RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 POLNQ7Z5Q5 900 aa16.91■□□□□ 0.3
CSNK1E-215ENST00000612795 HPS6Q86YV9 775 aa16.91■□□□□ 0.3
CSNK1E-215ENST00000612795 UBXN4Q92575 508 aa16.91■□□□□ 0.3
CSNK1E-215ENST00000612795 MR1Q95460 341 aa16.91■□□□□ 0.3
CSNK1E-215ENST00000612795 PNPLA2Q96AD5 504 aa16.91■□□□□ 0.3
CSNK1E-215ENST00000612795 CXorf40BQ96DE9 158 aa16.91■□□□□ 0.3
CSNK1E-215ENST00000612795 FCRL4Q96PJ5 515 aa16.91■□□□□ 0.3
CSNK1E-215ENST00000612795 CSPG4P5Q96PW8 444 aa16.91■□□□□ 0.3
CSNK1E-215ENST00000612795 TRIM7Q9C029 511 aa16.91■□□□□ 0.3
CSNK1E-215ENST00000612795 CLSTN2Q9H4D0 955 aa16.91■□□□□ 0.3
CSNK1E-215ENST00000612795 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.91■□□□□ 0.3
CSNK1E-215ENST00000612795 HAUS2Q9NVX0 235 aa16.91■□□□□ 0.3
CSNK1E-215ENST00000612795 SLC5A6Q9Y289 635 aa16.91■□□□□ 0.3
CSNK1E-215ENST00000612795 WIPF3A6NGB9 483 aa16.9■□□□□ 0.3
CSNK1E-215ENST00000612795 GPR89AB7ZAQ6 455 aa16.9■□□□□ 0.3
CSNK1E-215ENST00000612795 CPNE3O75131 537 aaKnown RBP16.9■□□□□ 0.3
CSNK1E-215ENST00000612795 SLC25A14O95258 325 aaPredicted RBP16.9■□□□□ 0.3
CSNK1E-215ENST00000612795 GPR89BP0CG08 455 aa16.9■□□□□ 0.3
CSNK1E-215ENST00000612795 FOLR1P15328 257 aa16.9■□□□□ 0.3
CSNK1E-215ENST00000612795 FERP16591 822 aa16.9■□□□□ 0.3
CSNK1E-215ENST00000612795 RPL10P27635 214 aaKnown RBP16.9■□□□□ 0.3
CSNK1E-215ENST00000612795 ANKRD20A8PQ5CZ79 823 aa16.9■□□□□ 0.3
CSNK1E-215ENST00000612795 ALS2CLQ60I27 953 aa16.9■□□□□ 0.3
CSNK1E-215ENST00000612795 RBM12BQ8IXT5 1001 aaKnown RBP16.9■□□□□ 0.3
CSNK1E-215ENST00000612795 TEX26Q8N6G2 289 aa16.9■□□□□ 0.3
CSNK1E-215ENST00000612795 FDCSPQ8NFU4 85 aa16.9■□□□□ 0.3
CSNK1E-215ENST00000612795 LYSMD1Q96S90 227 aa16.9■□□□□ 0.3
CSNK1E-215ENST00000612795 SPATA16Q9BXB7 569 aa16.9■□□□□ 0.3
CSNK1E-215ENST00000612795 PCDH9Q9HC56 1237 aa16.9■□□□□ 0.3
CSNK1E-215ENST00000612795 EPHA6Q9UF33 1036 aa16.9■□□□□ 0.3
CSNK1E-215ENST00000612795 FARSAQ9Y285 508 aaKnown RBP16.9■□□□□ 0.3
CSNK1E-215ENST00000612795 ADGRG1Q9Y653 693 aa16.9■□□□□ 0.3
CSNK1E-215ENST00000612795 CSMD1Q96PZ7 3565 aa16.9■□□□□ 0.3
CSNK1E-215ENST00000612795 IGHV5-51A0A0C4DH38 117 aa16.89■□□□□ 0.29
CSNK1E-215ENST00000612795 OR52A4PA6NMU1 304 aa16.89■□□□□ 0.29
CSNK1E-215ENST00000612795 KMOO15229 486 aa16.89■□□□□ 0.29
CSNK1E-215ENST00000612795 CEACAM4O75871 244 aa16.89■□□□□ 0.29
CSNK1E-215ENST00000612795 TMEM63AO94886 807 aa16.89■□□□□ 0.29
CSNK1E-215ENST00000612795 EBLN1P0CF75 366 aa16.89■□□□□ 0.29
CSNK1E-215ENST00000612795 LPOP22079 712 aaPredicted RBP16.89■□□□□ 0.29
CSNK1E-215ENST00000612795 CES1P23141 567 aa16.89■□□□□ 0.29
CSNK1E-215ENST00000612795 RPL26P61254 145 aaKnown RBP16.89■□□□□ 0.29
CSNK1E-215ENST00000612795 PPP1CAP62136 330 aa16.89■□□□□ 0.29
CSNK1E-215ENST00000612795 ELOAQ14241 798 aaKnown RBP16.89■□□□□ 0.29
CSNK1E-215ENST00000612795 CDKAL1Q5VV42 579 aa16.89■□□□□ 0.29
CSNK1E-215ENST00000612795 C1QL3Q5VWW1 255 aa16.89■□□□□ 0.29
CSNK1E-215ENST00000612795 LRRTM4Q86VH4 590 aa16.89■□□□□ 0.29
CSNK1E-215ENST00000612795 BPHLQ86WA6 291 aaPredicted RBP16.89■□□□□ 0.29
CSNK1E-215ENST00000612795 TMEM126BQ8IUX1 230 aa16.89■□□□□ 0.29
CSNK1E-215ENST00000612795 SLC41A2Q96JW4 573 aa16.89■□□□□ 0.29
CSNK1E-215ENST00000612795 ZNF514Q96K75 400 aaPredicted RBP16.89■□□□□ 0.29
CSNK1E-215ENST00000612795 TIMM29Q9BSF4 260 aa16.89■□□□□ 0.29
CSNK1E-215ENST00000612795 NUDT9Q9BW91 350 aa16.89■□□□□ 0.29
CSNK1E-215ENST00000612795 RAB33BQ9H082 229 aa16.89■□□□□ 0.29
CSNK1E-215ENST00000612795 TRIM39Q9HCM9 518 aa16.89■□□□□ 0.29
CSNK1E-215ENST00000612795 SLC40A1Q9NP59 571 aa16.89■□□□□ 0.29
CSNK1E-215ENST00000612795 WASH6PQ9NQA3 447 aa16.89■□□□□ 0.29
CSNK1E-215ENST00000612795 FGF21Q9NSA1 209 aa16.89■□□□□ 0.29
CSNK1E-215ENST00000612795 GPR83Q9NYM4 423 aa16.89■□□□□ 0.29
CSNK1E-215ENST00000612795 SLC23A2Q9UGH3 650 aa16.89■□□□□ 0.29
CSNK1E-215ENST00000612795 SNX7Q9UNH6 387 aa16.89■□□□□ 0.29
CSNK1E-215ENST00000612795 RPL26L1Q9UNX3 145 aaKnown RBP16.89■□□□□ 0.29
CSNK1E-215ENST00000612795 PIKFYVEQ9Y2I7 2098 aa16.89■□□□□ 0.29
CSNK1E-215ENST00000612795 DIDO1Q9BTC0 2240 aaKnown RBP16.88■□□□□ 0.29
CSNK1E-215ENST00000612795 RGSL1A5PLK6 1076 aa16.88■□□□□ 0.29
CSNK1E-215ENST00000612795 A6NL46 340 aa16.88■□□□□ 0.29
CSNK1E-215ENST00000612795 ZNF185O15231 689 aa16.88■□□□□ 0.29
CSNK1E-215ENST00000612795 KRT86O43790 486 aa16.88■□□□□ 0.29
CSNK1E-215ENST00000612795 SCRG1O75711 98 aa16.88■□□□□ 0.29
CSNK1E-215ENST00000612795 ZNF7P17097 686 aaPredicted RBP16.88■□□□□ 0.29
CSNK1E-215ENST00000612795 IDSP22304 550 aa16.88■□□□□ 0.29
CSNK1E-215ENST00000612795 IL1R2P27930 398 aa16.88■□□□□ 0.29
CSNK1E-215ENST00000612795 PCK1P35558 622 aa16.88■□□□□ 0.29
CSNK1E-215ENST00000612795 ZNF165P49910 485 aa16.88■□□□□ 0.29
CSNK1E-215ENST00000612795 DRG2P55039 364 aaKnown RBP16.88■□□□□ 0.29
CSNK1E-215ENST00000612795 LAMB3Q13751 1172 aa16.88■□□□□ 0.29
CSNK1E-215ENST00000612795 ZRANB3Q5FWF4 1079 aa16.88■□□□□ 0.29
CSNK1E-215ENST00000612795 CT47A1Q5JQC4 288 aaPredicted RBP16.88■□□□□ 0.29
CSNK1E-215ENST00000612795 ALG1LQ6GMV1 187 aa16.88■□□□□ 0.29
CSNK1E-215ENST00000612795 LRRC49Q8IUZ0 686 aa16.88■□□□□ 0.29
CSNK1E-215ENST00000612795 IQCKQ8N0W5 287 aa16.88■□□□□ 0.29
CSNK1E-215ENST00000612795 RBMXL3Q8N7X1 1067 aaKnown RBP16.88■□□□□ 0.29
CSNK1E-215ENST00000612795 TTC13Q8NBP0 860 aa16.88■□□□□ 0.29
CSNK1E-215ENST00000612795 ZNF653Q96CK0 615 aa16.88■□□□□ 0.29
CSNK1E-215ENST00000612795 C19orf60Q96EN9 201 aa16.88■□□□□ 0.29
CSNK1E-215ENST00000612795 MLPHQ9BV36 600 aaPredicted RBP16.88■□□□□ 0.29
CSNK1E-215ENST00000612795 TRIM10Q9UDY6 481 aa16.88■□□□□ 0.29
CSNK1E-215ENST00000612795 SCINQ9Y6U3 715 aa16.88■□□□□ 0.29
CSNK1E-215ENST00000612795 CROCCQ5TZA2 2017 aa16.87■□□□□ 0.29
CSNK1E-215ENST00000612795 C2CD3Q4AC94 2353 aa16.87■□□□□ 0.29
CSNK1E-215ENST00000612795 SSU72P8A0A1W2PR75 194 aa16.87■□□□□ 0.29
CSNK1E-215ENST00000612795 CHUKO15111 745 aa16.87■□□□□ 0.29
CSNK1E-215ENST00000612795 PRLP01236 227 aa16.87■□□□□ 0.29
CSNK1E-215ENST00000612795 SLC4A1P02730 911 aa16.87■□□□□ 0.29
CSNK1E-215ENST00000612795 BRAFP15056 766 aa16.87■□□□□ 0.29
CSNK1E-215ENST00000612795 IL4RP24394 825 aa16.87■□□□□ 0.29
CSNK1E-215ENST00000612795 HALP42357 657 aa16.87■□□□□ 0.29
CSNK1E-215ENST00000612795 RIPPLY3P57055 190 aa16.87■□□□□ 0.29
CSNK1E-215ENST00000612795 IHHQ14623 411 aa16.87■□□□□ 0.29
CSNK1E-215ENST00000612795 NAA30Q147X3 362 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms