RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 DDI1Q8WTU0 396 aa2.97□□□□□ -1.93
PSPC1-208ENST00000635562 GLMPQ8WWB7 406 aa2.97□□□□□ -1.93
PSPC1-208ENST00000635562 PRPF31Q8WWY3 499 aaKnown RBP2.97□□□□□ -1.93
PSPC1-208ENST00000635562 SMARCE1Q969G3 411 aa2.97□□□□□ -1.93
PSPC1-208ENST00000635562 REPS1Q96D71 796 aa2.97□□□□□ -1.93
PSPC1-208ENST00000635562 C14orf79Q96F83 325 aa2.97□□□□□ -1.93
PSPC1-208ENST00000635562 VCPIP1Q96JH7 1222 aa2.97□□□□□ -1.93
PSPC1-208ENST00000635562 SNX18Q96RF0 628 aa2.97□□□□□ -1.93
PSPC1-208ENST00000635562 GAL3ST4Q96RP7 486 aa2.97□□□□□ -1.93
PSPC1-208ENST00000635562 USP28Q96RU2 1077 aa2.97□□□□□ -1.93
PSPC1-208ENST00000635562 TIMP4Q99727 224 aa2.97□□□□□ -1.93
PSPC1-208ENST00000635562 NPAS1Q99742 590 aa2.97□□□□□ -1.93
PSPC1-208ENST00000635562 LLPHQ9BRT6 129 aaKnown RBP2.97□□□□□ -1.93
PSPC1-208ENST00000635562 DPCDQ9BVM2 203 aaPredicted RBP2.97□□□□□ -1.93
PSPC1-208ENST00000635562 MRPL37Q9BZE1 423 aaKnown RBP2.97□□□□□ -1.93
PSPC1-208ENST00000635562 CRNKL1Q9BZJ0 848 aaKnown RBP2.97□□□□□ -1.93
PSPC1-208ENST00000635562 PNNQ9H307 717 aaKnown RBP2.97□□□□□ -1.93
PSPC1-208ENST00000635562 TMEM206Q9H813 350 aa2.97□□□□□ -1.93
PSPC1-208ENST00000635562 LRRC40Q9H9A6 602 aa2.97□□□□□ -1.93
PSPC1-208ENST00000635562 UCK1Q9HA47 277 aa2.97□□□□□ -1.93
PSPC1-208ENST00000635562 SCPEP1Q9HB40 452 aa2.97□□□□□ -1.93
PSPC1-208ENST00000635562 WDR6Q9NNW5 1121 aaKnown RBP2.97□□□□□ -1.93
PSPC1-208ENST00000635562 CENPMQ9NSP4 180 aa2.97□□□□□ -1.93
PSPC1-208ENST00000635562 RAB20Q9NX57 234 aa2.97□□□□□ -1.93
PSPC1-208ENST00000635562 ZDHHC7Q9NXF8 308 aa2.97□□□□□ -1.93
PSPC1-208ENST00000635562 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.97□□□□□ -1.93
PSPC1-208ENST00000635562 CNIH4Q9P003 139 aa2.97□□□□□ -1.93
PSPC1-208ENST00000635562 KLHL9Q9P2J3 617 aa2.97□□□□□ -1.93
PSPC1-208ENST00000635562 MGAT4CQ9UBM8 478 aa2.97□□□□□ -1.93
PSPC1-208ENST00000635562 DDX25Q9UHL0 483 aaKnown RBP2.97□□□□□ -1.93
PSPC1-208ENST00000635562 BAIAP2L1Q9UHR4 511 aa2.97□□□□□ -1.93
PSPC1-208ENST00000635562 ATPIF1Q9UII2 106 aa2.97□□□□□ -1.93
PSPC1-208ENST00000635562 AMFRQ9UKV5 643 aa2.97□□□□□ -1.93
PSPC1-208ENST00000635562 CORO1CQ9ULV4 474 aaPredicted RBP2.97□□□□□ -1.93
PSPC1-208ENST00000635562 ADAMTS5Q9UNA0 930 aa2.97□□□□□ -1.93
PSPC1-208ENST00000635562 DNAJC16Q9Y2G8 782 aa2.97□□□□□ -1.93
PSPC1-208ENST00000635562 DERAQ9Y315 318 aa2.97□□□□□ -1.93
PSPC1-208ENST00000635562 UBE2J1Q9Y385 318 aaPredicted RBP2.97□□□□□ -1.93
PSPC1-208ENST00000635562 ATP6V1DQ9Y5K8 247 aa2.97□□□□□ -1.93
PSPC1-208ENST00000635562 ENTPD2Q9Y5L3 495 aa2.97□□□□□ -1.93
PSPC1-208ENST00000635562 TRPV2Q9Y5S1 764 aa2.97□□□□□ -1.93
PSPC1-208ENST00000635562 CARMIL1Q5VZK9 1371 aa2.97□□□□□ -1.93
PSPC1-208ENST00000635562 CGNL1Q0VF96 1302 aa2.96□□□□□ -1.93
PSPC1-208ENST00000635562 TARSL2A2RTX5 802 aaKnown RBP2.96□□□□□ -1.94
PSPC1-208ENST00000635562 HEATR9A2RTY3 570 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 DENND3A2RUS2 1198 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 VWA3AA6NCI4 1184 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 MFSD2BA6NFX1 497 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 DNAJC9-AS1A6NH13 148 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 TTC34A8MYJ7 566 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 KIF28PB7ZC32 967 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 CES2O00748 559 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 RASGRF2O14827 1237 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 ATP2A1O14983 1001 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 PRPF4O43172 522 aaKnown RBP eCLIP2.96□□□□□ -1.94
PSPC1-208ENST00000635562 TGFB1I1O43294 461 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 IDH1O75874 414 aaKnown RBP2.96□□□□□ -1.94
PSPC1-208ENST00000635562 OR2C1O95371 312 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 DDAH2O95865 285 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 ECDO95905 644 aaPredicted RBP2.96□□□□□ -1.94
PSPC1-208ENST00000635562 TFRCP02786 760 aaKnown RBP2.96□□□□□ -1.94
PSPC1-208ENST00000635562 CSF2P04141 144 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 FYNP06241 537 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 CYC1P08574 325 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 NPSP0C0P6 89 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 ALADP13716 330 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 APEHP13798 732 aaKnown RBP2.96□□□□□ -1.94
PSPC1-208ENST00000635562 ETS1P14921 441 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 IGFBP2P18065 325 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 SAT1P21673 171 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 MMP8P22894 467 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 FPR3P25089 353 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 SERPINA4P29622 427 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 AVPR2P30518 371 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 CORO1AP31146 461 aaKnown RBP2.96□□□□□ -1.94
PSPC1-208ENST00000635562 BSGP35613 385 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 GGT5P36269 586 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 PGM1P36871 562 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 PLA2G5P39877 138 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 HARS2P49590 506 aaKnown RBP2.96□□□□□ -1.94
PSPC1-208ENST00000635562 STARP49675 285 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 RPS6KA3P51812 740 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 PDE1AP54750 535 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 NAGLUP54802 743 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 SOX10P56693 466 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 GSCP56915 257 aaPredicted RBP2.96□□□□□ -1.94
PSPC1-208ENST00000635562 FOXL2P58012 376 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 KIAA1024LP59773 190 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 ARPC4P59998 168 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 DSTNP60981 165 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 UBE2HP62256 183 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 GSTO1P78417 241 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 CFHR3Q02985 330 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 DMPKQ09013 629 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 TBL3Q12788 808 aaKnown RBP2.96□□□□□ -1.94
PSPC1-208ENST00000635562 CAMK1Q14012 370 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 DGAT2L7PQ6IED9 249 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 FAM173BQ6P4H8 233 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 ERICH5Q6P6B1 374 aa2.96□□□□□ -1.94
PSPC1-208ENST00000635562 KIRREL2Q6UWL6 708 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms