RNA–Protein interactions for RNA: ENST00000612688.1

PPP4R3B-204, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 2

Gene PPP4R3B, Length 2,981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-204ENST00000612688 SEPHS1P49903 392 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 PRKAA1Q13131 559 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 VPS26BQ4G0F5 336 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 REP15Q6BDI9 236 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 SMYD5Q6GMV2 418 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 SLC8B1Q6J4K2 584 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 DEPDC4Q8N2C3 294 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 ESAMQ96AP7 390 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 SLCO4A1Q96BD0 722 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 CCDC68Q9H2F9 335 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 LTB4R2Q9NPC1 389 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 CASS4Q9NQ75 786 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 TANC1Q9C0D5 1861 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 EI24O14681 340 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 PFDN6O15212 129 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 BMP10O95393 424 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 CHEK2O96017 543 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 CNPP09543 421 aaKnown RBP11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 PRSS56P0CW18 603 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 MTHFD1P11586 935 aaKnown RBP11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 HPCAL1P37235 193 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 NSUN2Q08J23 767 aaKnown RBP eCLIP11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 PPIGQ13427 754 aaKnown RBP eCLIP11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 ZNF697Q5TEC3 545 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 UBE2UQ5VVX9 321 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 C17orf80Q9BSJ5 609 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 RNF38Q9H0F5 515 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 ENTPD7Q9NQZ7 604 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 MRGBPQ9NV56 204 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 YIPF1Q9Y548 306 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 NLRC5Q86WI3 1866 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 C2orf78A6NCI8 922 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 NCF1BA6NI72 391 aaPredicted RBP11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 NCF1CA8MVU1 366 aaPredicted RBP11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 BAIAP3O94812 1187 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 NCF1P14598 390 aaPredicted RBP11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 S100A1P23297 94 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 ARNTP27540 789 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 MAGEA11P43364 429 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 ACADVLP49748 655 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 TUBA4AP68366 448 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 SLC12A1Q13621 1099 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 MOGQ16653 247 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 IMPG1Q17R60 797 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 FAM83EQ2M2I3 478 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 RBM23Q86U06 439 aaKnown RBP11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 ST13P5Q8NFI4 369 aaPredicted RBP11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 FEM1CQ96JP0 617 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 SERPINB11Q96P15 392 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 HBEGFQ99075 208 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 NAT9Q9BTE0 207 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 OSBPL10Q9BXB5 764 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 FSD1LQ9BXM9 530 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 CNOT11Q9UKZ1 510 aaKnown RBP11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 GPSM3Q9Y4H4 160 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 CPQQ9Y646 472 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 HS3ST4Q9Y661 456 aa11.67□□□□□ -0.54
PPP4R3B-204ENST00000612688 PTPRDP23468 1912 aa11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 TRIM64CA6NLI5 447 aa11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 NOTOA8MTQ0 251 aa11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 HIDE1A8MVS5 230 aa11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 KPNA4O00629 521 aaPredicted RBP11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 TRIM38O00635 465 aa11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 MRASO14807 208 aa11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 PER2O15055 1255 aa11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 UBDO15205 165 aa11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 CNTN5O94779 1100 aa11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 ARHGEF15O94989 841 aa11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 ERVFC1P60507 584 aa11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 RAB10P61026 200 aa11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 TNK2Q07912 1038 aa11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 TRIM25Q14258 630 aaKnown RBP11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 INAQ16352 499 aa11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 NHSL2Q5HYW2 709 aa11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 GPR158Q5T848 1215 aa11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 C4orf22Q6V702 233 aa11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 TAS2R42Q7RTR8 314 aa11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 NSUN5Q96P11 429 aaKnown RBP11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 SEPHS2Q99611 448 aa11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 TCF25Q9BQ70 676 aa11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 SMOC2Q9H3U7 446 aa11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 AFF4Q9UHB7 1163 aaKnown RBP11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 A0A0U1RQS6 177 aa11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 TMEM114B3SHH9 223 aa11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 FAM47E-STBD1D6RA91 191 aa11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 UBFD1O14562 309 aaKnown RBP11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 ATP6V1B2P21281 511 aa11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 FOXA1P55317 472 aa11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 PPP1R8Q12972 351 aaKnown RBP11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 POLD3Q15054 466 aaPredicted RBP11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 FAM214AQ32MH5 1076 aa11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 C9orf50Q5SZB4 431 aa11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 PIK3R6Q5UE93 754 aa11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 BNIPLQ7Z465 357 aa11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 CUZD1Q86UP6 607 aa11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 DDIASQ8IXT1 998 aa11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 CMTR2Q8IYT2 770 aaKnown RBP11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 HM13Q8TCT9 377 aa11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 SLC22A17Q8WUG5 538 aa11.66□□□□□ -0.54
PPP4R3B-204ENST00000612688 STYXQ8WUJ0 223 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms