RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 CLIP3Q96DZ5 547 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 CDKN2AIPNLQ96HQ2 116 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 ZNF641Q96N77 438 aaPredicted RBP9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 SEPHS2Q99611 448 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 OSBPL6Q9BZF3 934 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 C8orf33Q9H7E9 229 aaPredicted RBP9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 IPPKQ9H8X2 491 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 SSU72Q9NP77 194 aaKnown RBP9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 KLHL3Q9UH77 587 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 ZNF490Q9ULM2 529 aaPredicted RBP9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 PSMD13Q9UNM6 376 aa9.36□□□□□ -0.91
CLTCL1-208ENST00000615606 SOCS5O75159 536 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 RFPL2O75678 378 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 STC2O76061 302 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 TNFP01375 233 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 FOSL2P15408 326 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 CCR4P51679 360 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 USP39Q53GS9 565 aaKnown RBP9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 WDR45BQ5MNZ6 344 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 MED27Q6P2C8 311 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 TMEM26Q6ZUK4 368 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 BEND5Q7L4P6 421 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 GPRIN1Q7Z2K8 1008 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 C16orf62Q7Z3J2 963 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 ITFG1Q8TB96 612 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 ITCHQ96J02 903 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 TSGA13Q96PP4 275 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 PEBP4Q96S96 227 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 C3orf14Q9HBI5 128 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 GRHL1Q9NZI5 618 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 CCDC189A1A4V9 331 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 TGDSO95455 350 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 ASMTP46597 345 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 RPS7P62081 194 aaKnown RBP9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 ZNF572Q7Z3I7 529 aaPredicted RBP9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 LRRTM4Q86VH4 590 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 EID3Q8N140 333 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 UMODL1-AS1Q8N2C9 162 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 GFM2Q969S9 779 aaKnown RBP9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 LGALS13Q9UHV8 139 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 ADAMTS7Q9UKP4 1686 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 RGSL1A5PLK6 1076 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 C2orf78A6NCI8 922 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 LDLRP01130 860 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 EPOP01588 193 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 SLC35G6P0C7Q6 338 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 GRIA2P42262 883 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 HSPA7P48741 367 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 CYP4F2P78329 520 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 SEMG2Q02383 582 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 LCP2Q13094 533 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 ZFP1Q6P2D0 407 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 TMCO5AQ8N6Q1 288 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 PQLC3Q8N755 202 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 RP9Q8TA86 221 aaKnown RBP9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 PHF21AQ96BD5 680 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 SLC22A18Q96BI1 424 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 TBCDQ9BTW9 1192 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 C1orf50Q9BV19 199 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 MECRQ9BV79 373 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 SLC2A4RGQ9NR83 387 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 MARF1Q9Y4F3 1742 aaKnown RBP9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 MYH8P13535 1937 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 SERPINB10P48595 397 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 ALFQ53S48 1182 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 DCAF12L1Q5VU92 463 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 RNF43Q68DV7 783 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 FAM171BQ6P995 826 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 TTC33Q6PID6 262 aaPredicted RBP9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 ZBTB49Q6ZSB9 765 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 C2orf73Q8N5S3 287 aaPredicted RBP9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 LRTM1Q9HBL6 345 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 SEMA3GQ9NS98 782 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 TCHHQ07283 1943 aa9.35□□□□□ -0.91
CLTCL1-208ENST00000615606 TAF1P21675 1872 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 NBNO60934 754 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 GSRP00390 522 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 PROCP04070 461 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 ENO2P09104 434 aaPredicted RBP9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 TAS2R39P59534 338 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 CLCQ05315 142 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 LMAN2Q12907 356 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 CHRNA6Q15825 494 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 INO80DQ53TQ3 878 aaPredicted RBP9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 CCNYL2Q5T2Q4 361 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 TRIM40Q6P9F5 258 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 KBTBD6Q86V97 674 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 WDTC1Q8N5D0 677 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 POP5Q969H6 163 aaKnown RBP9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 RAB7BQ96AH8 199 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 LMLNQ96KR4 655 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 MARK4Q96L34 752 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 PANX1Q96RD7 426 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 SH3GL3Q99963 347 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 GSDMCQ9BYG8 508 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 RPS6KA6Q9UK32 745 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 KLHL20Q9Y2M5 609 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 POLR3HQ9Y535 204 aaPredicted RBP9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 DYTNA2CJ06 578 aa9.34□□□□□ -0.91
CLTCL1-208ENST00000615606 ZBTB42B2RXF5 422 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms