RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 NPIPA3F8WFD2 350 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 VIPR1P32241 457 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 CDH5P33151 784 aaPredicted RBP3.33□□□□□ -1.88
LPP-220ENST00000617246 GNALP38405 381 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 RGS7P49802 495 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 GPLD1P80108 840 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 SLC30A9Q6PML9 568 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 LPAR4Q99677 370 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 CATSPERZQ9NTU4 200 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 SCHIP1Q9P0W5 487 aaPredicted RBP3.33□□□□□ -1.88
LPP-220ENST00000617246 SLC22A14Q9Y267 594 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 CHUKO15111 745 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 CXCL8P10145 99 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 SERPINB1P30740 379 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 GDI2P50395 445 aaKnown RBP3.33□□□□□ -1.88
LPP-220ENST00000617246 SLC3A1Q07837 685 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 RINLQ6ZS11 566 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 SLC47A2Q86VL8 602 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 MINDY1Q8N5J2 469 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 UBASH3BQ8TF42 649 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 RETREG1Q9H6L5 497 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 DBNLQ9UJU6 430 aaKnown RBP3.33□□□□□ -1.88
LPP-220ENST00000617246 OR5K3A6NET4 321 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 EEF1E1-BLOC1S5C9J1V9 151 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 AQP9O43315 295 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 EEF1E1O43324 174 aaKnown RBP3.33□□□□□ -1.88
LPP-220ENST00000617246 TSPAN1O60635 241 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 SCN2BO60939 215 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 GRK5P34947 590 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 SPRP35270 261 aaPredicted RBP3.33□□□□□ -1.88
LPP-220ENST00000617246 MAGEA1P43355 309 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 MMP13P45452 471 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 ELAVL3Q14576 367 aaKnown RBP3.33□□□□□ -1.88
LPP-220ENST00000617246 CYP27C1Q4G0S4 372 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 SLC25A24Q6NUK1 477 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 SYCE2Q6PIF2 218 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 C3P1Q6ZMU1 363 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 FRMD5Q7Z6J6 570 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 SPEM1Q8N4L4 309 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 MDGA1Q8NFP4 955 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 NSMCE3Q96MG7 304 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 USP28Q96RU2 1077 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 LZTFL1Q9NQ48 299 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 QPCTLQ9NXS2 382 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 FNIP2Q9P278 1114 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 SPATA31D3P0C874 917 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 FPR1P21462 350 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 SSR2P43308 183 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 SLC16A1P53985 500 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 COASYQ13057 564 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 NR1D2Q14995 579 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 ISM2Q6H9L7 571 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 SPATA31D4Q6ZUB0 917 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 CBWD2Q8IUF1 395 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 NATD1Q8N6N6 113 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 RASSF5Q8WWW0 418 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 ZNF578Q96N58 590 aaPredicted RBP3.33□□□□□ -1.88
LPP-220ENST00000617246 NAT9Q9BTE0 207 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 TRIM9Q9C026 710 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 HEY2Q9UBP5 337 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 FBXL3Q9UKT7 428 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 SOX13Q9UN79 622 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 SIPA1L1O43166 1804 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 SKAP2O75563 359 aaPredicted RBP3.33□□□□□ -1.88
LPP-220ENST00000617246 BMI1P35226 326 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 SESN2P58004 480 aaPredicted RBP3.33□□□□□ -1.88
LPP-220ENST00000617246 PRKG2Q13237 762 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 KEAP1Q14145 624 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 PDSS2Q86YH6 399 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 SLC25A41Q8N5S1 370 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 ZNF461Q8TAF7 563 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 CREB3L4Q8TEY5 395 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 NCSTNQ92542 709 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 OR2M4Q96R27 311 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 DECR2Q9NUI1 292 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 ERGIC3Q9Y282 383 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 COMMD3-BMI1R4GMX3 469 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 MUSKO15146 869 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 SELEP16581 610 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 EIF2DP41214 584 aaKnown RBP3.33□□□□□ -1.88
LPP-220ENST00000617246 PROSER3Q2NL68 480 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 RBFAQ8N0V3 343 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 SLC44A3Q8N4M1 653 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 ASCC1Q8N9N2 400 aaKnown RBP3.33□□□□□ -1.88
LPP-220ENST00000617246 NDNFQ8TB73 568 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 PAQR5Q9NXK6 330 aaPredicted RBP3.33□□□□□ -1.88
LPP-220ENST00000617246 TSPAN16Q9UKR8 245 aa3.33□□□□□ -1.88
LPP-220ENST00000617246 CXCR3P49682 368 aa3.32□□□□□ -1.88
LPP-220ENST00000617246 GNB2P62879 340 aa3.32□□□□□ -1.88
LPP-220ENST00000617246 ADAM33Q9BZ11 813 aa3.32□□□□□ -1.88
LPP-220ENST00000617246 ACTR8Q9H981 624 aa3.32□□□□□ -1.88
LPP-220ENST00000617246 TAS2R13Q9NYV9 303 aa3.32□□□□□ -1.88
LPP-220ENST00000617246 PAK5Q9P286 719 aa3.32□□□□□ -1.88
LPP-220ENST00000617246 SMIM23A6NLE4 172 aa3.32□□□□□ -1.88
LPP-220ENST00000617246 LRRC30A6NM36 301 aa3.32□□□□□ -1.88
LPP-220ENST00000617246 BTNL10A8MVZ5 291 aa3.32□□□□□ -1.88
LPP-220ENST00000617246 RGS5O15539 181 aa3.32□□□□□ -1.88
LPP-220ENST00000617246 KCNN4O15554 427 aa3.32□□□□□ -1.88
LPP-220ENST00000617246 RGS14O43566 566 aa3.32□□□□□ -1.88
LPP-220ENST00000617246 FGF1P05230 155 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms