RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 CXorf40BQ96DE9 158 aa14.44□□□□□ -0.1
PNKP-218ENST00000625299 PCDH18Q9HCL0 1135 aa14.44□□□□□ -0.1
PNKP-218ENST00000625299 POT1Q9NUX5 634 aa14.44□□□□□ -0.1
PNKP-218ENST00000625299 RBM22Q9NW64 420 aaKnown RBP eCLIP14.44□□□□□ -0.11e-9■■■□□ 15.2
PNKP-218ENST00000625299 PCDHGA9Q9Y5G4 932 aaKnown RBP14.44□□□□□ -0.1
PNKP-218ENST00000625299 MFSD11O43934 449 aa14.43□□□□□ -0.1
PNKP-218ENST00000625299 CLDN1O95832 211 aa14.43□□□□□ -0.1
PNKP-218ENST00000625299 PRLP01236 227 aa14.43□□□□□ -0.1
PNKP-218ENST00000625299 FOLR1P15328 257 aa14.43□□□□□ -0.1
PNKP-218ENST00000625299 PTPN4P29074 926 aa14.43□□□□□ -0.1
PNKP-218ENST00000625299 PTGIRP43119 386 aa14.43□□□□□ -0.1
PNKP-218ENST00000625299 ARL4DP49703 201 aa14.43□□□□□ -0.1
PNKP-218ENST00000625299 CLCNKAP51800 687 aa14.43□□□□□ -0.1
PNKP-218ENST00000625299 DRG2P55039 364 aaKnown RBP14.43□□□□□ -0.1
PNKP-218ENST00000625299 MMRN1Q13201 1228 aa14.43□□□□□ -0.1
PNKP-218ENST00000625299 BOLA3Q53S33 107 aa14.43□□□□□ -0.1
PNKP-218ENST00000625299 JMJD6Q6NYC1 403 aaPredicted RBP14.43□□□□□ -0.1
PNKP-218ENST00000625299 IRF2BP2Q7Z5L9 587 aa14.43□□□□□ -0.1
PNKP-218ENST00000625299 ADGRG6Q86SQ4 1221 aa14.43□□□□□ -0.1
PNKP-218ENST00000625299 LRRTM4Q86VH4 590 aa14.43□□□□□ -0.1
PNKP-218ENST00000625299 RAVER1Q8IY67 606 aaKnown RBP14.43□□□□□ -0.1
PNKP-218ENST00000625299 LRRN4Q8WUT4 740 aa14.43□□□□□ -0.1
PNKP-218ENST00000625299 LYSMD1Q96S90 227 aa14.43□□□□□ -0.1
PNKP-218ENST00000625299 SYT11Q9BT88 431 aa14.43□□□□□ -0.1
PNKP-218ENST00000625299 GPR87Q9BY21 358 aa14.43□□□□□ -0.1
PNKP-218ENST00000625299 DTLQ9NZJ0 730 aa14.43□□□□□ -0.1
PNKP-218ENST00000625299 ZNF451Q9Y4E5 1061 aa14.43□□□□□ -0.1
PNKP-218ENST00000625299 ADGRG1Q9Y653 693 aa14.43□□□□□ -0.1
PNKP-218ENST00000625299 CELSR2Q9HCU4 2923 aa14.42□□□□□ -0.1
PNKP-218ENST00000625299 IGHV5-51A0A0C4DH38 117 aa14.42□□□□□ -0.1
PNKP-218ENST00000625299 MTX2O75431 263 aa14.42□□□□□ -0.1
PNKP-218ENST00000625299 HLA-DQB2P05538 268 aa14.42□□□□□ -0.1
PNKP-218ENST00000625299 EBLN1P0CF75 366 aa14.42□□□□□ -0.1
PNKP-218ENST00000625299 BRAFP15056 766 aa14.42□□□□□ -0.1
PNKP-218ENST00000625299 ZNF7P17097 686 aaPredicted RBP14.42□□□□□ -0.1
PNKP-218ENST00000625299 IL4RP24394 825 aa14.42□□□□□ -0.1
PNKP-218ENST00000625299 RPL26P61254 145 aaKnown RBP14.42□□□□□ -0.1
PNKP-218ENST00000625299 PDE1BQ01064 536 aa14.42□□□□□ -0.1
PNKP-218ENST00000625299 NIPAL4Q0D2K0 466 aa14.42□□□□□ -0.1
PNKP-218ENST00000625299 GALNT3Q14435 633 aa14.42□□□□□ -0.1
PNKP-218ENST00000625299 QPCTQ16769 361 aa14.42□□□□□ -0.1
PNKP-218ENST00000625299 CCDC122Q5T0U0 273 aa14.42□□□□□ -0.1
PNKP-218ENST00000625299 TIGD7Q6NT04 549 aaPredicted RBP14.42□□□□□ -0.1
PNKP-218ENST00000625299 MR1Q95460 341 aa14.42□□□□□ -0.1
PNKP-218ENST00000625299 ERGIC2Q96RQ1 377 aa14.42□□□□□ -0.1
PNKP-218ENST00000625299 MLPHQ9BV36 600 aaPredicted RBP14.42□□□□□ -0.1
PNKP-218ENST00000625299 TRIM39Q9HCM9 518 aa14.42□□□□□ -0.1
PNKP-218ENST00000625299 MRPL47Q9HD33 250 aaKnown RBP14.42□□□□□ -0.1
PNKP-218ENST00000625299 MLXIPLQ9NP71 852 aa14.42□□□□□ -0.1
PNKP-218ENST00000625299 HAUS2Q9NVX0 235 aa14.42□□□□□ -0.1
PNKP-218ENST00000625299 LIMA1Q9UHB6 759 aaKnown RBP14.42□□□□□ -0.1
PNKP-218ENST00000625299 RPL26L1Q9UNX3 145 aaKnown RBP14.42□□□□□ -0.1
PNKP-218ENST00000625299 DOPEY1Q5JWR5 2465 aa14.41□□□□□ -0.1
PNKP-218ENST00000625299 RGSL1A5PLK6 1076 aa14.41□□□□□ -0.1
PNKP-218ENST00000625299 A6NL46 340 aa14.41□□□□□ -0.1
PNKP-218ENST00000625299 KMOO15229 486 aa14.41□□□□□ -0.1
PNKP-218ENST00000625299 MATN3O15232 486 aa14.41□□□□□ -0.1
PNKP-218ENST00000625299 DPM1O60762 260 aa14.41□□□□□ -0.1
PNKP-218ENST00000625299 CDK11BP21127 795 aaKnown RBP14.41□□□□□ -0.1
PNKP-218ENST00000625299 CES1P23141 567 aa14.41□□□□□ -0.1
PNKP-218ENST00000625299 CD86P42081 329 aa14.41□□□□□ -0.1
PNKP-218ENST00000625299 SSR1P43307 286 aaKnown RBP14.41□□□□□ -0.1
PNKP-218ENST00000625299 GALNT2Q10471 571 aa14.41□□□□□ -0.1
PNKP-218ENST00000625299 ASIC2Q16515 512 aa14.41□□□□□ -0.1
PNKP-218ENST00000625299 ALG1LQ6GMV1 187 aa14.41□□□□□ -0.1
PNKP-218ENST00000625299 CERS6Q6ZMG9 384 aa14.41□□□□□ -0.1
PNKP-218ENST00000625299 Q8NA96 180 aa14.41□□□□□ -0.1
PNKP-218ENST00000625299 ARRDC2Q8TBH0 407 aa14.41□□□□□ -0.1
PNKP-218ENST00000625299 UBXN4Q92575 508 aa14.41□□□□□ -0.1
PNKP-218ENST00000625299 MAML1Q92585 1016 aa14.41□□□□□ -0.1
PNKP-218ENST00000625299 TCTN2Q96GX1 697 aa14.41□□□□□ -0.1
PNKP-218ENST00000625299 HAUS4Q9H6D7 363 aa14.41□□□□□ -0.1
PNKP-218ENST00000625299 SLC40A1Q9NP59 571 aa14.41□□□□□ -0.1
PNKP-218ENST00000625299 ERRFI1Q9UJM3 462 aaPredicted RBP14.41□□□□□ -0.1
PNKP-218ENST00000625299 G3BP2Q9UN86 482 aaKnown RBP14.41□□□□□ -0.1
PNKP-218ENST00000625299 SHOC2Q9UQ13 582 aa14.41□□□□□ -0.1
PNKP-218ENST00000625299 FARSAQ9Y285 508 aaKnown RBP14.41□□□□□ -0.1
PNKP-218ENST00000625299 LRBAP50851 2863 aa14.41□□□□□ -0.1
PNKP-218ENST00000625299 LRRC53A6NM62 1247 aa14.4□□□□□ -0.1
PNKP-218ENST00000625299 ANKRD66B4E2M5 251 aa14.4□□□□□ -0.1
PNKP-218ENST00000625299 GPR89AB7ZAQ6 455 aa14.4□□□□□ -0.1
PNKP-218ENST00000625299 ZNF185O15231 689 aa14.4□□□□□ -0.1
PNKP-218ENST00000625299 KRT86O43790 486 aa14.4□□□□□ -0.1
PNKP-218ENST00000625299 CPNE3O75131 537 aaKnown RBP14.4□□□□□ -0.1
PNKP-218ENST00000625299 SCRG1O75711 98 aa14.4□□□□□ -0.1
PNKP-218ENST00000625299 CD48P09326 243 aa14.4□□□□□ -0.1
PNKP-218ENST00000625299 PIRTP0C851 137 aa14.4□□□□□ -0.1
PNKP-218ENST00000625299 GPR89BP0CG08 455 aa14.4□□□□□ -0.1
PNKP-218ENST00000625299 IDSP22304 550 aa14.4□□□□□ -0.1
PNKP-218ENST00000625299 GJC1P36383 396 aa14.4□□□□□ -0.1
PNKP-218ENST00000625299 ACY1Q03154 408 aa14.4□□□□□ -0.1
PNKP-218ENST00000625299 PLCL1Q15111 1095 aa14.4□□□□□ -0.1
PNKP-218ENST00000625299 NR6A1Q15406 480 aa14.4□□□□□ -0.1
PNKP-218ENST00000625299 PAPD7Q5XG87 772 aaKnown RBP14.4□□□□□ -0.1
PNKP-218ENST00000625299 SLC6A19Q695T7 634 aa14.4□□□□□ -0.1
PNKP-218ENST00000625299 ABRAXAS1Q6UWZ7 409 aa14.4□□□□□ -0.1
PNKP-218ENST00000625299 ZNF571Q7Z3V5 609 aaPredicted RBP14.4□□□□□ -0.1
PNKP-218ENST00000625299 TRAPPC5Q8IUR0 188 aa14.4□□□□□ -0.1
PNKP-218ENST00000625299 TMEM126BQ8IUX1 230 aa14.4□□□□□ -0.1
PNKP-218ENST00000625299 LRRC49Q8IUZ0 686 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms