■□□□□ 0.12
CLN6-216ENST00000636876 TDRD6O60522 2096 aaKnown RBP15.8■□□□□ 0.12
CLN6-216ENST00000636876 CFAP99D6REC4 459 aa15.8■□□□□ 0.12
CLN6-216ENST00000636876 H3BM21 787 aa15.8■□□□□ 0.12
CLN6-216ENST00000636876 CHUKO15111 745 aa15.8■□□□□ 0.12
CLN6-216ENST00000636876 YKT6O15498 198 aa15.8■□□□□ 0.12
CLN6-216ENST00000636876 DNAJC6O75061 913 aa15.8■□□□□ 0.12
CLN6-216ENST00000636876 TNFP01375 233 aa15.8■□□□□ 0.12
CLN6-216ENST00000636876 GSTA2P09210 222 aa15.8■□□□□ 0.12
CLN6-216ENST00000636876 MYBL2P10244 700 aa15.8■□□□□ 0.12
CLN6-216ENST00000636876 ERVK-10P10266 1014 aa15.8■□□□□ 0.12
CLN6-216ENST00000636876 RALBP11234 206 aa15.8■□□□□ 0.12
CLN6-216ENST00000636876 OGNP20774 298 aaKnown RBP15.8■□□□□ 0.12
CLN6-216ENST00000636876 PMLP29590 882 aa15.8■□□□□ 0.12
CLN6-216ENST00000636876 PPARGP37231 505 aaPredicted RBP15.8■□□□□ 0.12
CLN6-216ENST00000636876 GNPDA1P46926 289 aa15.8■□□□□ 0.12
CLN6-216ENST00000636876 TTPAP49638 278 aa15.8■□□□□ 0.12
CLN6-216ENST00000636876 GPX6P59796 221 aa15.8■□□□□ 0.12
CLN6-216ENST00000636876 HNRNPKP61978 463 aaKnown RBP eCLIP15.8■□□□□ 0.12
CLN6-216ENST00000636876 GTF2H3Q13889 308 aa15.8■□□□□ 0.12
CLN6-216ENST00000636876 SHBQ15464 509 aa15.8■□□□□ 0.12
CLN6-216ENST00000636876 ERCC6LQ2NKX8 1250 aa15.8■□□□□ 0.12
CLN6-216ENST00000636876 TYSND1Q2T9J0 566 aa15.8■□□□□ 0.12
CLN6-216ENST00000636876 HSP90AA5PQ58FG0 334 aa15.8■□□□□ 0.12
CLN6-216ENST00000636876 ZNF470Q6ECI4 717 aa15.8■□□□□ 0.12
CLN6-216ENST00000636876 TRMT10BQ6PF06 316 aaKnown RBP15.8■□□□□ 0.12
CLN6-216ENST00000636876 PACS1Q6VY07 963 aa15.8■□□□□ 0.12
CLN6-216ENST00000636876 CAPN12Q6ZSI9 719 aa15.8■□□□□ 0.12
CLN6-216ENST00000636876 SDCCAG8Q86SQ7 713 aaPredicted RBP15.8■□□□□ 0.12
CLN6-216ENST00000636876 LDB1Q86U70 411 aaPredicted RBP15.8■□□□□ 0.12
CLN6-216ENST00000636876 GALNT13Q8IUC8 556 aa15.8■□□□□ 0.12
CLN6-216ENST00000636876 CILP2Q8IUL8 1156 aa15.8■□□□□ 0.12
CLN6-216ENST00000636876 RBFAQ8N0V3 343 aa15.8■□□□□ 0.12
CLN6-216ENST00000636876 RASGEF1AQ8N9B8 481 aa15.8■□□□□ 0.12
CLN6-216ENST00000636876 CALML6Q8TD86 181 aa15.8■□□□□ 0.12
CLN6-216ENST00000636876 OR2M4Q96R27 311 aa15.8■□□□□ 0.12
CLN6-216ENST00000636876 TCF12Q99081 682 aa15.8■□□□□ 0.12
CLN6-216ENST00000636876 BOCQ9BWV1 1114 aa15.8■□□□□ 0.12
CLN6-216ENST00000636876 SLC13A1Q9BZW2 595 aa15.8■□□□□ 0.12
CLN6-216ENST00000636876 APOBEC3BQ9UH17 382 aaKnown RBP15.8■□□□□ 0.12
CLN6-216ENST00000636876 PCYT1BQ9Y5K3 369 aaPredicted RBP15.8■□□□□ 0.12
CLN6-216ENST00000636876 SCAMP1O15126 338 aa15.79■□□□□ 0.12
CLN6-216ENST00000636876 NDUFS3O75489 264 aa15.79■□□□□ 0.12
CLN6-216ENST00000636876 PIAS2O75928 621 aa15.79■□□□□ 0.12
CLN6-216ENST00000636876 ATP1B2P14415 290 aaPredicted RBP15.79■□□□□ 0.12
CLN6-216ENST00000636876 SSTR1P30872 391 aa15.79■□□□□ 0.12
CLN6-216ENST00000636876 CCT8P50990 548 aa15.79■□□□□ 0.12
CLN6-216ENST00000636876 CTSCP53634 463 aa15.79■□□□□ 0.12
CLN6-216ENST00000636876 VSNL1P62760 191 aa15.79■□□□□ 0.12
CLN6-216ENST00000636876 MGAT5Q09328 741 aa15.79■□□□□ 0.12
CLN6-216ENST00000636876 AASDHQ4L235 1098 aaPredicted RBP15.79■□□□□ 0.12
CLN6-216ENST00000636876 PYCR3Q53H96 274 aa15.79■□□□□ 0.12
CLN6-216ENST00000636876 CCNI2Q6ZMN8 369 aaPredicted RBP15.79■□□□□ 0.12
CLN6-216ENST00000636876 C3orf62Q6ZUJ4 267 aa15.79■□□□□ 0.12
CLN6-216ENST00000636876 GSPT2Q8IYD1 628 aaKnown RBP15.79■□□□□ 0.12
CLN6-216ENST00000636876 GABPB2Q8TAK5 448 aaPredicted RBP15.79■□□□□ 0.12
CLN6-216ENST00000636876 SCG3Q8WXD2 468 aaKnown RBP15.79■□□□□ 0.12
CLN6-216ENST00000636876 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.79■□□□□ 0.12
CLN6-216ENST00000636876 ZNF514Q96K75 400 aaPredicted RBP15.79■□□□□ 0.12
CLN6-216ENST00000636876 LRRC4CQ9HCJ2 640 aa15.79■□□□□ 0.12
CLN6-216ENST00000636876 RXFP3Q9NSD7 469 aa15.79■□□□□ 0.12
CLN6-216ENST00000636876 IARS2Q9NSE4 1012 aaKnown RBP15.79■□□□□ 0.12
CLN6-216ENST00000636876 DNAAF2Q9NVR5 837 aaKnown RBP15.79■□□□□ 0.12
CLN6-216ENST00000636876 MOCS1Q9NZB8 636 aa15.79■□□□□ 0.12
CLN6-216ENST00000636876 NINJ2Q9NZG7 142 aa15.79■□□□□ 0.12
CLN6-216ENST00000636876 ZNHIT2Q9UHR6 403 aa15.79■□□□□ 0.12
CLN6-216ENST00000636876 FBXO5Q9UKT4 447 aa15.79■□□□□ 0.12
CLN6-216ENST00000636876 PRKAB1Q9Y478 270 aa15.79■□□□□ 0.12
CLN6-216ENST00000636876 NCOR2Q9Y618 2525 aa15.78■□□□□ 0.12
CLN6-216ENST00000636876 CDX4O14627 284 aaPredicted RBP15.78■□□□□ 0.12
CLN6-216ENST00000636876 PFDN6O15212 129 aa15.78■□□□□ 0.12
CLN6-216ENST00000636876 KMOO15229 486 aa15.78■□□□□ 0.12
CLN6-216ENST00000636876 GRID2O43424 1007 aa15.78■□□□□ 0.12
CLN6-216ENST00000636876 SGTAO43765 313 aa15.78■□□□□ 0.12
CLN6-216ENST00000636876 OR1I1O60431 355 aa15.78■□□□□ 0.12
CLN6-216ENST00000636876 SPAG6O75602 509 aa15.78■□□□□ 0.12
CLN6-216ENST00000636876 FAM153BP0C7A2 387 aa15.78■□□□□ 0.12
CLN6-216ENST00000636876 ZNF883P0CG24 379 aa15.78■□□□□ 0.12
CLN6-216ENST00000636876 ZNF7P17097 686 aaPredicted RBP15.78■□□□□ 0.12
CLN6-216ENST00000636876 EPHA8P29322 1005 aaPredicted RBP15.78■□□□□ 0.12
CLN6-216ENST00000636876 NSG1P42857 185 aa15.78■□□□□ 0.12
CLN6-216ENST00000636876 SLC1A2P43004 574 aa15.78■□□□□ 0.12
CLN6-216ENST00000636876 ID4P47928 161 aa15.78■□□□□ 0.12
CLN6-216ENST00000636876 IL9RQ01113 521 aa15.78■□□□□ 0.12
CLN6-216ENST00000636876 BNIP3Q12983 259 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms