RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	CTDSP2	O14595	271 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	PPEF2	O14830	753 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	GPR182	O15218	404 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	CAPN5	O15484	640 aa	Predicted RBP	10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	OR7A10	O76100	309 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	EPN2	O95208	641 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	HPR	P00739	348 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	IL7	P13232	177 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	HSD17B1	P14061	328 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	TFEB	P19484	476 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	ELK4	P28324	431 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	ADORA2B	P29275	332 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	RFC2	P35250	354 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	RPS5	P46782	204 aa	Known RBP	10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	GNPDA1	P46926	289 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	ATP5O	P48047	213 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	LHX1	P48742	406 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	BCAR1	P56945	870 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	NKX3-2	P78367	333 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	FADD	Q13158	208 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	PLCL1	Q15111	1095 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	CDO1	Q16878	200 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	CATSPERE	Q5SY80	951 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	C6orf141	Q5SZD1	244 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	AGAP9	Q5VTM2	703 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	LETMD1	Q6P1Q0	360 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	SCYL2	Q6P3W7	929 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	LYPD8	Q6UX82	237 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	NAPRT	Q6XQN6	538 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	ADGRG5	Q8IZF4	528 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	C8orf59	Q8N0T1	100 aa	Predicted RBP	10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	B3GALNT2	Q8NCR0	500 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	SMG8	Q8ND04	991 aa	Known RBP	10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	MCFD2	Q8NI22	146 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	BLOC1S5	Q8TDH9	187 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	TMEM40	Q8WWA1	233 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	GLMN	Q92990	594 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	HDAC10	Q969S8	669 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	ELMO2	Q96JJ3	720 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	CITED4	Q96RK1	184 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	TM9SF2	Q99805	663 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	TRAF4	Q9BUZ4	470 aa	Predicted RBP	10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	SLC25A23	Q9BV35	468 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	EPS8L2	Q9H6S3	715 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	PAQR5	Q9NXK6	330 aa	Predicted RBP	10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	EIF3K	Q9UBQ5	218 aa	Known RBP	10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	SFMBT1	Q9UHJ3	866 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	PDE10A	Q9Y233	779 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	HCN4	Q9Y3Q4	1203 aa		10.68	□□□□□ -0.7
CHD2-223	ENST00000636306	TRIP12	Q14669	1992 aa	Predicted RBP	10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	MAGEB16	A2A368	324 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306		H0Y626	953 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306		H0YC42	278 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	PIK3R2	O00459	728 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	NRP1	O14786	923 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	MRAS	O14807	208 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	TBX1	O43435	398 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	LDLR	P01130	860 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	SNRPB2	P08579	225 aa	Known RBP	10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	CYBA	P13498	195 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	GFAP	P14136	432 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	PCMT1	P22061	227 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	DNAJB1	P25685	340 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	ACVR2A	P27037	513 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	TYK2	P29597	1187 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	SHMT2	P34897	504 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	ARL4A	P40617	200 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	NR2C2	P49116	596 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	ETV1	P50549	477 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	TPD52	P55327	224 aa	Predicted RBP	10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	BAMBI	Q13145	260 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	GEN1	Q17RS7	908 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	GNAS	Q5JWF2	1037 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	GRTP1	Q5TC63	336 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	PXDC1	Q5TGL8	231 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	TRAF7	Q6Q0C0	670 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	GK5	Q6ZS86	529 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	PELI3	Q8N2H9	469 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	NDNF	Q8TB73	568 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	NCLN	Q969V3	563 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	AURKB	Q96GD4	344 aa	Predicted RBP	10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	TOE1	Q96GM8	510 aa	Known RBP	10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	MUS81	Q96NY9	551 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	ZNF300	Q96RE9	604 aa	Predicted RBP	10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	PEBP4	Q96S96	227 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	HOPX	Q9BPY8	73 aa	Predicted RBP	10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	SNRNP25	Q9BV90	132 aa	Known RBP	10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	TIGAR	Q9NQ88	270 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	OXSM	Q9NWU1	459 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	KLK14	Q9P0G3	267 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	ACTR3B	Q9P1U1	418 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	SAE1	Q9UBE0	346 aa	Predicted RBP	10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	STOML2	Q9UJZ1	356 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	AURKC	Q9UQB9	309 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	DOCK3	Q8IZD9	2030 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306		A0A0X1KG70	313 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	BCLAF3	A2AJT9	711 aa	Known RBP	10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	CCDC78	A2IDD5	438 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	BBIP1	A8MTZ0	92 aa		10.67	□□□□□ -0.7
CHD2-223	ENST00000636306	LOC110117498-PIK3R3	F6TDL0	507 aa		10.67	□□□□□ -0.7

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