RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 ZNF773Q6PK81 442 aa20.21■□□□□ 0.83
NEK3-208ENST00000618534 ITIH5Q86UX2 942 aa20.21■□□□□ 0.83
NEK3-208ENST00000618534 MON1AQ86VX9 555 aa20.21■□□□□ 0.83
NEK3-208ENST00000618534 PROSER1Q86XN7 944 aa20.21■□□□□ 0.83
NEK3-208ENST00000618534 RIMKLAQ8IXN7 391 aa20.21■□□□□ 0.83
NEK3-208ENST00000618534 ACDQ96AP0 544 aa20.21■□□□□ 0.83
NEK3-208ENST00000618534 PLEKHA8Q96JA3 519 aa20.21■□□□□ 0.83
NEK3-208ENST00000618534 NSMCE2Q96MF7 247 aa20.21■□□□□ 0.83
NEK3-208ENST00000618534 HGH1Q9BTY7 390 aa20.21■□□□□ 0.83
NEK3-208ENST00000618534 TMEM9Q9P0T7 183 aa20.21■□□□□ 0.83
NEK3-208ENST00000618534 GMIPQ9P107 970 aa20.21■□□□□ 0.83
NEK3-208ENST00000618534 ASB1Q9Y576 335 aa20.21■□□□□ 0.83
NEK3-208ENST00000618534 PCDHGA11Q9Y5H2 935 aa20.21■□□□□ 0.83
NEK3-208ENST00000618534 DYTNA2CJ06 578 aa20.21■□□□□ 0.83
NEK3-208ENST00000618534 MYADML2A6NDP7 307 aa20.21■□□□□ 0.83
NEK3-208ENST00000618534 H0YAE9 185 aa20.21■□□□□ 0.83
NEK3-208ENST00000618534 NOL3O60936 208 aaKnown RBP20.21■□□□□ 0.83
NEK3-208ENST00000618534 ENO2P09104 434 aaPredicted RBP20.21■□□□□ 0.83
NEK3-208ENST00000618534 PSMD7P51665 324 aa20.21■□□□□ 0.83
NEK3-208ENST00000618534 C21orf59P57076 290 aa20.21■□□□□ 0.83
NEK3-208ENST00000618534 NFATC3Q12968 1075 aa20.21■□□□□ 0.83
NEK3-208ENST00000618534 MAP2K5Q13163 448 aa20.21■□□□□ 0.83
NEK3-208ENST00000618534 ZNF235Q14590 738 aa20.21■□□□□ 0.83
NEK3-208ENST00000618534 FXNQ16595 210 aa20.21■□□□□ 0.83
NEK3-208ENST00000618534 GLYATQ6IB77 296 aa20.21■□□□□ 0.83
NEK3-208ENST00000618534 ISG20Q96AZ6 181 aaKnown RBP20.21■□□□□ 0.83
NEK3-208ENST00000618534 SUSD3Q96L08 255 aa20.21■□□□□ 0.83
NEK3-208ENST00000618534 PARK7Q99497 189 aaKnown RBP20.21■□□□□ 0.83
NEK3-208ENST00000618534 TUBA1CQ9BQE3 449 aa20.21■□□□□ 0.83
NEK3-208ENST00000618534 LRRC3Q9BY71 257 aa20.21■□□□□ 0.83
NEK3-208ENST00000618534 SCML2Q9UQR0 700 aa20.21■□□□□ 0.83
NEK3-208ENST00000618534 GBF1Q92538 1859 aa20.2■□□□□ 0.82
NEK3-208ENST00000618534 FAM234BA2RU67 622 aa20.2■□□□□ 0.82
NEK3-208ENST00000618534 UPK1AO00322 258 aa20.2■□□□□ 0.82
NEK3-208ENST00000618534 HMBSP08397 361 aa20.2■□□□□ 0.82
NEK3-208ENST00000618534 ARSFP54793 590 aa20.2■□□□□ 0.82
NEK3-208ENST00000618534 GRSF1Q12849 480 aaKnown RBP eCLIP20.2■□□□□ 0.82
NEK3-208ENST00000618534 TRAF2Q12933 501 aa20.2■□□□□ 0.82
NEK3-208ENST00000618534 TUSC3Q13454 348 aa20.2■□□□□ 0.82
NEK3-208ENST00000618534 SELPLGQ14242 412 aa20.2■□□□□ 0.82
NEK3-208ENST00000618534 MORN1Q5T089 497 aa20.2■□□□□ 0.82
NEK3-208ENST00000618534 MIB1Q86YT6 1006 aa20.2■□□□□ 0.82
NEK3-208ENST00000618534 ZC3H7AQ8IWR0 971 aaKnown RBP20.2■□□□□ 0.82
NEK3-208ENST00000618534 FNDC5Q8NAU1 212 aa20.2■□□□□ 0.82
NEK3-208ENST00000618534 PDPRQ8NCN5 879 aa20.2■□□□□ 0.82
NEK3-208ENST00000618534 PNPT1Q8TCS8 783 aaKnown RBP20.2■□□□□ 0.82
NEK3-208ENST00000618534 PROKR1Q8TCW9 393 aa20.2■□□□□ 0.82
NEK3-208ENST00000618534 CCDC68Q9H2F9 335 aa20.2■□□□□ 0.82
NEK3-208ENST00000618534 ZIM2Q9NZV7 527 aa20.2■□□□□ 0.82
NEK3-208ENST00000618534 MAGED1Q9Y5V3 778 aaPredicted RBP20.2■□□□□ 0.82
NEK3-208ENST00000618534 SYCE1LA8MT33 242 aa20.19■□□□□ 0.82
NEK3-208ENST00000618534 STX16O14662 325 aa20.19■□□□□ 0.82
NEK3-208ENST00000618534 SYNCRIPO60506 623 aaKnown RBP20.19■□□□□ 0.82
NEK3-208ENST00000618534 ZBTB11O95625 1053 aaPredicted RBP20.19■□□□□ 0.82
NEK3-208ENST00000618534 CDH1P12830 882 aa20.19■□□□□ 0.82
NEK3-208ENST00000618534 TCF3P15923 654 aa20.19■□□□□ 0.82
NEK3-208ENST00000618534 C6orf136Q5SQH8 315 aa20.19■□□□□ 0.82
NEK3-208ENST00000618534 GDF6Q6KF10 455 aaPredicted RBP20.19■□□□□ 0.82
NEK3-208ENST00000618534 EFL1Q7Z2Z2 1120 aaKnown RBP20.19■□□□□ 0.82
NEK3-208ENST00000618534 MYEOVQ96EZ4 313 aa20.19■□□□□ 0.82
NEK3-208ENST00000618534 RPRD1AQ96P16 312 aaPredicted RBP20.19■□□□□ 0.82
NEK3-208ENST00000618534 EIF2B4Q9UI10 523 aaKnown RBP20.19■□□□□ 0.82
NEK3-208ENST00000618534 SPO11Q9Y5K1 396 aa20.19■□□□□ 0.82
NEK3-208ENST00000618534 ACTL7AQ9Y615 435 aa20.19■□□□□ 0.82
NEK3-208ENST00000618534 OR4F21O95013 312 aa20.19■□□□□ 0.82
NEK3-208ENST00000618534 MAP4P27816 1152 aaKnown RBP20.19■□□□□ 0.82
NEK3-208ENST00000618534 CD52P31358 61 aa20.19■□□□□ 0.82
NEK3-208ENST00000618534 MTPNP58546 118 aa20.19■□□□□ 0.82
NEK3-208ENST00000618534 ZFAND4Q86XD8 727 aa20.19■□□□□ 0.82
NEK3-208ENST00000618534 HID1Q8IV36 788 aa20.19■□□□□ 0.82
NEK3-208ENST00000618534 DTWD1Q8N5C7 304 aa20.19■□□□□ 0.82
NEK3-208ENST00000618534 CDYL2Q8N8U2 506 aa20.19■□□□□ 0.82
NEK3-208ENST00000618534 ATP6V0D2Q8N8Y2 350 aa20.19■□□□□ 0.82
NEK3-208ENST00000618534 LEMD2Q8NC56 503 aa20.19■□□□□ 0.82
NEK3-208ENST00000618534 TMBIM1Q969X1 311 aa20.19■□□□□ 0.82
NEK3-208ENST00000618534 COX4I2Q96KJ9 171 aa20.19■□□□□ 0.82
NEK3-208ENST00000618534 PPM1MQ96MI6 270 aa20.19■□□□□ 0.82
NEK3-208ENST00000618534 PTPN18Q99952 460 aa20.19■□□□□ 0.82
NEK3-208ENST00000618534 C1QTNF3Q9BXJ4 246 aa20.19■□□□□ 0.82
NEK3-208ENST00000618534 CPA4Q9UI42 421 aa20.19■□□□□ 0.82
NEK3-208ENST00000618534 SH3GLB1Q9Y371 365 aa20.19■□□□□ 0.82
NEK3-208ENST00000618534 TRPM7Q96QT4 1865 aa20.19■□□□□ 0.82
NEK3-208ENST00000618534 CBFA2T3O75081 653 aa20.18■□□□□ 0.82
NEK3-208ENST00000618534 SOAT2O75908 522 aa20.18■□□□□ 0.82
NEK3-208ENST00000618534 MLYCDO95822 493 aa20.18■□□□□ 0.82
NEK3-208ENST00000618534 MBL2P11226 248 aaPredicted RBP20.18■□□□□ 0.82
NEK3-208ENST00000618534 PCNAP12004 261 aa20.18■□□□□ 0.82
NEK3-208ENST00000618534 CCNA2P20248 432 aa20.18■□□□□ 0.82
NEK3-208ENST00000618534 OR1E1P30953 314 aa20.18■□□□□ 0.82
NEK3-208ENST00000618534 CDKN1CP49918 316 aaPredicted RBP20.18■□□□□ 0.82
NEK3-208ENST00000618534 BMXP51813 675 aa20.18■□□□□ 0.82
NEK3-208ENST00000618534 ZNF140P52738 457 aaPredicted RBP20.18■□□□□ 0.82
NEK3-208ENST00000618534 PARP15Q460N3 678 aa20.18■□□□□ 0.82
NEK3-208ENST00000618534 GPRIN3Q6ZVF9 776 aa20.18■□□□□ 0.82
NEK3-208ENST00000618534 NUDT8Q8WV74 236 aa20.18■□□□□ 0.82
NEK3-208ENST00000618534 CNDP2Q96KP4 475 aaKnown RBP20.18■□□□□ 0.82
NEK3-208ENST00000618534 BTN2A3PQ96KV6 586 aa20.18■□□□□ 0.82
NEK3-208ENST00000618534 CDK15Q96Q40 435 aa20.18■□□□□ 0.82
NEK3-208ENST00000618534 MAGEL2Q9UJ55 1249 aa20.18■□□□□ 0.82
NEK3-208ENST00000618534 PCDHB3Q9Y5E6 796 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms