RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 VPS28Q9UK41 221 aa3.49□□□□□ -1.85
SMC5-204ENST00000618375 GTF2A1LQ9UNN4 478 aa3.49□□□□□ -1.85
SMC5-204ENST00000618375 COG5Q9UP83 839 aa3.49□□□□□ -1.85
SMC5-204ENST00000618375 GAB2Q9UQC2 676 aa3.49□□□□□ -1.85
SMC5-204ENST00000618375 LIPT1Q9Y234 373 aa3.49□□□□□ -1.85
SMC5-204ENST00000618375 MTF2Q9Y483 593 aaPredicted RBP3.49□□□□□ -1.85
SMC5-204ENST00000618375 SRPRBQ9Y5M8 271 aaKnown RBP3.49□□□□□ -1.85
SMC5-204ENST00000618375 HSPE1-MOB4S4R3N1 261 aa3.49□□□□□ -1.85
SMC5-204ENST00000618375 A3GALT2U3KPV4 340 aa3.49□□□□□ -1.85
SMC5-204ENST00000618375 ZNF609O15014 1411 aa3.49□□□□□ -1.85
SMC5-204ENST00000618375 EDC4Q6P2E9 1401 aaKnown RBP3.49□□□□□ -1.85
SMC5-204ENST00000618375 NAV1Q8NEY1 1877 aa3.49□□□□□ -1.85
SMC5-204ENST00000618375 TET3O43151 1660 aa3.49□□□□□ -1.85
SMC5-204ENST00000618375 USP54Q70EL1 1684 aa3.49□□□□□ -1.85
SMC5-204ENST00000618375 MYH10P35580 1976 aa3.49□□□□□ -1.85
SMC5-204ENST00000618375 ARID1BQ8NFD5 2236 aaPredicted RBP3.48□□□□□ -1.85
SMC5-204ENST00000618375 NCANO14594 1321 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 UTYO14607 1347 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 NFASCO94856 1347 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 IGSF1Q8N6C5 1336 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 RGPD1P0DJD0 1748 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 ERCC6L2Q5T890 1561 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 A0A1W2PRG0 241 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 SLC12A8A0AV02 714 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 PIPSLA2A3N6 862 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 PRR23AA6NEV1 266 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 ZNF729A6NN14 1252 aaPredicted RBP3.48□□□□□ -1.85
SMC5-204ENST00000618375 UPK3BL1B0FP48 263 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 HACD1B0YJ81 288 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 UPK3BL2E5RIL1 263 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 E9PAM4 449 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 I3L521 148 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 EYA2O00167 538 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 DNALI1O14645 258 aaPredicted RBP3.48□□□□□ -1.85
SMC5-204ENST00000618375 NUPL2O15504 423 aaKnown RBP3.48□□□□□ -1.85
SMC5-204ENST00000618375 BUB1O43683 1085 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 TYROBPO43914 113 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 GRIN3BO60391 1043 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 USP12O75317 370 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 TAF5LO75529 589 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 SURF6O75683 361 aaKnown RBP3.48□□□□□ -1.85
SMC5-204ENST00000618375 CDC123O75794 336 aaPredicted RBP3.48□□□□□ -1.85
SMC5-204ENST00000618375 UGT2B17O75795 530 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 PDE9AO76083 593 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 TTC4O95801 387 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 CRYABP02511 175 aaKnown RBP3.48□□□□□ -1.85
SMC5-204ENST00000618375 APOA1P02647 267 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 ESR1P03372 595 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 SERPINB2P05120 415 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 SERPING1P05155 500 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 SERPINA6P08185 405 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 PFKMP08237 780 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 KRT19P08727 400 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 DLDP09622 509 aaKnown RBP3.48□□□□□ -1.85
SMC5-204ENST00000618375 SUPT20HL2P0C7V6 817 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 CYP2D6P10635 497 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 FCGR1AP12314 374 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 IL1R1P14778 569 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 SLC9A1P19634 815 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 TCN1P20061 433 aaPredicted RBP3.48□□□□□ -1.85
SMC5-204ENST00000618375 FGFR2P21802 821 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 FGFR4P22455 802 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 MMP8P22894 467 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 HSD3B2P26439 372 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 CALML3P27482 149 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 CASP1P29466 404 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 CRHR1P34998 444 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 CTNNB1P35222 781 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 GRIA3P42263 894 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 IL12RB1P42701 662 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 ETV4P43268 484 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 SLC15A1P46059 708 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 PSMD8P48556 350 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 MAN2A2P49641 1150 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 HLCSP50747 726 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 TKTL1P51854 596 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 PGDP52209 483 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 SLC7A2P52569 658 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 RIDAP52758 137 aaKnown RBP3.48□□□□□ -1.85
SMC5-204ENST00000618375 SUCLG1P53597 346 aaKnown RBP3.48□□□□□ -1.85
SMC5-204ENST00000618375 RAD23AP54725 363 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 UGT2B15P54855 530 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 MFAP3P55082 362 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 CDH6P55285 790 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 EIF6P56537 245 aaKnown RBP3.48□□□□□ -1.85
SMC5-204ENST00000618375 TGFB2P61812 414 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 HNRNPKP61978 463 aaKnown RBP eCLIP3.48□□□□□ -1.85
SMC5-204ENST00000618375 CDKL1Q00532 357 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 IFITM3Q01628 133 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 RGS1Q08116 209 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 SGCGQ13326 291 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 PPIL2Q13356 520 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 PMS2P3Q13401 168 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 ADAM15Q13444 863 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 SMAD4Q13485 552 aaKnown RBP3.48□□□□□ -1.85
SMC5-204ENST00000618375 MTMR1Q13613 665 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 TRIM25Q14258 630 aaKnown RBP3.48□□□□□ -1.85
SMC5-204ENST00000618375 MXD4Q14582 209 aaPredicted RBP3.48□□□□□ -1.85
SMC5-204ENST00000618375 KCNJ11Q14654 390 aa3.48□□□□□ -1.85
SMC5-204ENST00000618375 PUM1Q14671 1186 aaKnown RBP eCLIP3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms