RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 TMPRSS11EQ9UL52 423 aa14.31□□□□□ -0.12
LINC00339-208ENST00000634934 HS3ST3A1Q9Y663 406 aa14.31□□□□□ -0.12
LINC00339-208ENST00000634934 PLXND1Q9Y4D7 1925 aa14.3□□□□□ -0.12
LINC00339-208ENST00000634934 SCN8AQ9UQD0 1980 aa14.3□□□□□ -0.12
LINC00339-208ENST00000634934 DOCK9Q9BZ29 2069 aa14.3□□□□□ -0.12
LINC00339-208ENST00000634934 FAM159BA6NKW6 160 aa14.3□□□□□ -0.12
LINC00339-208ENST00000634934 CXorf49A8MYA2 514 aaPredicted RBP14.3□□□□□ -0.12
LINC00339-208ENST00000634934 MGRN1O60291 552 aa14.3□□□□□ -0.12
LINC00339-208ENST00000634934 SNX3O60493 162 aa14.3□□□□□ -0.12
LINC00339-208ENST00000634934 MTX2O75431 263 aa14.3□□□□□ -0.12
LINC00339-208ENST00000634934 RHOBTB1O94844 696 aa14.3□□□□□ -0.12
LINC00339-208ENST00000634934 SLC1A2P43004 574 aa14.3□□□□□ -0.12
LINC00339-208ENST00000634934 DBN1Q16643 649 aa14.3□□□□□ -0.12
LINC00339-208ENST00000634934 GPRC6AQ5T6X5 926 aa14.3□□□□□ -0.12
LINC00339-208ENST00000634934 TEDDM1Q5T9Z0 273 aa14.3□□□□□ -0.12
LINC00339-208ENST00000634934 CERS6Q6ZMG9 384 aa14.3□□□□□ -0.12
LINC00339-208ENST00000634934 GCNT7Q6ZNI0 430 aa14.3□□□□□ -0.12
LINC00339-208ENST00000634934 RGS9BPQ6ZS82 235 aa14.3□□□□□ -0.12
LINC00339-208ENST00000634934 CILP2Q8IUL8 1156 aa14.3□□□□□ -0.12
LINC00339-208ENST00000634934 PHYKPLQ8IUZ5 450 aa14.3□□□□□ -0.12
LINC00339-208ENST00000634934 LMNTD2Q8IXW0 634 aa14.3□□□□□ -0.12
LINC00339-208ENST00000634934 PPM1NQ8N819 430 aa14.3□□□□□ -0.12
LINC00339-208ENST00000634934 TMEM145Q8NBT3 493 aa14.3□□□□□ -0.12
LINC00339-208ENST00000634934 HIC2Q96JB3 615 aa14.3□□□□□ -0.12
LINC00339-208ENST00000634934 BMFQ96LC9 184 aa14.3□□□□□ -0.12
LINC00339-208ENST00000634934 VPS35Q96QK1 796 aa14.3□□□□□ -0.12
LINC00339-208ENST00000634934 APOOQ9BUR5 198 aa14.3□□□□□ -0.12
LINC00339-208ENST00000634934 ACSS3Q9H6R3 686 aa14.3□□□□□ -0.12
LINC00339-208ENST00000634934 PHPT1Q9NRX4 125 aaPredicted RBP14.3□□□□□ -0.12
LINC00339-208ENST00000634934 SENP1Q9P0U3 644 aa14.3□□□□□ -0.12
LINC00339-208ENST00000634934 FBXO5Q9UKT4 447 aa14.3□□□□□ -0.12
LINC00339-208ENST00000634934 CNOT6Q9ULM6 557 aaKnown RBP14.3□□□□□ -0.12
LINC00339-208ENST00000634934 SLCO1B1Q9Y6L6 691 aa14.3□□□□□ -0.12
LINC00339-208ENST00000634934 TRBV5-4A0A0C4DH59 114 aa14.29□□□□□ -0.12
LINC00339-208ENST00000634934 CACNB4O00305 520 aaPredicted RBP14.29□□□□□ -0.12
LINC00339-208ENST00000634934 PFDN6O15212 129 aa14.29□□□□□ -0.12
LINC00339-208ENST00000634934 NDUFS3O75489 264 aa14.29□□□□□ -0.12
LINC00339-208ENST00000634934 OGNP20774 298 aaKnown RBP14.29□□□□□ -0.12
LINC00339-208ENST00000634934 ITPKAP23677 461 aa14.29□□□□□ -0.12
LINC00339-208ENST00000634934 ACRV1P26436 265 aa14.29□□□□□ -0.12
LINC00339-208ENST00000634934 TEAD1P28347 426 aa14.29□□□□□ -0.12
LINC00339-208ENST00000634934 AKT1P31749 480 aa14.29□□□□□ -0.12
LINC00339-208ENST00000634934 TRIM23P36406 574 aa14.29□□□□□ -0.12
LINC00339-208ENST00000634934 PPARGP37231 505 aaPredicted RBP14.29□□□□□ -0.12
LINC00339-208ENST00000634934 SKIV2L2P42285 1042 aaKnown RBP14.29□□□□□ -0.12
LINC00339-208ENST00000634934 TTPAP49638 278 aa14.29□□□□□ -0.12
LINC00339-208ENST00000634934 GTF2A1P52655 376 aaPredicted RBP14.29□□□□□ -0.12
LINC00339-208ENST00000634934 MPP1Q00013 466 aa14.29□□□□□ -0.12
LINC00339-208ENST00000634934 CDK3Q00526 305 aa14.29□□□□□ -0.12
LINC00339-208ENST00000634934 SPDYAQ5MJ70 313 aa14.29□□□□□ -0.12
LINC00339-208ENST00000634934 ZNF648Q5T619 568 aaPredicted RBP14.29□□□□□ -0.12
LINC00339-208ENST00000634934 LYPLAL1Q5VWZ2 237 aa14.29□□□□□ -0.12
LINC00339-208ENST00000634934 ZNF449Q6P9G9 518 aa14.29□□□□□ -0.12
LINC00339-208ENST00000634934 DOK6Q6PKX4 331 aa14.29□□□□□ -0.12
LINC00339-208ENST00000634934 CNTN4Q8IWV2 1026 aa14.29□□□□□ -0.12
LINC00339-208ENST00000634934 SUMF1Q8NBK3 374 aa14.29□□□□□ -0.12
LINC00339-208ENST00000634934 CKAP2Q8WWK9 683 aa14.29□□□□□ -0.12
LINC00339-208ENST00000634934 FUBP1Q96AE4 644 aaKnown RBP14.29□□□□□ -0.12
LINC00339-208ENST00000634934 DCUN1D1Q96GG9 259 aa14.29□□□□□ -0.12
LINC00339-208ENST00000634934 COPS8Q99627 209 aa14.29□□□□□ -0.12
LINC00339-208ENST00000634934 LGR4Q9BXB1 951 aa14.29□□□□□ -0.12
LINC00339-208ENST00000634934 TEX101Q9BY14 249 aa14.29□□□□□ -0.12
LINC00339-208ENST00000634934 FBXO6Q9NRD1 293 aaPredicted RBP14.29□□□□□ -0.12
LINC00339-208ENST00000634934 SMOXQ9NWM0 555 aa14.29□□□□□ -0.12
LINC00339-208ENST00000634934 ZDHHC3Q9NYG2 299 aa14.29□□□□□ -0.12
LINC00339-208ENST00000634934 TXNDC16Q9P2K2 825 aa14.29□□□□□ -0.12
LINC00339-208ENST00000634934 GON4LQ3T8J9 2241 aa14.29□□□□□ -0.12
LINC00339-208ENST00000634934 CEP192Q8TEP8 1941 aa14.28□□□□□ -0.12
LINC00339-208ENST00000634934 PLXNA2O75051 1894 aa14.28□□□□□ -0.12
LINC00339-208ENST00000634934 EXOC1LA0A1B0GW35 172 aa14.28□□□□□ -0.12
LINC00339-208ENST00000634934 AGAP14A8MT82 685 aa14.28□□□□□ -0.12
LINC00339-208ENST00000634934 POC1B-GALNT4F8VUJ3 575 aa14.28□□□□□ -0.12
LINC00339-208ENST00000634934 OR1I1O60431 355 aa14.28□□□□□ -0.12
LINC00339-208ENST00000634934 ASMTLO95671 621 aa14.28□□□□□ -0.12
LINC00339-208ENST00000634934 C1QAP02745 245 aa14.28□□□□□ -0.12
LINC00339-208ENST00000634934 MSH3P20585 1137 aa14.28□□□□□ -0.12
LINC00339-208ENST00000634934 RACK1P63244 317 aaKnown RBP14.28□□□□□ -0.12
LINC00339-208ENST00000634934 KLHL38Q2WGJ6 581 aa14.28□□□□□ -0.12
LINC00339-208ENST00000634934 LDLRAP1Q5SW96 308 aa14.28□□□□□ -0.12
LINC00339-208ENST00000634934 WLSQ5T9L3 541 aa14.28□□□□□ -0.12
LINC00339-208ENST00000634934 CYB5D1Q6P9G0 228 aa14.28□□□□□ -0.12
LINC00339-208ENST00000634934 KYAT3Q6YP21 454 aaKnown RBP14.28□□□□□ -0.12
LINC00339-208ENST00000634934 Q6ZSR6 202 aa14.28□□□□□ -0.12
LINC00339-208ENST00000634934 ASCL5Q7RTU5 278 aa14.28□□□□□ -0.12
LINC00339-208ENST00000634934 TRPM8Q7Z2W7 1104 aa14.28□□□□□ -0.12
LINC00339-208ENST00000634934 STRA8Q7Z7C7 330 aa14.28□□□□□ -0.12
LINC00339-208ENST00000634934 LRRC34Q8IZ02 419 aa14.28□□□□□ -0.12
LINC00339-208ENST00000634934 C2CD4AQ8NCU7 369 aaPredicted RBP14.28□□□□□ -0.12
LINC00339-208ENST00000634934 DDHD1Q8NEL9 900 aa14.28□□□□□ -0.12
LINC00339-208ENST00000634934 OR13H1Q8NG92 308 aa14.28□□□□□ -0.12
LINC00339-208ENST00000634934 MDM1Q8TC05 714 aa14.28□□□□□ -0.12
LINC00339-208ENST00000634934 EPS8L3Q8TE67 593 aaKnown RBP14.28□□□□□ -0.12
LINC00339-208ENST00000634934 DNASE2BQ8WZ79 361 aa14.28□□□□□ -0.12
LINC00339-208ENST00000634934 ZC3H10Q96K80 434 aaKnown RBP14.28□□□□□ -0.12
LINC00339-208ENST00000634934 TCF12Q99081 682 aa14.28□□□□□ -0.12
LINC00339-208ENST00000634934 SELENOSQ9BQE4 189 aa14.28□□□□□ -0.12
LINC00339-208ENST00000634934 BOCQ9BWV1 1114 aa14.28□□□□□ -0.12
LINC00339-208ENST00000634934 TM9SF3Q9HD45 589 aa14.28□□□□□ -0.12
LINC00339-208ENST00000634934 SSU72Q9NP77 194 aaKnown RBP14.28□□□□□ -0.12
LINC00339-208ENST00000634934 NSMCE4AQ9NXX6 385 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms