RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 S100A3P33764 101 aa8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 FOXM1Q08050 763 aa8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 DPYSQ14117 519 aa8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 PAFAH1B3Q15102 231 aaKnown RBP8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 ZBTB6Q15916 424 aa8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 PCID2Q5JVF3 399 aa8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 GCNT7Q6ZNI0 430 aa8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 TMEM135Q86UB9 458 aa8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 MMAAQ8IVH4 418 aaKnown RBP8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 PARP8Q8N3A8 854 aa8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 FSTL5Q8N475 847 aaPredicted RBP8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 TMEM40Q8WWA1 233 aa8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 CCDC126Q96EE4 140 aa8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 OXSMQ9NWU1 459 aa8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 ZNF229Q9UJW7 825 aa8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 POLEQ07864 2286 aa8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 PTPRFP10586 1907 aa8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 MYOCOSA0A1B0GUC4 107 aa8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 UBXN8O00124 270 aa8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 SNAP91O60641 907 aa8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 SCN2BO60939 215 aa8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 WDR47O94967 919 aa8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 JUNP05412 331 aaKnown RBP8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 GSNP06396 782 aa8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 LINC00032P0C843 101 aa8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 CDH2P19022 906 aaPredicted RBP8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 GTF2E2P29084 291 aaKnown RBP8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 CD68P34810 354 aaPredicted RBP8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 ERVK-21P61565 698 aa8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 RPL38P63173 70 aaKnown RBP8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 HYAL2Q12891 473 aa8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 CYP2A13Q16696 494 aa8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 OTUD1Q5VV17 481 aaPredicted RBP8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 CYP20A1Q6UW02 462 aa8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 VITQ6UXI7 678 aa8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 ADGRG6Q86SQ4 1221 aa8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 ZNF280BQ86YH2 543 aa8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 POMGNT2Q8NAT1 580 aa8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 KLHL23Q8NBE8 558 aa8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 TRIB2Q92519 343 aa8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 NXNL1Q96CM4 212 aa8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 BTN2A3PQ96KV6 586 aa8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 KLHL32Q96NJ5 620 aa8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 HNRNPABQ99729 332 aaKnown RBP8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 GBA3Q9H227 469 aa8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 C11orf49Q9H6J7 331 aa8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 STK39Q9UEW8 545 aa8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 ATP6V1HQ9UI12 483 aa8.21□□□□□ -1.09
PTPDC1-204ENST00000620992 MAGEB16A2A368 324 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 NEMP2A6NFY4 417 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 OR51F1A6NGY5 319 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 E9PAM4 449 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 CACNB4O00305 520 aaPredicted RBP8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 MATN2O00339 956 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 FGF10O15520 208 aaPredicted RBP8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 APODP05090 189 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 CHRM1P11229 460 aaPredicted RBP8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 HLA-EP13747 358 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 PSMA4P25789 261 aaKnown RBP8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 SCNN1AP37088 669 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 VEGFBP49765 207 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 LPAL2Q16609 132 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 TTC33Q6PID6 262 aaPredicted RBP8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 LUZP2Q86TE4 346 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 ZC3H7AQ8IWR0 971 aaKnown RBP8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 TOP6BLQ8N6T0 577 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 OR56A4Q8NGH8 313 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 PPP1R14AQ96A00 147 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 UROC1Q96N76 676 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 CCT7Q99832 543 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 OSBPL10Q9BXB5 764 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 SHROOM3Q8TF72 1996 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 ARID1AO14497 2285 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 H3BQ06 376 aaPredicted RBP8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 MRASO14807 208 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 KPNA5O15131 536 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 ULK1O75385 1050 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 CLPTM1O96005 669 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 CCNA2P20248 432 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 ME2P23368 584 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 ITPKBP27987 946 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 PPP2R1BP30154 601 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 IDH2P48735 452 aaKnown RBP8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 CCT8P50990 548 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 APLP1P51693 650 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 CASP9P55211 416 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 DYNC1I2Q13409 638 aaKnown RBP8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 NRF1Q16656 503 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 AASDHQ4L235 1098 aaPredicted RBP8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 METTL21CQ5VZV1 264 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 SMYD5Q6GMV2 418 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 GPRIN1Q7Z2K8 1008 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 KBTBD6Q86V97 674 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 ADAMTS10Q9H324 1103 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 KIAA1522Q9P206 1035 aaPredicted RBP8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 VTI1BQ9UEU0 232 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 SLC45A1Q9Y2W3 748 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 NDUFAF1Q9Y375 327 aa8.21□□□□□ -1.1
PTPDC1-204ENST00000620992 TTC28Q96AY4 2481 aa8.2□□□□□ -1.1
PTPDC1-204ENST00000620992 CPED1A4D0V7 1026 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms