RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 GSDMDP57764 484 aa13.62□□□□□ -0.23
SNX1-214ENST00000625244 PTSQ03393 145 aa13.62□□□□□ -0.23
SNX1-214ENST00000625244 TRAF2Q12933 501 aa13.62□□□□□ -0.23
SNX1-214ENST00000625244 GPR18Q14330 331 aa13.62□□□□□ -0.23
SNX1-214ENST00000625244 HIF1AQ16665 826 aa13.62□□□□□ -0.23
SNX1-214ENST00000625244 LRRC66Q68CR7 880 aa13.62□□□□□ -0.23
SNX1-214ENST00000625244 KLHL10Q6JEL2 608 aa13.62□□□□□ -0.23
SNX1-214ENST00000625244 MRGPREQ86SM8 312 aa13.62□□□□□ -0.23
SNX1-214ENST00000625244 FAM71AQ8IYT1 594 aa13.62□□□□□ -0.23
SNX1-214ENST00000625244 ZNF808Q8N4W9 903 aaPredicted RBP13.62□□□□□ -0.23
SNX1-214ENST00000625244 CCDC120Q96HB5 630 aa13.62□□□□□ -0.23
SNX1-214ENST00000625244 LRFN5Q96NI6 719 aa13.62□□□□□ -0.23
SNX1-214ENST00000625244 PSKH2Q96QS6 385 aa13.62□□□□□ -0.23
SNX1-214ENST00000625244 SLX1AQ9BQ83 275 aa13.62□□□□□ -0.23
SNX1-214ENST00000625244 RAB33BQ9H082 229 aa13.62□□□□□ -0.23
SNX1-214ENST00000625244 OSGEPL1Q9H4B0 414 aa13.62□□□□□ -0.23
SNX1-214ENST00000625244 KLC4Q9NSK0 619 aa13.62□□□□□ -0.23
SNX1-214ENST00000625244 LMBRD1Q9NUN5 540 aa13.62□□□□□ -0.23
SNX1-214ENST00000625244 KIAA1468Q9P260 1216 aa13.62□□□□□ -0.23
SNX1-214ENST00000625244 A0A1W2PQJ5 194 aa13.61□□□□□ -0.23
SNX1-214ENST00000625244 ARHGAP42A6NI28 874 aa13.61□□□□□ -0.23
SNX1-214ENST00000625244 C19orf84I3L1E1 186 aa13.61□□□□□ -0.23
SNX1-214ENST00000625244 GRID2O43424 1007 aa13.61□□□□□ -0.23
SNX1-214ENST00000625244 IPO13O94829 963 aaKnown RBP13.61□□□□□ -0.23
SNX1-214ENST00000625244 PYGLP06737 847 aa13.61□□□□□ -0.23
SNX1-214ENST00000625244 CD99P14209 185 aa13.61□□□□□ -0.23
SNX1-214ENST00000625244 RORAP35398 523 aa13.61□□□□□ -0.23
SNX1-214ENST00000625244 CLCNKAP51800 687 aa13.61□□□□□ -0.23
SNX1-214ENST00000625244 KCNK10P57789 538 aa13.61□□□□□ -0.23
SNX1-214ENST00000625244 TUBB4BP68371 445 aa13.61□□□□□ -0.23
SNX1-214ENST00000625244 TUBB2AQ13885 445 aa13.61□□□□□ -0.23
SNX1-214ENST00000625244 RFTN1Q14699 578 aaPredicted RBP13.61□□□□□ -0.23
SNX1-214ENST00000625244 GPR19Q15760 415 aa13.61□□□□□ -0.23
SNX1-214ENST00000625244 SEPT7Q16181 437 aaKnown RBP13.61□□□□□ -0.23
SNX1-214ENST00000625244 DCAF10Q5QP82 559 aa13.61□□□□□ -0.23
SNX1-214ENST00000625244 ISM2Q6H9L7 571 aa13.61□□□□□ -0.23
SNX1-214ENST00000625244 ZNF765Q7L2R6 523 aa13.61□□□□□ -0.23
SNX1-214ENST00000625244 RAB43Q86YS6 212 aa13.61□□□□□ -0.23
SNX1-214ENST00000625244 AOPEPQ8N6M6 819 aa13.61□□□□□ -0.23
SNX1-214ENST00000625244 ZNF501Q96CX3 271 aaPredicted RBP13.61□□□□□ -0.23
SNX1-214ENST00000625244 PCMTD1Q96MG8 357 aaPredicted RBP13.61□□□□□ -0.23
SNX1-214ENST00000625244 MAP3K3Q99759 626 aa13.61□□□□□ -0.23
SNX1-214ENST00000625244 WDR77Q9BQA1 342 aaPredicted RBP13.61□□□□□ -0.23
SNX1-214ENST00000625244 TUBB2BQ9BVA1 445 aa13.61□□□□□ -0.23
SNX1-214ENST00000625244 RMI1Q9H9A7 625 aa13.61□□□□□ -0.23
SNX1-214ENST00000625244 SP110Q9HB58 689 aa13.61□□□□□ -0.23
SNX1-214ENST00000625244 NOD2Q9HC29 1040 aa13.61□□□□□ -0.23
SNX1-214ENST00000625244 SLC40A1Q9NP59 571 aa13.61□□□□□ -0.23
SNX1-214ENST00000625244 SIX2Q9NPC8 291 aa13.61□□□□□ -0.23
SNX1-214ENST00000625244 KCND1Q9NSA2 647 aa13.61□□□□□ -0.23
SNX1-214ENST00000625244 DNAJC12Q9UKB3 198 aa13.61□□□□□ -0.23
SNX1-214ENST00000625244 JMJD1CQ15652 2540 aa13.61□□□□□ -0.23
SNX1-214ENST00000625244 OR52A4PA6NMU1 304 aa13.6□□□□□ -0.23
SNX1-214ENST00000625244 FGF10O15520 208 aaPredicted RBP13.6□□□□□ -0.23
SNX1-214ENST00000625244 FAM155BO75949 473 aa13.6□□□□□ -0.23
SNX1-214ENST00000625244 GNA14O95837 355 aa13.6□□□□□ -0.23
SNX1-214ENST00000625244 DRD2P14416 443 aa13.6□□□□□ -0.23
SNX1-214ENST00000625244 BRAFP15056 766 aa13.6□□□□□ -0.23
SNX1-214ENST00000625244 PON1P27169 355 aa13.6□□□□□ -0.23
SNX1-214ENST00000625244 TSFMP43897 325 aaKnown RBP13.6□□□□□ -0.23
SNX1-214ENST00000625244 BPIFB4P59827 614 aa13.6□□□□□ -0.23
SNX1-214ENST00000625244 NOMO3P69849 1222 aa13.6□□□□□ -0.23
SNX1-214ENST00000625244 SLC10A7Q0GE19 358 aa13.6□□□□□ -0.23
SNX1-214ENST00000625244 STIM1Q13586 685 aa13.6□□□□□ -0.23
SNX1-214ENST00000625244 NAA35Q5VZE5 725 aa13.6□□□□□ -0.23
SNX1-214ENST00000625244 GBP6Q6ZN66 633 aa13.6□□□□□ -0.23
SNX1-214ENST00000625244 USP45Q70EL2 814 aa13.6□□□□□ -0.23
SNX1-214ENST00000625244 ARHGAP12Q8IWW6 846 aa13.6□□□□□ -0.23
SNX1-214ENST00000625244 D2HGDHQ8N465 521 aa13.6□□□□□ -0.23
SNX1-214ENST00000625244 CLEC1AQ8NC01 280 aa13.6□□□□□ -0.23
SNX1-214ENST00000625244 MSANTD4Q8NCY6 345 aa13.6□□□□□ -0.23
SNX1-214ENST00000625244 PIH1D2Q8WWB5 315 aa13.6□□□□□ -0.23
SNX1-214ENST00000625244 NELFBQ8WX92 580 aa13.6□□□□□ -0.23
SNX1-214ENST00000625244 FER1L6-AS2Q96M78 137 aa13.6□□□□□ -0.23
SNX1-214ENST00000625244 NUP62CLQ9H1M0 184 aa13.6□□□□□ -0.23
SNX1-214ENST00000625244 POT1Q9NUX5 634 aa13.6□□□□□ -0.23
SNX1-214ENST00000625244 SLC23A2Q9UGH3 650 aa13.6□□□□□ -0.23
SNX1-214ENST00000625244 FZD10Q9ULW2 581 aa13.6□□□□□ -0.23
SNX1-214ENST00000625244 PPIL1Q9Y3C6 166 aa13.6□□□□□ -0.23
SNX1-214ENST00000625244 NEU2Q9Y3R4 380 aa13.6□□□□□ -0.23
SNX1-214ENST00000625244 FADS2P1A8MWK0 482 aa13.59□□□□□ -0.23
SNX1-214ENST00000625244 NUAK1O60285 661 aa13.59□□□□□ -0.23
SNX1-214ENST00000625244 JRKO75564 520 aa13.59□□□□□ -0.23
SNX1-214ENST00000625244 PGLSO95336 258 aa13.59□□□□□ -0.23
SNX1-214ENST00000625244 LSM8O95777 96 aaKnown RBP13.59□□□□□ -0.23
SNX1-214ENST00000625244 ZNF8P17098 575 aaPredicted RBP13.59□□□□□ -0.23
SNX1-214ENST00000625244 PPP1R2P41236 205 aa13.59□□□□□ -0.23
SNX1-214ENST00000625244 ARL4DP49703 201 aa13.59□□□□□ -0.23
SNX1-214ENST00000625244 RENBPP51606 427 aa13.59□□□□□ -0.23
SNX1-214ENST00000625244 HSD11B2P80365 405 aa13.59□□□□□ -0.23
SNX1-214ENST00000625244 ABRQ12979 859 aa13.59□□□□□ -0.23
SNX1-214ENST00000625244 CDC16Q13042 620 aa13.59□□□□□ -0.23
SNX1-214ENST00000625244 LBRQ14739 615 aaKnown RBP13.59□□□□□ -0.23
SNX1-214ENST00000625244 NCF4Q15080 339 aa13.59□□□□□ -0.23
SNX1-214ENST00000625244 EXOC3L4Q17RC7 722 aa13.59□□□□□ -0.23
SNX1-214ENST00000625244 ZNF648Q5T619 568 aaPredicted RBP13.59□□□□□ -0.23
SNX1-214ENST00000625244 SCYL2Q6P3W7 929 aa13.59□□□□□ -0.23
SNX1-214ENST00000625244 PGBD5Q8N414 524 aa13.59□□□□□ -0.23
SNX1-214ENST00000625244 TTC30BQ8N4P2 665 aa13.59□□□□□ -0.23
SNX1-214ENST00000625244 C14orf79Q96F83 325 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms