RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	IRF7	Q92985	503 aa		13.77	□□□□□ -0.21
COPS7B-223	ENST00000611614	TRIB3	Q96RU7	358 aa		13.77	□□□□□ -0.21
COPS7B-223	ENST00000611614	MRPL1	Q9BYD6	325 aa	Known RBP	13.77	□□□□□ -0.21
COPS7B-223	ENST00000611614	CATSPERZ	Q9NTU4	200 aa		13.77	□□□□□ -0.21
COPS7B-223	ENST00000611614	EPS15L1	Q9UBC2	864 aa		13.77	□□□□□ -0.21
COPS7B-223	ENST00000611614	DOCK6	Q96HP0	2047 aa		13.77	□□□□□ -0.21
COPS7B-223	ENST00000611614	TCF3	P15923	654 aa		13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	DPP6	P42658	865 aa		13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	SUOX	P51687	545 aa		13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	HPCA	P84074	193 aa		13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	ARF5	P84085	180 aa		13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	TIAL1	Q01085	375 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	SEMA3A	Q14563	771 aa		13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	UNC50	Q53HI1	259 aa		13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	METTL3	Q86U44	580 aa	Known RBP	13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	TMEM25	Q86YD3	366 aa		13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	METTL25	Q8N6Q8	603 aa		13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	WFDC5	Q8TCV5	224 aa		13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	TRPC4AP	Q8TEL6	797 aa		13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	PTER	Q96BW5	349 aa		13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	CNBD2	Q96M20	576 aa		13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	SPHK2	Q9NRA0	654 aa		13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	IRAK4	Q9NWZ3	460 aa		13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	VPS51	Q9UID3	782 aa		13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	MYO9B	Q13459	2157 aa		13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	CCDC160	A6NGH7	325 aa		13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	TRIM38	O00635	465 aa		13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	UBFD1	O14562	309 aa	Known RBP	13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	INSIG1	O15503	277 aa		13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	GPC4	O75487	556 aa		13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	SUPT7L	O94864	414 aa		13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	PIRT	P0C851	137 aa		13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	RHOA	P61586	193 aa		13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	HERVK_113	P63132	956 aa		13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	LMAN2	Q12907	356 aa		13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	STX5	Q13190	355 aa		13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	MYLK3	Q32MK0	819 aa		13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	VN1R2	Q8NFZ6	395 aa		13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	MIPOL1	Q8TD10	442 aa		13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	PPP1R14B	Q96C90	147 aa		13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	APOL5	Q9BWW9	433 aa		13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	ERVK-6	Q9BXR3	956 aa		13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	GRIP2	Q9C0E4	1043 aa		13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	COPS7B	Q9H9Q2	264 aa	Predicted RBP	13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	MTF2	Q9Y483	593 aa	Predicted RBP	13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	ACTL7A	Q9Y615	435 aa		13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	RANBP2	P49792	3224 aa	Known RBP	13.76	□□□□□ -0.21
COPS7B-223	ENST00000611614	PSMD12	O00232	456 aa	Predicted RBP	13.75	□□□□□ -0.21
COPS7B-223	ENST00000611614	PSMD8	P48556	350 aa		13.75	□□□□□ -0.21
COPS7B-223	ENST00000611614	KCNC3	Q14003	757 aa		13.75	□□□□□ -0.21
COPS7B-223	ENST00000611614	PTK2B	Q14289	1009 aa		13.75	□□□□□ -0.21
COPS7B-223	ENST00000611614	FASTK	Q14296	549 aa	Known RBP	13.75	□□□□□ -0.21
COPS7B-223	ENST00000611614	ZFP28	Q8NHY6	868 aa		13.75	□□□□□ -0.21
COPS7B-223	ENST00000611614	HMGCLL1	Q8TB92	370 aa		13.75	□□□□□ -0.21
COPS7B-223	ENST00000611614	EXOC2	Q96KP1	924 aa		13.75	□□□□□ -0.21
COPS7B-223	ENST00000611614	AARSD1	Q9BTE6	412 aa	Known RBP	13.75	□□□□□ -0.21
COPS7B-223	ENST00000611614	LINC00597	Q9H2U6	94 aa		13.75	□□□□□ -0.21
COPS7B-223	ENST00000611614	ABCB8	Q9NUT2	735 aa		13.75	□□□□□ -0.21
COPS7B-223	ENST00000611614	OR51B4	Q9Y5P0	310 aa		13.75	□□□□□ -0.21
COPS7B-223	ENST00000611614	WNT6	Q9Y6F9	365 aa		13.75	□□□□□ -0.21
COPS7B-223	ENST00000611614	CHD9	Q3L8U1	2897 aa		13.75	□□□□□ -0.21
COPS7B-223	ENST00000611614	STX16-NPEPL1	H3BU86	382 aa		13.75	□□□□□ -0.21
COPS7B-223	ENST00000611614	STC1	P52823	247 aa		13.75	□□□□□ -0.21
COPS7B-223	ENST00000611614	PSME3	P61289	254 aa		13.75	□□□□□ -0.21
COPS7B-223	ENST00000611614	MS4A2	Q01362	244 aa		13.75	□□□□□ -0.21
COPS7B-223	ENST00000611614	CYTH1	Q15438	398 aa		13.75	□□□□□ -0.21
COPS7B-223	ENST00000611614	PPP1R3A	Q16821	1122 aa		13.75	□□□□□ -0.21
COPS7B-223	ENST00000611614	TYSND1	Q2T9J0	566 aa		13.75	□□□□□ -0.21
COPS7B-223	ENST00000611614	PLEKHG6	Q3KR16	790 aa		13.75	□□□□□ -0.21
COPS7B-223	ENST00000611614	GET4	Q7L5D6	327 aa	Predicted RBP	13.75	□□□□□ -0.21
COPS7B-223	ENST00000611614	GPR149	Q86SP6	731 aa		13.75	□□□□□ -0.21
COPS7B-223	ENST00000611614	APCDD1	Q8J025	514 aa		13.75	□□□□□ -0.21
COPS7B-223	ENST00000611614	TMEM102	Q8N9M5	508 aa	Predicted RBP	13.75	□□□□□ -0.21
COPS7B-223	ENST00000611614	CDKN2AIPNL	Q96HQ2	116 aa		13.75	□□□□□ -0.21
COPS7B-223	ENST00000611614	ASB2	Q96Q27	587 aa		13.75	□□□□□ -0.21
COPS7B-223	ENST00000611614	PKP2	Q99959	881 aa		13.75	□□□□□ -0.21
COPS7B-223	ENST00000611614	INTS10	Q9NVR2	710 aa	Known RBP	13.75	□□□□□ -0.21
COPS7B-223	ENST00000611614	NLE1	Q9NVX2	485 aa	Predicted RBP	13.75	□□□□□ -0.21
COPS7B-223	ENST00000611614	POLR3B	Q9NW08	1133 aa	Predicted RBP	13.75	□□□□□ -0.21
COPS7B-223	ENST00000611614	DUS2	Q9NX74	493 aa	Known RBP	13.75	□□□□□ -0.21
COPS7B-223	ENST00000611614	ARIH1	Q9Y4X5	557 aa	Predicted RBP	13.75	□□□□□ -0.21
COPS7B-223	ENST00000611614	ACOT8	O14734	319 aa		13.74	□□□□□ -0.21
COPS7B-223	ENST00000611614	TYR	P14679	529 aa		13.74	□□□□□ -0.21
COPS7B-223	ENST00000611614	ARSA	P15289	507 aa		13.74	□□□□□ -0.21
COPS7B-223	ENST00000611614	ZNF37A	P17032	561 aa	Predicted RBP	13.74	□□□□□ -0.21
COPS7B-223	ENST00000611614	PSMC3	P17980	439 aa		13.74	□□□□□ -0.21
COPS7B-223	ENST00000611614	WEE1	P30291	646 aa		13.74	□□□□□ -0.21
COPS7B-223	ENST00000611614	PDAP1	Q13442	181 aa	Known RBP	13.74	□□□□□ -0.21
COPS7B-223	ENST00000611614	AGK	Q53H12	422 aa		13.74	□□□□□ -0.21
COPS7B-223	ENST00000611614	LY6G5C	Q5SRR4	150 aa		13.74	□□□□□ -0.21
COPS7B-223	ENST00000611614	CLEC6A	Q6EIG7	209 aa		13.74	□□□□□ -0.21
COPS7B-223	ENST00000611614	RAB44	Q7Z6P3	723 aa	Predicted RBP	13.74	□□□□□ -0.21
COPS7B-223	ENST00000611614	ADGRG2	Q8IZP9	1017 aa		13.74	□□□□□ -0.21
COPS7B-223	ENST00000611614	CLYBL	Q8N0X4	340 aa		13.74	□□□□□ -0.21
COPS7B-223	ENST00000611614	LILRA2	Q8N149	483 aa		13.74	□□□□□ -0.21
COPS7B-223	ENST00000611614	RYBP	Q8N488	228 aa	Predicted RBP	13.74	□□□□□ -0.21
COPS7B-223	ENST00000611614	PAF1	Q8N7H5	531 aa		13.74	□□□□□ -0.21
COPS7B-223	ENST00000611614	EFHB	Q8N7U6	833 aa		13.74	□□□□□ -0.21
COPS7B-223	ENST00000611614	RHEBL1	Q8TAI7	183 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms