RNA–Protein interactions for RNA: ENST00000618515.4

KIF3A-208, Transcript of kinesin family member 3A, humanhuman

TSL 5 BASIC

Gene KIF3A, Length 3,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-208ENST00000618515 HIST2H2ACQ16777 129 aaPredicted RBP12.98□□□□□ -0.33
KIF3A-208ENST00000618515 TYSND1Q2T9J0 566 aa12.98□□□□□ -0.33
KIF3A-208ENST00000618515 PYCR3Q53H96 274 aa12.98□□□□□ -0.33
KIF3A-208ENST00000618515 IQSEC1Q6DN90 963 aa12.98□□□□□ -0.33
KIF3A-208ENST00000618515 GLYATQ6IB77 296 aa12.98□□□□□ -0.33
KIF3A-208ENST00000618515 PTGR2Q8N8N7 351 aaPredicted RBP12.98□□□□□ -0.33
KIF3A-208ENST00000618515 SMG8Q8ND04 991 aaKnown RBP12.98□□□□□ -0.33
KIF3A-208ENST00000618515 ZNF555Q8NEP9 628 aa12.98□□□□□ -0.33
KIF3A-208ENST00000618515 YME1L1Q96TA2 773 aa12.98□□□□□ -0.33
KIF3A-208ENST00000618515 YIPF2Q9BWQ6 316 aa12.98□□□□□ -0.33
KIF3A-208ENST00000618515 FSD1LQ9BXM9 530 aa12.98□□□□□ -0.33
KIF3A-208ENST00000618515 KLHL3Q9UH77 587 aa12.98□□□□□ -0.33
KIF3A-208ENST00000618515 BAG5Q9UL15 447 aa12.98□□□□□ -0.33
KIF3A-208ENST00000618515 IFT52Q9Y366 437 aa12.98□□□□□ -0.33
KIF3A-208ENST00000618515 E9PQ18 207 aa12.97□□□□□ -0.33
KIF3A-208ENST00000618515 C1RP00736 705 aa12.97□□□□□ -0.33
KIF3A-208ENST00000618515 ZNF37AP17032 561 aaPredicted RBP12.97□□□□□ -0.33
KIF3A-208ENST00000618515 EEF1DP29692 281 aaKnown RBP12.97□□□□□ -0.33
KIF3A-208ENST00000618515 YBX1P67809 324 aaKnown RBP12.97□□□□□ -0.33
KIF3A-208ENST00000618515 PHC1P78364 1004 aa12.97□□□□□ -0.33
KIF3A-208ENST00000618515 CLCQ05315 142 aa12.97□□□□□ -0.33
KIF3A-208ENST00000618515 PLCL1Q15111 1095 aa12.97□□□□□ -0.33
KIF3A-208ENST00000618515 GRIK4Q16099 956 aa12.97□□□□□ -0.33
KIF3A-208ENST00000618515 Q3C1V9 767 aa12.97□□□□□ -0.33
KIF3A-208ENST00000618515 GPR158Q5T848 1215 aa12.97□□□□□ -0.33
KIF3A-208ENST00000618515 ZNF280DQ6N043 979 aa12.97□□□□□ -0.33
KIF3A-208ENST00000618515 BPIFB6Q8NFQ5 453 aa12.97□□□□□ -0.33
KIF3A-208ENST00000618515 DYNC2LI1Q8TCX1 351 aa12.97□□□□□ -0.33
KIF3A-208ENST00000618515 SLC39A8Q9C0K1 460 aa12.97□□□□□ -0.33
KIF3A-208ENST00000618515 TOR3AQ9H497 397 aa12.97□□□□□ -0.33
KIF3A-208ENST00000618515 PARVBQ9HBI1 364 aa12.97□□□□□ -0.33
KIF3A-208ENST00000618515 CRTAC1Q9NQ79 661 aa12.97□□□□□ -0.33
KIF3A-208ENST00000618515 PCDHGA8Q9Y5G5 932 aa12.97□□□□□ -0.33
KIF3A-208ENST00000618515 LOC285095A0A1B0GVY8 99 aa12.97□□□□□ -0.33
KIF3A-208ENST00000618515 TAF4O00268 1085 aa12.97□□□□□ -0.33
KIF3A-208ENST00000618515 CHRNA1P02708 482 aa12.97□□□□□ -0.33
KIF3A-208ENST00000618515 FUT4P22083 530 aa12.97□□□□□ -0.33
KIF3A-208ENST00000618515 UGT2B10P36537 528 aa12.97□□□□□ -0.33
KIF3A-208ENST00000618515 RPS6KA2Q15349 733 aa12.97□□□□□ -0.33
KIF3A-208ENST00000618515 TUBGCP3Q96CW5 907 aa12.97□□□□□ -0.33
KIF3A-208ENST00000618515 C1orf74Q96LT6 269 aa12.97□□□□□ -0.33
KIF3A-208ENST00000618515 ZNF300Q96RE9 604 aaPredicted RBP12.97□□□□□ -0.33
KIF3A-208ENST00000618515 DUSP21Q9H596 190 aa12.97□□□□□ -0.33
KIF3A-208ENST00000618515 TUT1Q9H6E5 874 aaKnown RBP12.97□□□□□ -0.33
KIF3A-208ENST00000618515 CDH9Q9ULB4 789 aa12.97□□□□□ -0.33
KIF3A-208ENST00000618515 ATP6AP2A0A1C7CYW4 349 aa12.96□□□□□ -0.33
KIF3A-208ENST00000618515 ATP6AP2O75787 350 aa12.96□□□□□ -0.33
KIF3A-208ENST00000618515 SOAT2O75908 522 aa12.96□□□□□ -0.33
KIF3A-208ENST00000618515 DARSP14868 501 aaKnown RBP12.96□□□□□ -0.33
KIF3A-208ENST00000618515 GSSP48637 474 aa12.96□□□□□ -0.33
KIF3A-208ENST00000618515 RABL3Q5HYI8 236 aa12.96□□□□□ -0.33
KIF3A-208ENST00000618515 ZNF362Q5T0B9 420 aaPredicted RBP12.96□□□□□ -0.33
KIF3A-208ENST00000618515 NECAB2Q7Z6G3 386 aa12.96□□□□□ -0.33
KIF3A-208ENST00000618515 ZNF467Q7Z7K2 595 aaPredicted RBP12.96□□□□□ -0.33
KIF3A-208ENST00000618515 ZDHHC13Q8IUH4 622 aa12.96□□□□□ -0.33
KIF3A-208ENST00000618515 DNAJB8Q8NHS0 232 aa12.96□□□□□ -0.33
KIF3A-208ENST00000618515 FAR1Q8WVX9 515 aa12.96□□□□□ -0.33
KIF3A-208ENST00000618515 SYTL2Q9HCH5 934 aa12.96□□□□□ -0.33
KIF3A-208ENST00000618515 NEUROG3Q9Y4Z2 214 aa12.96□□□□□ -0.33
KIF3A-208ENST00000618515 SNX5Q9Y5X3 404 aa12.96□□□□□ -0.33
KIF3A-208ENST00000618515 SLC1A7O00341 560 aa12.96□□□□□ -0.33
KIF3A-208ENST00000618515 CLDN5O00501 218 aa12.96□□□□□ -0.33
KIF3A-208ENST00000618515 CA12O43570 354 aa12.96□□□□□ -0.33
KIF3A-208ENST00000618515 USP2O75604 605 aaPredicted RBP12.96□□□□□ -0.33
KIF3A-208ENST00000618515 PCSK2P16519 638 aa12.96□□□□□ -0.33
KIF3A-208ENST00000618515 CES1P23141 567 aa12.96□□□□□ -0.33
KIF3A-208ENST00000618515 ETFBP38117 255 aa12.96□□□□□ -0.33
KIF3A-208ENST00000618515 YAP1P46937 504 aaKnown RBP12.96□□□□□ -0.33
KIF3A-208ENST00000618515 PPP5CP53041 499 aa12.96□□□□□ -0.33
KIF3A-208ENST00000618515 MAP3K7CLP57077 242 aa12.96□□□□□ -0.33
KIF3A-208ENST00000618515 CHRNB3Q05901 458 aa12.96□□□□□ -0.33
KIF3A-208ENST00000618515 PWP1Q13610 501 aa12.96□□□□□ -0.33
KIF3A-208ENST00000618515 SULT1C3Q6IMI6 304 aa12.96□□□□□ -0.33
KIF3A-208ENST00000618515 ARHGAP36Q6ZRI8 547 aa12.96□□□□□ -0.33
KIF3A-208ENST00000618515 RPS27LQ71UM5 84 aaKnown RBP12.96□□□□□ -0.33
KIF3A-208ENST00000618515 CATSPER4Q7RTX7 472 aa12.96□□□□□ -0.33
KIF3A-208ENST00000618515 TAC4Q86UU9 113 aa12.96□□□□□ -0.33
KIF3A-208ENST00000618515 OR5K1Q8NHB7 308 aa12.96□□□□□ -0.33
KIF3A-208ENST00000618515 STAG3L4Q8TBR4 150 aa12.96□□□□□ -0.33
KIF3A-208ENST00000618515 C17orf50Q8WW18 174 aa12.96□□□□□ -0.33
KIF3A-208ENST00000618515 NODALQ96S42 347 aa12.96□□□□□ -0.33
KIF3A-208ENST00000618515 RBM22Q9NW64 420 aaKnown RBP eCLIP12.96□□□□□ -0.33
KIF3A-208ENST00000618515 SYNJ2BP-COX16A0A087WUM0 186 aa12.96□□□□□ -0.34
KIF3A-208ENST00000618515 SMIM35A0A1B0GVV1 85 aa12.96□□□□□ -0.34
KIF3A-208ENST00000618515 LCHNA4D1U4 455 aa12.96□□□□□ -0.34
KIF3A-208ENST00000618515 SAGE2PA6NJ88 616 aa12.96□□□□□ -0.34
KIF3A-208ENST00000618515 SYCE1LA8MT33 242 aa12.96□□□□□ -0.34
KIF3A-208ENST00000618515 G3V2T6 193 aa12.96□□□□□ -0.34
KIF3A-208ENST00000618515 TPST1O60507 370 aa12.96□□□□□ -0.34
KIF3A-208ENST00000618515 CELF2O95319 508 aaKnown RBP12.96□□□□□ -0.34
KIF3A-208ENST00000618515 EEF1B2P24534 225 aaKnown RBP12.96□□□□□ -0.34
KIF3A-208ENST00000618515 FOXA1P55317 472 aa12.96□□□□□ -0.34
KIF3A-208ENST00000618515 IFITM3Q01628 133 aa12.96□□□□□ -0.34
KIF3A-208ENST00000618515 OR4D1Q15615 310 aa12.96□□□□□ -0.34
KIF3A-208ENST00000618515 UBXN11Q5T124 520 aa12.96□□□□□ -0.34
KIF3A-208ENST00000618515 ANKS6Q68DC2 871 aa12.96□□□□□ -0.34
KIF3A-208ENST00000618515 ZNF549Q6P9A3 640 aa12.96□□□□□ -0.34
KIF3A-208ENST00000618515 RTL3Q8N8U3 475 aaKnown RBP12.96□□□□□ -0.34
KIF3A-208ENST00000618515 AARSD1Q9BTE6 412 aaKnown RBP12.96□□□□□ -0.34
KIF3A-208ENST00000618515 AMBRA1Q9C0C7 1298 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms