RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 ANGPTL3Q9Y5C1 460 aa15.85■□□□□ 0.13
RTN1-209ENST00000611068 SNX13Q9Y5W8 968 aa15.85■□□□□ 0.13
RTN1-209ENST00000611068 H0YJX3 145 aa15.84■□□□□ 0.13
RTN1-209ENST00000611068 NOL3O60936 208 aaKnown RBP15.84■□□□□ 0.13
RTN1-209ENST00000611068 RFPL1O75677 317 aa15.84■□□□□ 0.13
RTN1-209ENST00000611068 LINC00271P0C7V0 271 aa15.84■□□□□ 0.13
RTN1-209ENST00000611068 ERVK-10P10266 1014 aa15.84■□□□□ 0.13
RTN1-209ENST00000611068 MBL2P11226 248 aaPredicted RBP15.84■□□□□ 0.13
RTN1-209ENST00000611068 GLDCP23378 1020 aa15.84■□□□□ 0.13
RTN1-209ENST00000611068 DNAJB1P25685 340 aa15.84■□□□□ 0.13
RTN1-209ENST00000611068 ARRB2P32121 409 aa15.84■□□□□ 0.13
RTN1-209ENST00000611068 CHRNA4P43681 627 aa15.84■□□□□ 0.13
RTN1-209ENST00000611068 PTK2BQ14289 1009 aa15.84■□□□□ 0.13
RTN1-209ENST00000611068 LSMEM2Q8N112 164 aa15.84■□□□□ 0.13
RTN1-209ENST00000611068 ARNTL2Q8WYA1 636 aa15.84■□□□□ 0.13
RTN1-209ENST00000611068 DHRS9Q9BPW9 319 aa15.84■□□□□ 0.13
RTN1-209ENST00000611068 ATP13A3Q9H7F0 1226 aa15.84■□□□□ 0.13
RTN1-209ENST00000611068 ENTPD7Q9NQZ7 604 aa15.84■□□□□ 0.13
RTN1-209ENST00000611068 CHRAC1Q9NRG0 131 aa15.84■□□□□ 0.13
RTN1-209ENST00000611068 HCFC1R1Q9NWW0 138 aa15.84■□□□□ 0.13
RTN1-209ENST00000611068 PLXNA3P51805 1871 aa15.84■□□□□ 0.13
RTN1-209ENST00000611068 SOCS2O14508 198 aa15.84■□□□□ 0.13
RTN1-209ENST00000611068 TOR1BO14657 336 aa15.84■□□□□ 0.13
RTN1-209ENST00000611068 CCL16O15467 120 aa15.84■□□□□ 0.13
RTN1-209ENST00000611068 HOXC13P31276 330 aa15.84■□□□□ 0.13
RTN1-209ENST00000611068 POLR2IP36954 125 aaKnown RBP15.84■□□□□ 0.13
RTN1-209ENST00000611068 MAGEA3P43357 314 aa15.84■□□□□ 0.13
RTN1-209ENST00000611068 EPHB3P54753 998 aa15.84■□□□□ 0.13
RTN1-209ENST00000611068 GNG2P59768 71 aa15.84■□□□□ 0.13
RTN1-209ENST00000611068 ECT2LQ008S8 904 aa15.84■□□□□ 0.13
RTN1-209ENST00000611068 SUZ12Q15022 739 aaKnown RBP15.84■□□□□ 0.13
RTN1-209ENST00000611068 ZNF697Q5TEC3 545 aa15.84■□□□□ 0.13
RTN1-209ENST00000611068 FAM109BQ6ICB4 259 aaPredicted RBP15.84■□□□□ 0.13
RTN1-209ENST00000611068 LYPD8Q6UX82 237 aa15.84■□□□□ 0.13
RTN1-209ENST00000611068 OR7D4Q8NG98 312 aa15.84■□□□□ 0.13
RTN1-209ENST00000611068 FCRL3Q96P31 734 aaPredicted RBP15.84■□□□□ 0.13
RTN1-209ENST00000611068 NOL11Q9H8H0 719 aaKnown RBP15.84■□□□□ 0.13
RTN1-209ENST00000611068 C12orf4Q9NQ89 552 aa15.84■□□□□ 0.13
RTN1-209ENST00000611068 SMOXQ9NWM0 555 aa15.84■□□□□ 0.13
RTN1-209ENST00000611068 PRPF19Q9UMS4 504 aaKnown RBP15.84■□□□□ 0.13
RTN1-209ENST00000611068 PTPRSQ13332 1948 aa15.84■□□□□ 0.13
RTN1-209ENST00000611068 NYNRINQ9P2P1 1898 aaKnown RBP15.84■□□□□ 0.13
RTN1-209ENST00000611068 PRRC2BQ5JSZ5 2229 aaKnown RBP15.84■□□□□ 0.13
RTN1-209ENST00000611068 F5H5T6 163 aa15.83■□□□□ 0.13
RTN1-209ENST00000611068 ACOT8O14734 319 aa15.83■□□□□ 0.13
RTN1-209ENST00000611068 BCAS2O75934 225 aaPredicted RBP15.83■□□□□ 0.13
RTN1-209ENST00000611068 STC2O76061 302 aa15.83■□□□□ 0.13
RTN1-209ENST00000611068 IGLV3-27P01718 113 aa15.83■□□□□ 0.13
RTN1-209ENST00000611068 CCNCP24863 283 aa15.83■□□□□ 0.13
RTN1-209ENST00000611068 CTNNB1P35222 781 aa15.83■□□□□ 0.13
RTN1-209ENST00000611068 GMPRP36959 345 aa15.83■□□□□ 0.13
RTN1-209ENST00000611068 PRKAA2P54646 552 aa15.83■□□□□ 0.13
RTN1-209ENST00000611068 POLD3Q15054 466 aaPredicted RBP15.83■□□□□ 0.13
RTN1-209ENST00000611068 SNAP47Q5SQN1 464 aa15.83■□□□□ 0.13
RTN1-209ENST00000611068 MROH9Q5TGP6 573 aa15.83■□□□□ 0.13
RTN1-209ENST00000611068 GLRX5Q86SX6 157 aa15.83■□□□□ 0.13
RTN1-209ENST00000611068 SNX32Q86XE0 403 aa15.83■□□□□ 0.13
RTN1-209ENST00000611068 PNPLA1Q8N8W4 532 aa15.83■□□□□ 0.13
RTN1-209ENST00000611068 TERB1Q8NA31 727 aa15.83■□□□□ 0.13
RTN1-209ENST00000611068 BPIFB6Q8NFQ5 453 aa15.83■□□□□ 0.13
RTN1-209ENST00000611068 FIG4Q92562 907 aa15.83■□□□□ 0.13
RTN1-209ENST00000611068 MFSD3Q96ES6 412 aa15.83■□□□□ 0.13
RTN1-209ENST00000611068 MUC3BQ9H195 1237 aa15.83■□□□□ 0.13
RTN1-209ENST00000611068 IRF2BPLQ9H1B7 796 aa15.83■□□□□ 0.13
RTN1-209ENST00000611068 ZNF195O14628 629 aa15.83■□□□□ 0.12
RTN1-209ENST00000611068 MATN3O15232 486 aa15.83■□□□□ 0.12
RTN1-209ENST00000611068 RFPL2O75678 378 aa15.83■□□□□ 0.12
RTN1-209ENST00000611068 AP2A1O95782 977 aa15.83■□□□□ 0.12
RTN1-209ENST00000611068 CES1P23141 567 aa15.83■□□□□ 0.12
RTN1-209ENST00000611068 GABRR2P28476 465 aa15.83■□□□□ 0.12
RTN1-209ENST00000611068 SLC1A6P48664 564 aa15.83■□□□□ 0.12
RTN1-209ENST00000611068 POU6F1Q14863 301 aa15.83■□□□□ 0.12
RTN1-209ENST00000611068 NPTX1Q15818 432 aa15.83■□□□□ 0.12
RTN1-209ENST00000611068 FASTKD1Q53R41 847 aaKnown RBP15.83■□□□□ 0.12
RTN1-209ENST00000611068 TPGS2Q68CL5 300 aa15.83■□□□□ 0.12
RTN1-209ENST00000611068 PPP4R4Q6NUP7 873 aa15.83■□□□□ 0.12
RTN1-209ENST00000611068 MINDY2Q8NBR6 621 aa15.83■□□□□ 0.12
RTN1-209ENST00000611068 ST13P5Q8NFI4 369 aaPredicted RBP15.83■□□□□ 0.12
RTN1-209ENST00000611068 ZFP90Q8TF47 636 aa15.83■□□□□ 0.12
RTN1-209ENST00000611068 HTRA1Q92743 480 aa15.83■□□□□ 0.12
RTN1-209ENST00000611068 DPF3Q92784 378 aa15.83■□□□□ 0.12
RTN1-209ENST00000611068 MAP6Q96JE9 813 aa15.83■□□□□ 0.12
RTN1-209ENST00000611068 VPS35Q96QK1 796 aa15.83■□□□□ 0.12
RTN1-209ENST00000611068 ZBP1Q9H171 429 aa15.83■□□□□ 0.12
RTN1-209ENST00000611068 SP110Q9HB58 689 aa15.83■□□□□ 0.12
RTN1-209ENST00000611068 PTBP2Q9UKA9 531 aaKnown RBP15.83■□□□□ 0.12
RTN1-209ENST00000611068 INSL6Q9Y581 213 aa15.83■□□□□ 0.12
RTN1-209ENST00000611068 COL4A4P53420 1690 aaPredicted RBP15.83■□□□□ 0.12
RTN1-209ENST00000611068 A0A1W2PRU2 124 aa15.82■□□□□ 0.12
RTN1-209ENST00000611068 M0QX08 132 aa15.82■□□□□ 0.12
RTN1-209ENST00000611068 PER2O15055 1255 aa15.82■□□□□ 0.12
RTN1-209ENST00000611068 IDH3BO43837 385 aa15.82■□□□□ 0.12
RTN1-209ENST00000611068 ACSL4O60488 711 aa15.82■□□□□ 0.12
RTN1-209ENST00000611068 RAMP2O60895 175 aa15.82■□□□□ 0.12
RTN1-209ENST00000611068 GSRP00390 522 aa15.82■□□□□ 0.12
RTN1-209ENST00000611068 ENO3P13929 434 aaPredicted RBP15.82■□□□□ 0.12
RTN1-209ENST00000611068 RHOQP17081 205 aa15.82■□□□□ 0.12
RTN1-209ENST00000611068 KCNA4P22459 653 aa15.82■□□□□ 0.12
RTN1-209ENST00000611068 EEF1DP29692 281 aaKnown RBP15.82■□□□□ 0.12
RTN1-209ENST00000611068 TTKP33981 857 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms