RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, human

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-233	ENST00000618836	SYT15	Q9BQS2	421 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	CENPK	Q9BS16	269 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	TUBB2B	Q9BVA1	445 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	GPR87	Q9BY21	358 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ANGPTL4	Q9BY76	406 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	GLIS2	Q9BZE0	524 aa	Predicted RBP	4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ALX4	Q9H161	411 aa	Predicted RBP	4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	SLC6A15	Q9H2J7	730 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	EPB41L1	Q9H4G0	881 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	GSX1	Q9H4S2	264 aa	Predicted RBP	4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	NMUR1	Q9HB89	426 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	FOLH1B	Q9HBA9	442 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	CHST11	Q9NPF2	352 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	DCP1A	Q9NPI6	582 aa	Predicted RBP	4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	NOP53	Q9NZM5	478 aa	Known RBP	4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	PKD2L1	Q9P0L9	805 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ADAMTS6	Q9UKP5	1117 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	VPS4A	Q9UN37	437 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	KCTD3	Q9Y597	815 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	SNX14	Q9Y5W7	946 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	KCNMB2	Q9Y691	235 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836		A0A075B6Q4	140 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	TRAV34	A0A0B4J273	112 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	MARCH11	A6NNE9	402 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	TRIM38	O00635	465 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	GNB5	O14775	395 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	EREG	O14944	169 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	KCNQ3	O43525	872 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	MTX2	O75431	263 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	AKR7A3	O95154	331 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	KAT7	O95251	611 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ANXA5	P08758	320 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	HNRNPA1	P09651	372 aa	Known RBP eCLIP	4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	UQCRFS1P1	P0C7P4	283 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	MX1	P20591	662 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	HNRNPA2B1	P22626	353 aa	Known RBP	4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	CXCR2	P25025	360 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ICAM3	P32942	547 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	TALDO1	P37837	337 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	PAFAH1B1	P43034	410 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	GPD2	P43304	727 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	NUP107	P57740	925 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	LRRC32	Q14392	662 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	INPP5A	Q14642	412 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	SNX17	Q15036	470 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	DECR1	Q16698	335 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	BMT2	Q1RMZ1	405 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ZSCAN23	Q3MJ62	389 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ACTBL2	Q562R1	376 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	JADE1	Q6IE81	842 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	OR5M10	Q6IEU7	315 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	HEPHL1	Q6MZM0	1159 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	RFWD3	Q6PCD5	774 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	TMEM270	Q6UE05	265 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	MFSD7	Q6UXD7	560 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	IL20RB	Q6UXL0	311 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	FKBP9P1	Q75LS8	142 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ZBED8	Q8IZ13	594 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ZNF366	Q8N895	744 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ASCC1	Q8N9N2	400 aa	Known RBP	4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	OR10J5	Q8NHC4	309 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	RP9	Q8TA86	221 aa	Known RBP	4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	FAM71B	Q8TC56	605 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	TGFBRAP1	Q8WUH2	860 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	MITD1	Q8WV92	249 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	PYDC1	Q8WXC3	89 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	THRSP	Q92748	146 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	YIPF5	Q969M3	257 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	SPSB4	Q96A44	273 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ZFYVE19	Q96K21	471 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	NECAB3	Q96P71	396 aa	Predicted RBP	4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	CHID1	Q9BWS9	393 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	SPATA16	Q9BXB7	569 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	MMP27	Q9H306	513 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	MAGEE1	Q9HCI5	957 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	S100A14	Q9HCY8	104 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	PALMD	Q9NP74	551 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ASCL3	Q9NQ33	180 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	TBC1D23	Q9NUY8	699 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ARL8B	Q9NVJ2	186 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	LRFN1	Q9P244	771 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	CORO2B	Q9UQ03	480 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	INSL6	Q9Y581	213 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	AP4B1	Q9Y6B7	739 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	MAU2	Q9Y6X3	613 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	MON2	Q7Z3U7	1717 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	RTL9	Q8NET4	1388 aa		4.05	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ZNF729	A6NN14	1252 aa	Predicted RBP	4.04	□□□□□ -1.76
UBE2D3-233	ENST00000618836	WASH4P	A8MWX3	477 aa		4.04	□□□□□ -1.76
UBE2D3-233	ENST00000618836	WRB	O00258	174 aa		4.04	□□□□□ -1.76
UBE2D3-233	ENST00000618836	DDX3X	O00571	662 aa	Known RBP eCLIP	4.04	□□□□□ -1.76
UBE2D3-233	ENST00000618836	CALU	O43852	315 aa	Predicted RBP	4.04	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ATP6V1G2	O95670	118 aa		4.04	□□□□□ -1.76
UBE2D3-233	ENST00000618836	OR8G3P	P0DMU2	310 aa		4.04	□□□□□ -1.76
UBE2D3-233	ENST00000618836	AKR1A1	P14550	325 aa		4.04	□□□□□ -1.76
UBE2D3-233	ENST00000618836	INSRR	P14616	1297 aa		4.04	□□□□□ -1.76
UBE2D3-233	ENST00000618836	ETS1	P14921	441 aa		4.04	□□□□□ -1.76
UBE2D3-233	ENST00000618836	MSH3	P20585	1137 aa		4.04	□□□□□ -1.76
UBE2D3-233	ENST00000618836	TCEA1	P23193	301 aa	Known RBP	4.04	□□□□□ -1.76
UBE2D3-233	ENST00000618836	TUBG1	P23258	451 aa		4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms