RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 NPHS1O60500 1241 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 CCNYL3P0C7X3 344 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 GTF2E2P29084 291 aaKnown RBP13.66□□□□□ -0.22
CHD1-212ENST00000614616 ACSM2AQ08AH3 577 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 ACSM2BQ68CK6 577 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 LRRN1Q6UXK5 716 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 ZNF467Q7Z7K2 595 aaPredicted RBP13.66□□□□□ -0.22
CHD1-212ENST00000614616 PHF13Q86YI8 300 aaPredicted RBP13.66□□□□□ -0.22
CHD1-212ENST00000614616 SSX3Q99909 188 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 FANCFQ9NPI8 374 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 ERBB3P21860 1342 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 A0A1B0GVG6 124 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 ISM1B1AKI9 464 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 DHX15O43143 795 aaKnown RBP13.66□□□□□ -0.22
CHD1-212ENST00000614616 B3GALNT1O75752 331 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 ALDH1A2O94788 518 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 HMBSP08397 361 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 TRIM28Q13263 835 aaKnown RBP13.66□□□□□ -0.22
CHD1-212ENST00000614616 PPP2R2DQ66LE6 453 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 EFCAB12Q6NXP0 572 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 BBS12Q6ZW61 710 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 ANKS1BQ7Z6G8 1248 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 LILRB4Q8NHJ6 448 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 TWIST2Q8WVJ9 160 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 NT5C1B-RDH14C9J2C7 533 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 ATP6V0D1P61421 351 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 ADIGQ0VDE8 80 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 ADGRF2Q8IZF7 708 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 CDK5RAP1Q96SZ6 601 aaKnown RBP13.66□□□□□ -0.22
CHD1-212ENST00000614616 MIPEPQ99797 713 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 EPHB6O15197 1021 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 SNX4O95219 450 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 ITGB1P05556 798 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 RFX3P48380 749 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 SLC6A3Q01959 620 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 MBTD1Q05BQ5 628 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 MPZL3Q6UWV2 235 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 DDX53Q86TM3 631 aaKnown RBP13.66□□□□□ -0.22
CHD1-212ENST00000614616 MMAAQ8IVH4 418 aaKnown RBP13.66□□□□□ -0.22
CHD1-212ENST00000614616 ZNF567Q8N184 647 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 WDR48Q8TAF3 677 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 ARL15Q9NXU5 204 aa13.66□□□□□ -0.22
CHD1-212ENST00000614616 TP53BP1Q12888 1972 aaPredicted RBP13.65□□□□□ -0.22
CHD1-212ENST00000614616 RFPL1O75677 317 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 FADDQ13158 208 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 FGL2Q14314 439 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 SEC23AQ15436 765 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 TKFCQ3LXA3 575 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 DEDD2Q8WXF8 326 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 QRFPRQ96P65 431 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 LRRC3Q9BY71 257 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 METTL8Q9H825 291 aaKnown RBP13.65□□□□□ -0.22
CHD1-212ENST00000614616 ARMC1Q9NVT9 282 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 ZNF638Q14966 1978 aaKnown RBP13.65□□□□□ -0.22
CHD1-212ENST00000614616 CACNA1CQ13936 2221 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 GPR75-ASB3A0A0A6YYF3 556 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 FOXO6A8MYZ6 492 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 CHMP24386 653 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 HGSNATQ68CP4 663 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 FAM156AQ8NDB6 213 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 EXOC2Q96KP1 924 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 YIPF2Q9BWQ6 316 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 CAPN10Q9HC96 672 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 ZNF639Q9UID6 485 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 ASB3Q9Y575 518 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 PDCD5O14737 125 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 XPNPEP2O43895 674 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 OR6A2O95222 327 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 SPARCP09486 303 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 KCTD19Q17RG1 926 aaPredicted RBP13.65□□□□□ -0.22
CHD1-212ENST00000614616 SLC2A7Q6PXP3 512 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 ADAMTSL2Q86TH1 951 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 ARMC10Q8N2F6 343 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 TOMM5Q8N4H5 51 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 THAP6Q8TBB0 222 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 ZBTB14O43829 449 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 BCAS2O75934 225 aaPredicted RBP13.65□□□□□ -0.22
CHD1-212ENST00000614616 ZDHHC21Q8IVQ6 265 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 SCUBE3Q8IX30 993 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 RDH12Q96NR8 316 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 MMP19Q99542 508 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 IDI2Q9BXS1 227 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 VPS51Q9UID3 782 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 RNF6Q9Y252 685 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 DFNA5O60443 496 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 ENTPD6O75354 484 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 ITGA10O75578 1167 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 LDOC1O95751 146 aaPredicted RBP13.65□□□□□ -0.22
CHD1-212ENST00000614616 OR56A5P0C7T3 313 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 TSPAN8P19075 237 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 IMPDH1P20839 514 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 GRIA1P42261 906 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 TCEAL5Q5H9L2 206 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 QSOX2Q6ZRP7 698 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 RC3H2Q9HBD1 1191 aaKnown RBP13.65□□□□□ -0.22
CHD1-212ENST00000614616 KLRC4O43908 158 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 UROSP10746 265 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 FMO1Q01740 532 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 GALNT11Q8NCW6 608 aa13.65□□□□□ -0.22
CHD1-212ENST00000614616 HSPA12BQ96MM6 686 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms